Jatropha Genome Database

JcCB0027191.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0027191.20 - phase: 0 /short
         (43 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29738.m001052 methionine aminopeptidase, putative                      89   6e-19
30174.m008848 methionine aminopeptidase, putative                      56   4e-09

>29738.m001052 methionine aminopeptidase, putative
          Length = 365

 Score = 88.6 bits (218), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 40/42 (95%), Positives = 41/42 (97%)

Query: 1   MGSTECLTWPDNWTTLTADGSPAAQFEHTILITRTGAEILTK 42
           MGS EC+TWPDNWTTLTADGSPAAQFEHTILITRTGAEILTK
Sbjct: 323 MGSIECVTWPDNWTTLTADGSPAAQFEHTILITRTGAEILTK 364


>30174.m008848 methionine aminopeptidase, putative
          Length = 397

 Score = 55.8 bits (133), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/33 (66%), Positives = 27/33 (81%)

Query: 9   WPDNWTTLTADGSPAAQFEHTILITRTGAEILT 41
           WPD WT +TADG  +AQFEHT+L+T TG E+LT
Sbjct: 350 WPDGWTAVTADGKRSAQFEHTLLVTETGVEVLT 382