Jatropha Genome Database

JcCB0025091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0025091.10 - phase: 0 
         (148 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28653.m000059 pin2-interacting protein x1, putative                   226   3e-60

>28653.m000059 pin2-interacting protein x1, putative
          Length = 405

 Score =  226 bits (576), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 114/145 (78%), Positives = 119/145 (82%), Gaps = 3/145 (2%)

Query: 1   MAAPEAPVCYVGVARASPAFRLMKQMGWEEGEGLGKDKQGIKGYVRVKNKQDTTGVGVEK 60
           MAAPEAP+CYVGVA+ASPAFRLMKQMGWEEGEGLGKDKQGIKGYVRVKNKQDTTGVGV+K
Sbjct: 1   MAAPEAPLCYVGVAKASPAFRLMKQMGWEEGEGLGKDKQGIKGYVRVKNKQDTTGVGVDK 60

Query: 61  PSNWAFDTTQFDSILKRLKVQAAHXXXXXXXXXXXXXXXXXX--XSTGLQEPVVKATRPQ 118
           P+NWAFDTTQFDSILKRLKVQAA                      S   QEP VKATRPQ
Sbjct: 61  PNNWAFDTTQFDSILKRLKVQAAQPTDEVVEKEKDNEEKTKTGLSSDHHQEP-VKATRPQ 119

Query: 119 GRYKRRERGKLVQSYSSKDLEGILV 143
           GRYKRRERGKLVQ+YSSKDLEGILV
Sbjct: 120 GRYKRRERGKLVQAYSSKDLEGILV 144