Jatropha Genome Database

JcCB0027191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0027191.10 - phase: 0 
         (258 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29738.m001053 Allene oxide cyclase 3, chloroplast precursor, put...   312   8e-86
27467.m000162 Allene oxide cyclase 4, chloroplast precursor, put...   239   1e-63

>29738.m001053 Allene oxide cyclase 3, chloroplast precursor,
           putative
          Length = 259

 Score =  312 bits (800), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 173/263 (65%), Positives = 192/263 (73%), Gaps = 11/263 (4%)

Query: 1   MAFTSSLTAISSFKLTNPTSHFLPSDRSLKQQGLFHQQNQSLSTQNFKFSIP--QHFSTR 58
           MA T+ L  +SS + +N  +   P  RS KQ G FH +  S STQ FK S    ++FST 
Sbjct: 1   MASTAFLKGMSSLRFSNIVTSHSPF-RSTKQLGFFHSKAFS-STQKFKNSTSHQEYFSTG 58

Query: 59  RCSPKSIVTTAFFS---KLCSESPKRKPAGKVQQLNVYEINERDRDSPAILKLSKKPE-L 114
             S KS  T AFFS       ESP+     K+Q+LNVYEINERDR+SPAILKLSKKP+ L
Sbjct: 59  TSSRKSFATKAFFSTKPASLQESPR---PTKIQELNVYEINERDRESPAILKLSKKPDQL 115

Query: 115 ALGDLVPFTNKLYSGDLQKRFGITAGLCVLIQHVPEKNGDRYEANYSFYFGDYGHISVQG 174
           ALGDLVPFTNKLYSGDL+KR GITAGL VLI+HVPEKNGDRYEA YSFYFGDYGHISVQG
Sbjct: 116 ALGDLVPFTNKLYSGDLKKRLGITAGLSVLIKHVPEKNGDRYEAIYSFYFGDYGHISVQG 175

Query: 175 AYLTYQDTFLAVTGGSGIFEGVYGQVKLQQIVFPYKLFYTFYLKGIPDLPAELLGXXXXX 234
           AYLTY DT+LAVTGG+GIFEGVYGQVKL QIVFPYKLFYTFYLKGIPDLP ELLG     
Sbjct: 176 AYLTYDDTYLAVTGGTGIFEGVYGQVKLHQIVFPYKLFYTFYLKGIPDLPDELLGTPVTP 235

Query: 235 XXXXXXXXXXXXXQPNATILNFT 257
                        QP+ TIL+FT
Sbjct: 236 SLTVEPASTAKAAQPSGTILHFT 258


>27467.m000162 Allene oxide cyclase 4, chloroplast precursor,
           putative
          Length = 263

 Score =  239 bits (609), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 117/173 (67%), Positives = 137/173 (79%), Gaps = 1/173 (0%)

Query: 86  KVQQLNVYEINERDRDSPAILKLSKKPELALGDLVPFTNKLYSGDLQKRFGITAGLCVLI 145
           +VQ+L VYEINERDR SPA L+LS+K   +LGDLVPF+NKLY+GDLQ+R GITAG+C+LI
Sbjct: 90  EVQELCVYEINERDRGSPAYLRLSQKQVNSLGDLVPFSNKLYTGDLQQRIGITAGICILI 149

Query: 146 QHVPEKNGDRYEANYSFYFGDYGHISVQGAYLTYQDTFLAVTGGSGIFEGVYGQVKLQQI 205
           Q+ PE  GDRYEA YSFYFGDYGH++VQG YLT++DT+LAVTGGSGIFEG YGQVKLQQI
Sbjct: 150 QNKPEMKGDRYEAIYSFYFGDYGHLAVQGPYLTFEDTYLAVTGGSGIFEGAYGQVKLQQI 209

Query: 206 VFPYKLFYTFYLKGIP-DLPAELLGXXXXXXXXXXXXXXXXXXQPNATILNFT 257
           VFP+KLFYTFYLKG+  DLP ELL                   QP+AT+ NFT
Sbjct: 210 VFPFKLFYTFYLKGLKTDLPDELLRKPTEPHPAVEPHPDAKACQPHATVANFT 262