Jatropha Genome Database

JcCB0026001.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0026001.10 + phase: 0 
         (372 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29648.m001932 2-oxoisovalerate dehydrogenase, putative                689   0.0  
29992.m001413 2-oxoisovalerate dehydrogenase, putative                604   e-173
29736.m002097 pyruvate dehydrogenase, putative                        148   3e-36
30076.m004445 pyruvate dehydrogenase, putative                        131   5e-31
32234.m000034 pyruvate dehydrogenase, putative                         67   1e-11

>29648.m001932 2-oxoisovalerate dehydrogenase, putative
          Length = 380

 Score =  689 bits (1779), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/379 (85%), Positives = 351/379 (92%), Gaps = 8/379 (2%)

Query: 1   MRFISQSNEKRVPCYRLLDDDGELTENNDFDE--------MYREMVTLQMMDTIFYEAQR 52
           M+FIS S++KRVPCYR+LD++G+L EN+DFDE        MY EMVTLQMMDTIFYEAQR
Sbjct: 1   MKFISGSSQKRVPCYRILDENGDLIENSDFDEVSKEIAVKMYNEMVTLQMMDTIFYEAQR 60

Query: 53  QGRISFYVTSNGEEAINIASAAALGPDDVVLPQYREPGVLLWRGFTLEEFTNQCFGNKAD 112
           QGRISFYVTS GEE+INIASAAAL  DDVVLPQYREPGVLLWRGFTL+EF NQCFGNKAD
Sbjct: 61  QGRISFYVTSIGEESINIASAAALTKDDVVLPQYREPGVLLWRGFTLQEFANQCFGNKAD 120

Query: 113 YGKGRQMPIHYGSKKHNYFTVSSPIATQLPQAVGVAYSLKMDKKDACAVAYIGDGGTSEG 172
           YG+GRQMPIHYGS KHNYFTVSSPIATQLPQAVGVAYSLKM+KKDAC V YIGDGGTSEG
Sbjct: 121 YGRGRQMPIHYGSNKHNYFTVSSPIATQLPQAVGVAYSLKMEKKDACVVTYIGDGGTSEG 180

Query: 173 DFHAALNFAAVMEAPVIFICRNNGWAISTHISEQFRSDGIVVKGQAYGIQSIRVDGNDAL 232
           DFHAALNFAAV EAPVIFICRNNGWAISTHISEQFRSDGIVVKG+AYGIQSIRVDGNDAL
Sbjct: 181 DFHAALNFAAVTEAPVIFICRNNGWAISTHISEQFRSDGIVVKGKAYGIQSIRVDGNDAL 240

Query: 233 AVYKTICAAREIAINEQRPILVEALTYRVGHHSTSDDSTKYRPVNEIEYWKMERNPVNRF 292
           AVY+TI AAR+IA++EQRP+LVEALTYRVGHHSTSDDSTKYRP +EIEYWKM RNPVNRF
Sbjct: 241 AVYRTIRAARQIAVSEQRPVLVEALTYRVGHHSTSDDSTKYRPADEIEYWKMARNPVNRF 300

Query: 293 RKWVERNGWWSDADESEVRSSIRKQLLKAIQVAEKTEKPPLGDLFDDVYDLPPSDLREQE 352
           RKWVERNGWWSD +ESE+RSS+RKQLL+AIQVAEKTEKPPLGD+F DVYD+P S+LREQE
Sbjct: 301 RKWVERNGWWSDKEESELRSSVRKQLLQAIQVAEKTEKPPLGDMFTDVYDIPSSNLREQE 360

Query: 353 KQLRETINRHPHDYPSDVP 371
           KQLRETI+ HP DYPS VP
Sbjct: 361 KQLRETISAHPQDYPSVVP 379


>29992.m001413 2-oxoisovalerate dehydrogenase, putative
          Length = 450

 Score =  604 bits (1558), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 283/380 (74%), Positives = 324/380 (85%), Gaps = 8/380 (2%)

Query: 1   MRFISQSNEKRVPCYRLLDDDGELTENND--------FDEMYREMVTLQMMDTIFYEAQR 52
           MRFIS+S E+R+PCYR+LDD+G+L E+ D          +MY +MVTLQ MDTIFYEAQR
Sbjct: 71  MRFISESPEERIPCYRVLDDNGQLIEDGDNVGVSRHIARKMYCDMVTLQTMDTIFYEAQR 130

Query: 53  QGRISFYVTSNGEEAINIASAAALGPDDVVLPQYREPGVLLWRGFTLEEFTNQCFGNKAD 112
           QGRISFYVT+ GEEAINIASAAAL  DD+V+PQYREPGVLLWRGF+L+EF NQCF NK D
Sbjct: 131 QGRISFYVTAIGEEAINIASAAALTIDDLVVPQYREPGVLLWRGFSLQEFANQCFSNKGD 190

Query: 113 YGKGRQMPIHYGSKKHNYFTVSSPIATQLPQAVGVAYSLKMDKKDACAVAYIGDGGTSEG 172
             KGRQMP HYGSKKHNYFTV+S IA+QLP AVG AYSLKMD +DAC VAY GDGG+SEG
Sbjct: 191 NCKGRQMPAHYGSKKHNYFTVASTIASQLPHAVGAAYSLKMDGRDACVVAYFGDGGSSEG 250

Query: 173 DFHAALNFAAVMEAPVIFICRNNGWAISTHISEQFRSDGIVVKGQAYGIQSIRVDGNDAL 232
           DFHAALNFAAVMEAPVIFICRNNGWAIST +S+QFRSDGIVV+GQAYG++SIRVDGNDAL
Sbjct: 251 DFHAALNFAAVMEAPVIFICRNNGWAISTPVSDQFRSDGIVVRGQAYGVRSIRVDGNDAL 310

Query: 233 AVYKTICAAREIAINEQRPILVEALTYRVGHHSTSDDSTKYRPVNEIEYWKMERNPVNRF 292
           A+Y  + AARE+AINE RPIL+EALTYRVGHHSTSDDSTKYR V+E+E W++ R+PV RF
Sbjct: 311 AMYSAVYAAREMAINEHRPILIEALTYRVGHHSTSDDSTKYRSVDEVEQWRLARDPVMRF 370

Query: 293 RKWVERNGWWSDADESEVRSSIRKQLLKAIQVAEKTEKPPLGDLFDDVYDLPPSDLREQE 352
            KW+E NGWWS+  ESE+RSSIRKQLL  IQVAE+ EKPP+ D+F D+YD+PP  L +QE
Sbjct: 371 LKWIESNGWWSNEAESELRSSIRKQLLNVIQVAERVEKPPVADMFSDIYDVPPPHLCDQE 430

Query: 353 KQLRETINRHPHDYPSDVPL 372
           K LRE I RHP DYP DVPL
Sbjct: 431 KWLREAIKRHPQDYPPDVPL 450


>29736.m002097 pyruvate dehydrogenase, putative
          Length = 399

 Score =  148 bits (374), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 161/321 (50%), Gaps = 10/321 (3%)

Query: 25  TENNDFDEMYREMVTLQMM----DTIFYEAQRQGRISFYVTSNGEEAINIASAAALGPDD 80
           T   +    +R+M T++ M    D+++     +G    Y   +G+EA+ +   AA+   D
Sbjct: 64  TTPQELLSFFRDMATMRRMEIAADSLYKAKLIRGFCHLY---DGQEAVAVGMEAAITKKD 120

Query: 81  VVLPQYREPGVLLWRGFTLEEFTNQCFGNKADYGKGRQMPIHYGSKKHNYFTVSSPIATQ 140
            ++  YR+    + RG T+ +   +  G K    +G+   +H+  K+  ++     +  Q
Sbjct: 121 CIITAYRDHCTFVGRGGTMLQVFAELMGRKDGCSRGKGGSMHFYKKEAGFYGGHGIVGAQ 180

Query: 141 LPQAVGVAYSLKMDKKDACAVAYIGDGGTSEGDFHAALNFAAVMEAPVIFICRNNGWAIS 200
           +P   G+A++ K +K +    A  GDG  ++G    ALN +A+ + PVI +C NN + + 
Sbjct: 181 IPLGCGLAFAQKYNKDETVTFALYGDGAANQGQLFEALNISALWDLPVILVCENNHYGMG 240

Query: 201 THISEQFRSDGIVVKGQAYGIQSIRVDGNDALAVYKTICAAREIAINEQRPILVEALTYR 260
           T      +S     +G    +  ++VDG D LAV +    A+E  + +  P+++E  TYR
Sbjct: 241 TAEWRAAKSPAYYKRGDY--VPGLKVDGMDVLAVKQACKFAKEFVL-KNGPLILEMDTYR 297

Query: 261 VGHHSTSDDSTKYRPVNEIEYWKMERNPVNRFRKWVERNGWWSDADESEVRSSIRKQLLK 320
              HS SD  + YR  +EI   + ER+P+ R RK +  +   ++ +  ++   IRK++  
Sbjct: 298 YHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKVILAHDLATEKELKDMEKEIRKEIDD 357

Query: 321 AIQVAEKTEKPPLGDLFDDVY 341
           AI  A+++  P   +LF +VY
Sbjct: 358 AIAQAKESPMPEPSELFTNVY 378


>30076.m004445 pyruvate dehydrogenase, putative
          Length = 433

 Score =  131 bits (330), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 147/322 (45%), Gaps = 15/322 (4%)

Query: 33  MYREMVTLQ----MMDTIFYEAQRQGRISFYVTSNGEEAINIASAAALGPDDVVLPQYRE 88
           +Y +MV  +    M   ++Y  +  G +  Y   NG+EA++      L  +D V+  YR+
Sbjct: 92  LYEDMVLGRAFEDMCAQMYYRGKMFGFVHLY---NGQEAVSTGFIKLLKKEDSVVSTYRD 148

Query: 89  PGVLLWRGFTLEEFTNQCFGNKADYGKGRQMPIHYGSKKHNYFTVSSPIATQLPQAVGVA 148
               L +G       ++ FG      +G+   +H  SK HN     + I   +P A G A
Sbjct: 149 HVHALSKGVPARAVMSELFGKTTGCCRGQGGSMHMFSKDHNVLGGFAFIGEGIPVATGAA 208

Query: 149 YSLKMDKK------DACAVAYIGDGGTSEGDFHAALNFAAVMEAPVIFICRNNGWAISTH 202
           ++ K  ++      D   +A+ GDG  + G F   LN AA+ + P++F+  NN WAI   
Sbjct: 209 FTSKYRREVLKEDCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMS 268

Query: 203 ISEQFRSDGIVVKGQAYGIQSIRVDGNDALAVYKTICAAREIAINEQRPILVEALTYRVG 262
                    I  KG A+G+  + VDG D L V +    A   A   + P LVE  TYR  
Sbjct: 269 HLRATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPTLVECETYRFR 328

Query: 263 HHSTSDDSTKYRPVNEIEYWKMERNPVNRFRKWVERNGWWSDADESEVRSSIRKQLLKAI 322
            HS +D      P  +  Y    R+P+   +K++  N   S+A+   +   I + +  ++
Sbjct: 329 GHSLADPDELRDPAEKAHY--AARDPITSLKKYIIENSLASEAELKAIEKKIDEVVEDSV 386

Query: 323 QVAEKTEKPPLGDLFDDVYDLP 344
           + A+++  PP   L ++V+  P
Sbjct: 387 EFADESPVPPRSQLLENVFADP 408


>32234.m000034 pyruvate dehydrogenase, putative
          Length = 143

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 1/127 (0%)

Query: 214 VKGQAYGIQSIRVDGNDALAVYKTICAAREIAINEQRPILVEALTYRVGHHSTSDDSTKY 273
           ++G  +GI  ++VDG D  AV      A E   + + PI++E LTYR   HS S D  KY
Sbjct: 16  LRGSGFGIPGVQVDGMDVRAVKAAADEALEHCRSGKGPIILEMLTYRYRGHSMS-DPAKY 74

Query: 274 RPVNEIEYWKMERNPVNRFRKWVERNGWWSDADESEVRSSIRKQLLKAIQVAEKTEKPPL 333
           R  +E++  + E +P+ + +  +   GW S+ +   +   +R  +  +   A+   +P +
Sbjct: 75  RSKDEVQKMRSEHDPIEQVKARLMEQGWASEDELKAIDKDVRDIVADSADFAQNDPEPDV 134

Query: 334 GDLFDDV 340
            +L+ D+
Sbjct: 135 SELYTDI 141