Jatropha Genome Database
- JcCB0025591.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0025591.20 - phase: 0 /partial
(548 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29816.m000677 Auxin efflux carrier component, putative 968 0.0
29662.m000472 Auxin efflux carrier component, putative 573 e-164
30180.m001064 Auxin efflux carrier component, putative 571 e-163
27985.m000882 Auxin efflux carrier component, putative 308 4e-84
30128.m009025 conserved hypothetical protein 182 5e-46
29804.m001502 hypothetical protein 172 4e-43
29822.m003474 conserved hypothetical protein 104 9e-23
>29816.m000677 Auxin efflux carrier component, putative
Length = 646
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/549 (87%), Positives = 494/549 (89%), Gaps = 4/549 (0%)
Query: 1 MISWNDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MI+ DLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS
Sbjct: 1 MITGKDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLVALGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
TN+PY MN RFIAADTLQKIIMLVALG+WTN TKNGSLEWMITIFSLSTLPNTLVMGIPL
Sbjct: 61 TNNPYEMNLRFIAADTLQKIIMLVALGLWTNLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD 180
LIAMY +Y+GSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD
Sbjct: 121 LIAMYDKYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD 180
Query: 181 VVSLDGQDFLETDAEIGDDGKLHVTVRKSNASRRSLGPGSFSALTPRPSNLTGAEIYSLS 240
VVSLDG+DFLETDAEIG+DGKLHVTVRKSNASRRSLGPGSFS LTPRPSNLTGAEIYSLS
Sbjct: 181 VVSLDGRDFLETDAEIGNDGKLHVTVRKSNASRRSLGPGSFSGLTPRPSNLTGAEIYSLS 240
Query: 241 SSRNPTPRGSNFNTSDFYNMMGVQGFPGGRLSNFGPADLYSVQSSRGPTPRPSNFEENCA 300
SSRNPTPRGSNFNTSDFYNMMGVQGFPGGRLSNFGPADLYSVQSSRGPTPRPSNFEENCA
Sbjct: 241 SSRNPTPRGSNFNTSDFYNMMGVQGFPGGRLSNFGPADLYSVQSSRGPTPRPSNFEENCA 300
Query: 301 PMATISSPRFGFYPAQTVPTSYPAPNPEFSSTVSTKNTK-NXXXXXXXXXXXXXXXXXXN 359
PMATISSPRFGFYPAQTVPTSYPAPNPEFS STKNTK N
Sbjct: 301 PMATISSPRFGFYPAQTVPTSYPAPNPEFS---STKNTKNQQQQEQQQPLQQQQQQQNQN 357
Query: 360 TKANHDAKELHMFVWSSSASPVSDVFGGNDFGAPQQPGRSDQGAKEIRMLVADHPQNGES 419
K NHDAKELHMFVWSSSASPVSDVFGGNDFGA QQ GRSDQGAKEIRMLVADHPQNGE+
Sbjct: 358 NKTNHDAKELHMFVWSSSASPVSDVFGGNDFGAAQQSGRSDQGAKEIRMLVADHPQNGET 417
Query: 420 KAIANAGDFPGEDFSFAXXXXXXXXXXXXXXAPGLNKLGSSSTAELHPKVGGPPESGANK 479
KAIA+AGDFPGEDFSFA GLNKLGSSSTAELHPKV G PE+G NK
Sbjct: 418 KAIAHAGDFPGEDFSFAGKGDGEDDEREKDGPTGLNKLGSSSTAELHPKVVGAPETGVNK 477
Query: 480 QMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLISFRWHVAMPKIIKQSISILSDA 539
QMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLI+FRW VAMP IIKQSISILSDA
Sbjct: 478 QMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLIAFRWDVAMPAIIKQSISILSDA 537
Query: 540 GLGMAMFSL 548
GLGMAMFSL
Sbjct: 538 GLGMAMFSL 546
>29662.m000472 Auxin efflux carrier component, putative
Length = 635
Score = 573 bits (1476), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/570 (55%), Positives = 382/570 (67%), Gaps = 55/570 (9%)
Query: 1 MISWNDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MI+ D+Y VL A+VPLYVAMILAYGSVRWWKIF+PDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1 MITGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLVALGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
+NDPYAMN+RFIAAD+LQK+++L AL +W F+K+GSLEWMIT+FSLSTLPNTLVMGIPL
Sbjct: 61 SNDPYAMNYRFIAADSLQKVVILAALFLWQAFSKSGSLEWMITLFSLSTLPNTLVMGIPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD 180
L AMYGE+SGSLMVQ+VVLQ +IWYTL+LF+FEYRGAK+LI EQFPETA SI SF+VDSD
Sbjct: 121 LKAMYGEFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLISEQFPETAGSITSFRVDSD 180
Query: 181 VVSLDGQDFLETDAEIGDDGKLHVTVRKSNAS------RRSLGPGSFSALTPRPSNLTGA 234
VVSL+G++ L+ DAEIGDDGKLHV V++S AS +S G S +++TPR SNLTG
Sbjct: 181 VVSLNGREPLQADAEIGDDGKLHVVVKRSTASSMVSSFNKSQGLNSITSMTPRASNLTGV 240
Query: 235 EIYSLSSSRNPTPRGSNFNTSDFYNMMGVQGF--PGGRLSNF---GPADLYSVQSSRGPT 289
EIYS+ SSR PTPR S+FN +DFY M + G ++F G D+YS+QSS+G T
Sbjct: 241 EIYSVQSSREPTPRASSFNQTDFYAMFASKAASPKHGYTNSFQGSGIGDVYSLQSSKGAT 300
Query: 290 PRPSNFEENCAPMATISS----PRFGFYPAQTVPTSYPAPNPEFSSTVSTKNTKNXXXXX 345
PR SNF+E M I++ R G + + YP PNP FS + S K
Sbjct: 301 PRTSNFDEEM--MLKINNNNGKKRGGRSMSGELFNGYPPPNPMFSGSTSGGMRKK----- 353
Query: 346 XXXXXXXXXXXXXNTKANHDAKELHMFVWSSSASPVSDVFGGNDFGAPQQPGRSDQGAKE 405
T N+ KELHMFVWSSSASPVS+ GN A + + G +
Sbjct: 354 ----------ESGGTMPNN--KELHMFVWSSSASPVSE---GNLRHAVNRAASIEFGDID 398
Query: 406 IRMLVADHPQNGESKAIAN-------AGDFPGEDFSFAXXXXXXXXXXXXXXAPGLNKLG 458
A +N S+A+ AG GE AP +
Sbjct: 399 SSKTAALQNENAASRALHQLSENMSPAGRMNGEK--------DRDMDDQKKFAPNGSPFS 450
Query: 459 SSSTAELHPKVGGPPESGANKQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLIS 518
++ + G + QMPPASVMTRLI+IMVWRKLIRNPNTYSSL G+VWSLIS
Sbjct: 451 CQKKMDMDMEGG---DGSKKHQMPPASVMTRLIIIMVWRKLIRNPNTYSSLFGVVWSLIS 507
Query: 519 FRWHVAMPKIIKQSISILSDAGLGMAMFSL 548
+RW + MP I+ SISILSDAGLGMAMFSL
Sbjct: 508 YRWSIQMPSIVSGSISILSDAGLGMAMFSL 537
>30180.m001064 Auxin efflux carrier component, putative
Length = 613
Score = 571 bits (1472), Expect = e-163, Method: Compositional matrix adjust.
Identities = 324/560 (57%), Positives = 379/560 (67%), Gaps = 80/560 (14%)
Query: 1 MISWNDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MIS DLY VLTAVVPLYVAMILAYGSV+WWKIFSPDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1 MISATDLYHVLTAVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLVALGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
TN+PYAMN+RFIAADTLQK+I+L L IW+ + GSLEW IT+FSLSTLPNTLVMGIPL
Sbjct: 61 TNNPYAMNYRFIAADTLQKVIVLFVLAIWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD 180
L MYG+ SGSLMVQ+VVLQCIIWYTL+LFLFEYRGA++LI EQFP+TA SI+SF+VDSD
Sbjct: 121 LKGMYGDDSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLLIGEQFPDTAGSIISFRVDSD 180
Query: 181 VVSLDGQDFLETDAEIGDDGKLHVTVRKSNA------SRRSLGPGSFSALTPRPSNLTGA 234
++SLDG++ L+T+AE+G+DGKLHVTVRKS + SRRS GP S +LTPRPSNLT
Sbjct: 181 IISLDGREPLQTEAEVGEDGKLHVTVRKSTSSRSEIFSRRSHGPNSGLSLTPRPSNLTNV 240
Query: 235 EIYSLSSSRNPTPRGSNFNTSDFYNMMGVQGFPGGRLSNFGPADLYSVQSSRGPTPRPSN 294
EIYSL SSRNPTPRGS+FN +DFY+M+ G SN P QS+ G P
Sbjct: 241 EIYSLQSSRNPTPRGSSFNHTDFYSMVN-----GKNASNVSPR-----QSNFGNLP---- 286
Query: 295 FEENCAPMATISSPRFGFYPAQTVPTSYPAPNPEFSSTVSTKNTKNXXXXXXXXXXXXXX 354
F+E + + ++T ++YPAP + K N
Sbjct: 287 FDEENGGIGVFGN------VSRTNGSAYPAPPNAGIFSPGAKKKAN-------------- 326
Query: 355 XXXXNTKANHDAKELHMFVWSSSASPVSD----VFGGNDFGAPQQPGRSDQGAKEIRMLV 410
+ K+LHMFVWSSSASPVS+ VF G D G D G
Sbjct: 327 -------GAENGKDLHMFVWSSSASPVSEGGIHVFRGGDHGI-------DLG-------- 364
Query: 411 ADHPQNGESKAIANAGDFPGEDFSFAXXXXXXXXXXXXXXAPGLNKLGSSSTAELHPKVG 470
G + + +F ++FSF P L+KLGSSSTAELHPK G
Sbjct: 365 ------GVAHQKVDYDEFGRDEFSFG---NRPVPNGVDREGPVLSKLGSSSTAELHPKTG 415
Query: 471 --GPPESGANKQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLISFRWHVAMPKI 528
G P + A MPPASVMTRLILIMVWRKLIRNPNTYSSLIGL WSL+SF+ H+ MP I
Sbjct: 416 VDGEPRATA---MPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFKLHIEMPAI 472
Query: 529 IKQSISILSDAGLGMAMFSL 548
I SI+ILS+AGLGMAMFSL
Sbjct: 473 IAGSIAILSNAGLGMAMFSL 492
>27985.m000882 Auxin efflux carrier component, putative
Length = 544
Score = 308 bits (790), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 169/324 (52%), Positives = 225/324 (69%), Gaps = 38/324 (11%)
Query: 1 MISWNDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MI+ +D Y V+ A+VPLY AM++AYGSV+W K+F+P+QCSGINRFVA+FAVP+LSFHFIS
Sbjct: 1 MITADDFYKVMCAMVPLYFAMLVAYGSVKW-KVFTPEQCSGINRFVAVFAVPVLSFHFIS 59
Query: 61 TNDPYAMNFRFIAADTLQKIIMLVALGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
N+PY M+ +FI ADTL K+++L L +W F NG L+W+IT+FS++TLPNTLVMGIPL
Sbjct: 60 KNNPYQMDTKFILADTLSKVLVLAVLSVWAIFF-NGGLDWLITLFSVATLPNTLVMGIPL 118
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFP-ETAASIVSFKVDS 179
L+AMYG+++ SLMVQVVVLQCIIWYTLLLFLFEYR A +LI QFP TAASI ++D+
Sbjct: 119 LMAMYGDFTQSLMVQVVVLQCIIWYTLLLFLFEYRAATLLIKTQFPGPTAASITKIELDT 178
Query: 180 DVVSLDGQDFLETDAEIGDDGKLHVTVRKSNAS--RRSLGPGSFSALTPRPSNLTGAEIY 237
DV+SLDG+D L T++E +G++ V +R+S +S +L S + LTPRPSNL+ AEI+
Sbjct: 179 DVISLDGRDPLRTESETDGNGRIRVRIRRSTSSAPDSALSISSIN-LTPRPSNLSNAEIF 237
Query: 238 SLSSSRNPTPRGSNFN-------------------TSDFYNMMGVQGF-----PGGRLSN 273
S+++ P P ++N ++ G GF RLS
Sbjct: 238 SVNT---PAPF-HDYNIHNPNNIYNLYNNNHGGTNNNEIIICNGDLGFGYRSGTSPRLSG 293
Query: 274 FGPADLYSVQSSRGPTPRPSNFEE 297
+ +D YS+Q PTPR SNF E
Sbjct: 294 YASSDAYSLQ----PTPRASNFNE 313
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 61/70 (87%)
Query: 479 KQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLISFRWHVAMPKIIKQSISILSD 538
++MP A VM RLILI+V RKL RNPNTYSS++GL+WSLISF+W+V MP ++K SI I+SD
Sbjct: 396 QEMPGALVMIRLILIVVGRKLSRNPNTYSSVLGLLWSLISFKWNVGMPSLVKNSIKIISD 455
Query: 539 AGLGMAMFSL 548
AGLGMAMFSL
Sbjct: 456 AGLGMAMFSL 465
>30128.m009025 conserved hypothetical protein
Length = 357
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 112/159 (70%)
Query: 1 MISWNDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MI W D+Y V+ A+VPLYVA++L YGS+RWWKIF+P+Q +NR V F +PL +F F +
Sbjct: 1 MIGWEDVYKVIVAMVPLYVALLLGYGSIRWWKIFTPEQGGAVNRLVCYFTLPLFTFEFTA 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLVALGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
DP+ MN+ FI AD + K I++V L W F+ GS W IT FSLSTL N+LV+G+PL
Sbjct: 61 HVDPFKMNYLFIGADAISKFIIVVVLACWAKFSSKGSYTWSITSFSLSTLTNSLVVGVPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKM 159
+ AMYG + L+VQ V+Q IIW T+LLF+ E+R ++
Sbjct: 121 MKAMYGPMAVDLVVQSSVVQAIIWLTILLFVLEFRRTRL 159
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 498 KLIRNPNTYSSLIGLVWSLISFRWHVAMPKIIKQSISILSDAGLGMAMFSL 548
KL NPN+Y+ ++GLVW+ I+ RWH MP I++ SI I+S AG G AMFS+
Sbjct: 205 KLAMNPNSYACILGLVWAFIANRWHFEMPSIMEGSILIMSKAGTGTAMFSM 255
>29804.m001502 hypothetical protein
Length = 148
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/134 (69%), Positives = 99/134 (73%), Gaps = 19/134 (14%)
Query: 116 MGIPLLIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSF 175
MGIPLLI MY +Y SLMVQ YRGAKMLIMEQFPETAASIV F
Sbjct: 1 MGIPLLIVMYDKYVDSLMVQ------------------YRGAKMLIMEQFPETAASIVLF 42
Query: 176 KVDSDVVSLDGQDFLETDAEIGDDGKLHVTVRKSNASRRSLGPGSFSALTPRPSNLTGAE 235
K+DSDVVSLDG+D LETDA+IG DGKLHV VRKS AS+RSLG GSF LT PSNLTGAE
Sbjct: 43 KMDSDVVSLDGRDLLETDAKIGSDGKLHVAVRKSKASKRSLGHGSFFGLT-HPSNLTGAE 101
Query: 236 IYSLSSSRNPTPRG 249
IY LSSS+NPT R
Sbjct: 102 IYCLSSSQNPTLRA 115
>29822.m003474 conserved hypothetical protein
Length = 313
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 45 FVAIFAVPLLSFHFISTNDPYAMNFRFIAADTLQKIIMLVALGIWTNFTKNGSLEWMITI 104
FVA F++PLLSF IS N+PY MN + I AD LQK++ + L T + G L W+IT
Sbjct: 2 FVAKFSIPLLSFQVISNNNPYKMNLKLIFADFLQKLLAALVLLAITKISSRGRLNWIITG 61
Query: 105 FSLSTLPNTLVMGIPLLIAMYGEYSGSLMVQVVVLQCIIWY 145
SLSTLPNTL++GIPLL AMYG + +L Q+VVLQ ++WY
Sbjct: 62 LSLSTLPNTLILGIPLLKAMYGAEAEAL-SQIVVLQSLVWY 101
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 48/61 (78%)
Query: 488 TRLILIMVWRKLIRNPNTYSSLIGLVWSLISFRWHVAMPKIIKQSISILSDAGLGMAMFS 547
T +IL+ V +KL+RNPN +++L+GL+W+ + FRW V +P I+ +SI ILS GLGMAMFS
Sbjct: 153 TMVILLTVGKKLLRNPNFHATLLGLIWASVHFRWDVKLPDIVDKSIRILSTGGLGMAMFS 212
Query: 548 L 548
L
Sbjct: 213 L 213