Jatropha Genome Database

JcCB0027381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0027381.10 - phase: 0 /partial
         (137 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29848.m004535 Endosomal P24A protein precursor, putative              244   8e-66
29687.m000568 Endosomal P24A protein precursor, putative              205   6e-54
28694.m000673 Endosomal P24A protein precursor, putative              173   3e-44
29737.m001260 Endosomal P24A protein precursor, putative              121   8e-29
30005.m001247 Endosomal P24A protein precursor, putative              110   2e-25
29780.m001382 transporter, putative                                    70   4e-13
29780.m001384 transporter, putative                                    69   6e-13
29780.m001383 transporter, putative                                    65   7e-12
30055.m001552 transporter, putative                                    63   4e-11
28725.m000315 endomembrane protein emp70, putative                     50   2e-07

>29848.m004535 Endosomal P24A protein precursor, putative
          Length = 645

 Score =  244 bits (624), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 116/136 (85%), Positives = 123/136 (90%), Gaps = 4/136 (2%)

Query: 1   MEPRG-GRSLPLSATICAALAFLILIHGGHCFYLPGVAPEDFVKGDELKVKVNKLTSTKT 59
           MEPRG GRSL   + IC  L+FL LIH  HCFYLPGVAPEDFVKGDELKVKVNKLTSTKT
Sbjct: 3   MEPRGRGRSL---SKICTVLSFLFLIHSAHCFYLPGVAPEDFVKGDELKVKVNKLTSTKT 59

Query: 60  QLPYSYYSLPYCRPTKIVDSAENLGEVLRGDRIENSPYVFKMREQKMCNIVCRLKLDAKT 119
           QLPYSYYSLPYC P+KIVDSAENLGEVLRGDRIENSPYVFKMRE KMCN++CR+K DAKT
Sbjct: 60  QLPYSYYSLPYCHPSKIVDSAENLGEVLRGDRIENSPYVFKMREPKMCNVLCRVKFDAKT 119

Query: 120 VKEFKERIDDEYRVNM 135
           VKEFKE+IDDEYRVNM
Sbjct: 120 VKEFKEKIDDEYRVNM 135


>29687.m000568 Endosomal P24A protein precursor, putative
          Length = 640

 Score =  205 bits (521), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 94/125 (75%), Positives = 106/125 (84%)

Query: 11  LSATICAALAFLILIHGGHCFYLPGVAPEDFVKGDELKVKVNKLTSTKTQLPYSYYSLPY 70
           L+A      A ++++   + FYLPGVAP DF+ GDELKVKVNKLTSTKTQLPYSYYSLPY
Sbjct: 6   LAAKWICFCALVLVVVPCNSFYLPGVAPADFLMGDELKVKVNKLTSTKTQLPYSYYSLPY 65

Query: 71  CRPTKIVDSAENLGEVLRGDRIENSPYVFKMREQKMCNIVCRLKLDAKTVKEFKERIDDE 130
           C P +IVDSAENLGEVLRGDRIENSPYVFKMRE +MC I+CR+ LDAKT KEFKE+IDDE
Sbjct: 66  CHPERIVDSAENLGEVLRGDRIENSPYVFKMREPQMCKILCRITLDAKTAKEFKEKIDDE 125

Query: 131 YRVNM 135
           YRVNM
Sbjct: 126 YRVNM 130


>28694.m000673 Endosomal P24A protein precursor, putative
          Length = 639

 Score =  173 bits (438), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 75/114 (65%), Positives = 91/114 (79%)

Query: 22  LILIHGGHCFYLPGVAPEDFVKGDELKVKVNKLTSTKTQLPYSYYSLPYCRPTKIVDSAE 81
           ++     + FYLPGVAP DF +GD L VKVNKL+STKTQLPY YY L YC+P KI++SAE
Sbjct: 17  VLFFSSAYSFYLPGVAPRDFHRGDPLSVKVNKLSSTKTQLPYDYYYLKYCKPNKILNSAE 76

Query: 82  NLGEVLRGDRIENSPYVFKMREQKMCNIVCRLKLDAKTVKEFKERIDDEYRVNM 135
           NLGEVLRGDRIENS Y F+M E++ C + CR+ LDA++ K FKE+IDDEYRVNM
Sbjct: 77  NLGEVLRGDRIENSKYTFEMMEEQPCKVACRVTLDAESAKNFKEKIDDEYRVNM 130


>29737.m001260 Endosomal P24A protein precursor, putative
          Length = 657

 Score =  121 bits (304), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 57/119 (47%), Positives = 80/119 (67%), Gaps = 2/119 (1%)

Query: 19  LAFLILIHGGHCFYLPGVAPEDFVKGDELKVKVNKLTSTKTQLPYSYYSLPYCRPTK-IV 77
           L   ++   G+ FYLPG  P  +  G+ L VKVN +TS  T++P+SYYSLP+C+P + + 
Sbjct: 12  LTIFLIFQSGYGFYLPGSYPHKYNVGETLSVKVNSITSIDTEMPFSYYSLPFCKPAEGVK 71

Query: 78  DSAENLGEVLRGDRIENSPYVFKMREQKMCNIVCRLK-LDAKTVKEFKERIDDEYRVNM 135
           DSAENLGE+L GDRIENSPY F+M   +    +C+   L A + K  K+RID+ Y+VN+
Sbjct: 72  DSAENLGELLMGDRIENSPYRFRMHVNESEVFLCKTDPLSADSFKLLKKRIDEMYQVNL 130


>30005.m001247 Endosomal P24A protein precursor, putative
          Length = 654

 Score =  110 bits (274), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/120 (45%), Positives = 75/120 (62%), Gaps = 1/120 (0%)

Query: 17  AALAFLILIHGGHCFYLPGVAPEDFVKGDELKVKVNKLTSTKTQLPYSYYSLPYCRPT-K 75
           A+L  ++  H    FYLPG     +  G+++  KVN LTS +T+LP+SYYSLPYC+P  +
Sbjct: 9   ASLLVVLFAHTCSAFYLPGSYMHTYSTGEKIVAKVNSLTSIETELPFSYYSLPYCKPPGR 68

Query: 76  IVDSAENLGEVLRGDRIENSPYVFKMREQKMCNIVCRLKLDAKTVKEFKERIDDEYRVNM 135
           I  SAENLGE+L GD+I+NSPY F+M   +   +     L    VK  K+R  D Y+VNM
Sbjct: 69  IRKSAENLGELLMGDQIDNSPYQFRMNINESVFLCTTPPLSEHEVKLLKQRTRDLYQVNM 128


>29780.m001382 transporter, putative
          Length = 525

 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 43  KGDELKVKVNKLTSTKT-QLPYSYYSLPYCRPTKIVDSAENLGEVLRGDRIENSPYVFKM 101
           +GD + +  NK+         Y Y+ LP+C P  + +  E LGEVL GDR+ ++PY    
Sbjct: 32  EGDPVPLYANKVGPFHNPSETYRYFDLPFCVPDHVKEKKEALGEVLNGDRLVSAPYQLNF 91

Query: 102 REQKMCNIVCRLKLDAKTVKEFKERIDDEYRVNMY 136
           R++K    VCR KL  + V  F+  ID +Y   MY
Sbjct: 92  RDEKSSEGVCRKKLSKEDVAHFRSAIDKDYYFQMY 126


>29780.m001384 transporter, putative
          Length = 588

 Score = 68.9 bits (167), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 44/74 (59%)

Query: 63  YSYYSLPYCRPTKIVDSAENLGEVLRGDRIENSPYVFKMREQKMCNIVCRLKLDAKTVKE 122
           Y Y+ LP+C P  + +  E LGEVL GDR+ ++PY    R++K   +VCR KL  + V  
Sbjct: 56  YRYFDLPFCVPDHLKEKTEALGEVLNGDRLVSAPYKLNFRDEKDTAVVCRKKLTKEEVGR 115

Query: 123 FKERIDDEYRVNMY 136
           F+  +D +Y   MY
Sbjct: 116 FRSAVDKDYYFQMY 129


>29780.m001383 transporter, putative
          Length = 592

 Score = 65.5 bits (158), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 43/74 (58%)

Query: 63  YSYYSLPYCRPTKIVDSAENLGEVLRGDRIENSPYVFKMREQKMCNIVCRLKLDAKTVKE 122
           Y Y+ LP+C P  + +  E LGEVL GDR+ ++PY    R+ K+   VC+ KL  + V +
Sbjct: 54  YRYFDLPFCVPDHLKEKKEALGEVLNGDRLVSAPYTLNFRDDKVSAPVCQKKLSKEDVAQ 113

Query: 123 FKERIDDEYRVNMY 136
           F+  I  +Y   MY
Sbjct: 114 FRSAIAKDYYFQMY 127


>30055.m001552 transporter, putative
          Length = 499

 Score = 62.8 bits (151), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)

Query: 44  GDELKVKVNKLTSTKT-QLPYSYYSLPYCRPTKIVDSAENLGEVLRGDRIENSPYVFKMR 102
           GD + + VNK+         Y YY+ P+C P  ++   E LGEVL GDR+ ++ Y    R
Sbjct: 31  GDHVPLFVNKVGPLHNPSETYPYYNFPFCCPDNVILKKETLGEVLNGDRLSSTLYEANFR 90

Query: 103 EQKMCNIVCRLKLDAKTVKEFKERIDDEYRVNMY 136
           E K    +C+ KL    V  F++ I +++   MY
Sbjct: 91  EDKTGVTLCKKKLKRDEVLRFRDAIVNDFYFQMY 124


>28725.m000315 endomembrane protein emp70, putative
          Length = 602

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 41  FVKGDELKVKVNKLTS-TKTQLPYSYYSLPYCRPTKIVDSA-ENLGEVLRGDRIENSPYV 98
           + + + + + VNK+      Q  Y+YYSLP+C P+         LGEVL G+ + +S   
Sbjct: 44  YQQDESVTLWVNKIGPYNNPQETYNYYSLPFCHPSGSAGHKWGGLGEVLGGNELIDSKID 103

Query: 99  FKMREQKMCNIVCRLKLDAKTVKEFKERIDDEY 131
            K ++      +C L+LD   VK FK+ I++ Y
Sbjct: 104 IKFQKNVERGTICSLELDEARVKIFKDAIENNY 136