Jatropha Genome Database

JcCB0028271.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0028271.30 + phase: 0 /partial
         (672 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014228 calcium ion binding protein, putative                   842   0.0  
29830.m001456 conserved hypothetical protein                          344   7e-95
29842.m003519 EH-domain-containing protein, putative                   84   2e-16
29640.m000405 EH-domain-containing protein, putative                   73   4e-13

>30170.m014228 calcium ion binding protein, putative
          Length = 1006

 Score =  842 bits (2174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/672 (66%), Positives = 503/672 (74%), Gaps = 22/672 (3%)

Query: 1   MAGQPQGPNMDQFEAYFRRADLDGDGRISGAEAVAFFQGSNLPKQVLAQIWTYADQSRIG 60
           MAGQP   NMDQFEAYFRRADLDGDGRISG EAV FFQG+NLPKQVLAQIW +ADQSR G
Sbjct: 1   MAGQP---NMDQFEAYFRRADLDGDGRISGTEAVNFFQGANLPKQVLAQIWMHADQSRTG 57

Query: 61  FLGRAEFYNALRLVTVAQTKRELTPDIVKAALYGXXXXXXXXXXXNLPATPVLHVPQVNP 120
           FLGR EF+NAL+LVTVAQ+KRELTPDIVKAALYG           NL ATPV    QVNP
Sbjct: 58  FLGRPEFFNALKLVTVAQSKRELTPDIVKAALYGPAAAKIPPPKINLLATPVQ---QVNP 114

Query: 121 VVAASAPQMGTVAPTASQNPGFRGPGVPNPGMNQHYFXXXXXXXXXXXXXXXXGASSHPP 180
           ++  SAPQMG   PT  Q+ GFRGPG+PN G+NQ YF                G +S P 
Sbjct: 115 MMTPSAPQMGAPPPTPVQSLGFRGPGLPNAGINQQYFPSPQSQTMRPPQAIPPGIASRPT 174

Query: 181 QGFISPEFSRGGGMVGNSQAMPTGTAPRPSQAMPTSTAPRPSQLMPSSAPGTSIPTSNIS 240
           QG  +PEFSRG  M+G+SQ +PTGTA RP  +MP          +P+++P  SIPTSNIS
Sbjct: 175 QGITNPEFSRGSSMMGHSQVVPTGTASRPPHSMP----------VPTASP--SIPTSNIS 222

Query: 241 TSWLGGKTSAAMTGPPSTPSATMQPRAQVSMPSQPTANDSKALVASGNGFSTHSSFGSDG 300
           T WLGGK+S A++GPPSTP+ T+Q + Q SMPSQP+A DSKA V SGNGF+T SSFG+D 
Sbjct: 223 TDWLGGKSSLAISGPPSTPNVTLQSQTQFSMPSQPSATDSKASVVSGNGFATGSSFGADV 282

Query: 301 FSAISSTRKQDLSIPTYSTTGPSALATAVPASTGVHPPVKSNSLDSLQNAFATQPLGGQL 360
           FSA  STR+Q+ S+P YS++   A AT VPA +G    VKSNSLDSLQ+A+A QPLGGQL
Sbjct: 283 FSATPSTRRQEPSLPLYSSSSAPASATMVPAMSG-GLSVKSNSLDSLQSAYAMQPLGGQL 341

Query: 361 QRAQSLXXXXXXXXXXXXXXXXXXXXXXXIGNLSDNSQLQWPKMKALDIQKYTKVFMEVD 420
           QR QSL                       +GN SDNSQ  WPKMK  D+QKYTKVFMEVD
Sbjct: 342 QRTQSLPTSGQQVSTSVSSSVASPSISVGVGNSSDNSQPPWPKMKPSDVQKYTKVFMEVD 401

Query: 421 TDRDGRITGEQARNLFLSWGLPREVLKQVWXXXXXXXXXXXXXREFCFALYLMEQYMAGR 480
           TDRDGRITGEQARNLFLSW LPREVLKQVW             REFCFALYLME+Y  G 
Sbjct: 402 TDRDGRITGEQARNLFLSWRLPREVLKQVWDLSDQDSDSMLSLREFCFALYLMERYREGL 461

Query: 481 SLPSSLPSNVMLDETLLSMTGQPKVAYGNAAWGPRPGFGMQPGMVTQPIAPATGLRPPVP 540
            LP+SLPS++M DETLLSMTGQPK+ +GNAAWGP PGFG QPGM  + +APATGLRPPV 
Sbjct: 462 RLPASLPSSIMFDETLLSMTGQPKLIHGNAAWGPNPGFGQQPGMGARSMAPATGLRPPVQ 521

Query: 541 VTAPQAKPDGVMISNQQKPRAPVLEDSFRNQSDEGVQNSLPQDGTVSEKKVDEPEKVILD 600
           V    A+PD V+ISNQQKPRAP LEDSF NQSD G QNS+  DGT SE KV E EKVILD
Sbjct: 522 VA---AQPDSVLISNQQKPRAPALEDSFLNQSDTGGQNSMQTDGTASENKVGESEKVILD 578

Query: 601 SKEKIEFYRTKMQDLVLYKSRCENKLNEITERALADKREAEMLGKKYEEKYKQVAEVASK 660
           SKEKIEFYR+KMQDLVLYKSRC+N+LNEITERALADKREAE+LGKKYEEKYKQVAEVASK
Sbjct: 579 SKEKIEFYRSKMQDLVLYKSRCDNRLNEITERALADKREAEILGKKYEEKYKQVAEVASK 638

Query: 661 LTIEEATYREIQ 672
           LTIEEAT+R+IQ
Sbjct: 639 LTIEEATFRDIQ 650


>29830.m001456 conserved hypothetical protein
          Length = 595

 Score =  344 bits (883), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 250/610 (40%), Positives = 308/610 (50%), Gaps = 94/610 (15%)

Query: 11  DQFEAYFRRADLDGDGRISGAEAVAFFQGSNLPKQVLAQIWTYADQSRIGFLGRAEFYNA 70
           D F+ YF+RADLD DG+ISGAEAVAFFQGS LPKQVLAQ+WTYADQ + GFL R EFYNA
Sbjct: 6   DLFDVYFKRADLDCDGQISGAEAVAFFQGSGLPKQVLAQVWTYADQRKAGFLSRQEFYNA 65

Query: 71  LRLVTVAQTKRELTPDIVKAALYGXXXXXXXXXXXNLPATPVLHVPQVNPVVAASAPQMG 130
           L+LVTVAQ+KR+LTPD+ KAALYG           NL ATP        P  A  APQ+ 
Sbjct: 66  LKLVTVAQSKRDLTPDMAKAALYGPASAKIPAPQINLAATPAPRAAAPAPRAATPAPQIA 125

Query: 131 TVAPTASQNPGFRGPGVP-NPGMNQHYFXXXXXXXXXXXXXXXXGASSHPPQ--GFISPE 187
                ASQN G R P VP N   NQ YF                     PPQ   F+ P 
Sbjct: 126 GTTSVASQNIGIRPPQVPVNASTNQQYF---------------------PPQQNQFMRPP 164

Query: 188 FSRGGGMVGNSQAMPTGTAPRPSQAMPTSTAPRPSQLMPSSAPGTSIPTSNISTSWLGGK 247
                      Q MP  +   P Q +     PR   +   +AP   +P SN+ST W GG 
Sbjct: 165 -----------QGMPVNSMSHPQQMLANQGVPRGGNM---TAP--RLPNSNVSTGWPGGS 208

Query: 248 TSAAMTG-------PPSTPSA----------TMQPRAQV---------------SMPSQP 275
                T        PP+T             +MQPR QV               ++PS  
Sbjct: 209 LGTETTQNQSRGVIPPATRDGFGLMASGITPSMQPRPQVTSGQTPSTTTTPQDAAVPSNQ 268

Query: 276 TANDSKALVASGNGFSTHSSFGSDGFSAISSTRKQDLSIPTYSTTGPSALATAVPASTGV 335
           +A  +K +  SGNGF+++S FG D FS   +   Q  S    S +        V +S G 
Sbjct: 269 SA--TKDVKVSGNGFASNSLFG-DVFSVGPAQPAQSSSSAAPSASVLPVSLPIVTSSVGS 325

Query: 336 HPPVKSNSLDSLQNAFATQPLGGQLQRAQSLXXXXXXXXXXXXXXXXXXXXXXXIGNLSD 395
            P V+ ++LD+LQNAF+ + +GG       L                        GN + 
Sbjct: 326 QPSVRPSTLDTLQNAFSQRSVGG-------LSTAIENKSVAAQTSNVTPGISVGAGNSAS 378

Query: 396 N-SQLQWPKMKALDIQKYTKVFMEVDTDRDGRITGEQARNLFLSWGLPREVLKQVWXXXX 454
           N SQ  WPKM   DIQKY KVF++VDTDRDG+ITGEQARNLFLSW LPREVLKQVW    
Sbjct: 379 NQSQAPWPKMTQSDIQKYMKVFVQVDTDRDGKITGEQARNLFLSWRLPREVLKQVWDLSD 438

Query: 455 XXXXXXXXXREFCFALYLMEQYMAGRSLPSSLPSNVMLDETLLSMTGQPKVAYGNAAWGP 514
                    REFC ALYLME+   GR+LP+ LPS++M DETLLS T  P  ++G+ AWG 
Sbjct: 439 QDNDSMLSLREFCTALYLMERSREGRTLPTILPSSIMSDETLLSATSHPTASHGSGAWGS 498

Query: 515 RPGFGMQPGMVTQPIAPATGLRPPVPVT----APQAKPDGVMISNQQKPRAPVLEDSFRN 570
                 QP ++  P         P        A + +P       QQKP+ PVLE+   +
Sbjct: 499 ASVL-RQPQVMPGPRPTPAAAARPPRPPPVHHADEKQP------GQQKPKVPVLENHLVD 551

Query: 571 QSDEGVQNSL 580
           Q  +  Q+SL
Sbjct: 552 QLSQDEQDSL 561



 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 9   NMDQFEAYFRRADLDGDGRISGAEAVAFFQGSNLPKQVLAQIWTYADQSRIGFLGRAEFY 68
           ++ ++   F + D D DG+I+G +A   F    LP++VL Q+W  +DQ     L   EF 
Sbjct: 392 DIQKYMKVFVQVDTDRDGKITGEQARNLFLSWRLPREVLKQVWDLSDQDNDSMLSLREFC 451

Query: 69  NALRLVTVAQTKRELTPDIVKAAL 92
            AL L+  ++  R L P I+ +++
Sbjct: 452 TALYLMERSREGRTL-PTILPSSI 474


>29842.m003519 EH-domain-containing protein, putative
          Length = 545

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 52/78 (66%)

Query: 13 FEAYFRRADLDGDGRISGAEAVAFFQGSNLPKQVLAQIWTYADQSRIGFLGRAEFYNALR 72
          ++ +F  AD DGDGRISG +A  FF  SNL +  L Q+W  AD  R GFLG  EF  AL+
Sbjct: 19 YKDWFNSADSDGDGRISGTDATNFFAFSNLSRHDLKQVWALADSKRQGFLGFTEFIAALQ 78

Query: 73 LVTVAQTKRELTPDIVKA 90
          L+++AQ   E+T D++K+
Sbjct: 79 LISLAQAGHEITSDLLKS 96


>29640.m000405 EH-domain-containing protein, putative
          Length = 550

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 53/89 (59%)

Query: 2  AGQPQGPNMDQFEAYFRRADLDGDGRISGAEAVAFFQGSNLPKQVLAQIWTYADQSRIGF 61
           G     N   +  +F  AD DGDGRI+G +A+ FF  SNL +Q L Q+W  A+  R G+
Sbjct: 8  VGSCSKENQKIYLEWFAFADSDGDGRITGNDAIKFFGMSNLSRQDLKQVWAIANSKRQGY 67

Query: 62 LGRAEFYNALRLVTVAQTKRELTPDIVKA 90
          LG  EF  +++L+++AQ   ++  D++ +
Sbjct: 68 LGFNEFITSMQLISLAQAGHQIAHDLLSS 96