Jatropha Genome Database

JcCB0024801.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0024801.10 - phase: 0 
         (513 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28333.m000569 serine hydroxymethyltransferase, putative               977   0.0  
29596.m000695 serine hydroxymethyltransferase, putative               913   0.0  
30185.m000949 serine hydroxymethyltransferase, putative               584   e-167
29629.m001438 serine hydroxymethyltransferase, putative               552   e-157
29908.m005955 serine hydroxymethyltransferase, putative               486   e-137
29222.m000393 serine hydroxymethyltransferase, putative               482   e-136

>28333.m000569 serine hydroxymethyltransferase, putative
          Length = 515

 Score =  977 bits (2526), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/513 (91%), Positives = 482/513 (93%)

Query: 1   MAMALRRLSSSFDKPIRPLFNATSVYYKSSLPNEAVYEKEKSGVTWPKQLNAPLEAVDPE 60
           MAMALRRLSSS DKPIRPLFNATS  Y SSLPNEAVYEKEKSG TWPKQLNAPLE VDPE
Sbjct: 3   MAMALRRLSSSIDKPIRPLFNATSHCYMSSLPNEAVYEKEKSGATWPKQLNAPLEVVDPE 62

Query: 61  IADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 120
           IADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA
Sbjct: 63  IADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 122

Query: 121 ETLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLSHG 180
           E+LCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLSHG
Sbjct: 123 ESLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLSHG 182

Query: 181 YQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYS 240
           YQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA LFRPKLIVAGASAYARLYDY 
Sbjct: 183 YQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYE 242

Query: 241 RIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRKG 300
           RIRKVCDKQKAILLADMAHISGLVAAGVIPSPF+YADVVTTTTHKSLRGPRGAMIFYRKG
Sbjct: 243 RIRKVCDKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKG 302

Query: 301 VKEINKQGQQVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLS 360
           VKE+NKQG++VLYD+EDKINQ+VFPGLQGGPHNHTITGLAVALKQATT EYKAYQEQVLS
Sbjct: 303 VKEVNKQGKEVLYDYEDKINQSVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLS 362

Query: 361 NCSKFAETLVEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV 420
           NC+KFA+TL +KGY+LVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV
Sbjct: 363 NCAKFAQTLAQKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV 422

Query: 421 SAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDXXXXXXXXXXXXXXGTKLKDFLAALPN 480
           SAMVPGGIRMGTPALTSRGF+EEDFAKVAEFFD              GTKLKDFLA +P 
Sbjct: 423 SAMVPGGIRMGTPALTSRGFIEEDFAKVAEFFDAAVKLAVKIKGETKGTKLKDFLATIPQ 482

Query: 481 FQPEIAKLRHDVEGYAKQFPTIGFEKETMKYKN 513
           FQ +I KLRH VE YAKQFPTIGFEK TMKYKN
Sbjct: 483 FQSDITKLRHAVEEYAKQFPTIGFEKGTMKYKN 515


>29596.m000695 serine hydroxymethyltransferase, putative
          Length = 513

 Score =  913 bits (2359), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/517 (85%), Positives = 473/517 (91%), Gaps = 8/517 (1%)

Query: 1   MAMALRRLSSSFDKPIR-PLFNAT-SVYYKSSLPNEAVYEKEKSGVTWPKQLNAPLEAVD 58
           MAMALRRLSSS    IR P FNA  S+YY SSLPN AV +KEK+   W KQLN+PLE  D
Sbjct: 1   MAMALRRLSSS----IRTPFFNANGSLYYMSSLPNPAVADKEKAPAAWIKQLNSPLEETD 56

Query: 59  PEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID 118
           PEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID
Sbjct: 57  PEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID 116

Query: 119 MAETLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLS 178
           MAETLCQKRALEAF+LDP KWGVNVQSLSGSPANFQVYTALLKPH+RIMALDLPHGGHLS
Sbjct: 117 MAETLCQKRALEAFQLDPEKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLS 176

Query: 179 HGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYD 238
           HGYQTDTKKISAVSIFFETMPYRL+E+TGYIDY+QLEKSATLFRPKLIVAGASAYARLYD
Sbjct: 177 HGYQTDTKKISAVSIFFETMPYRLDENTGYIDYEQLEKSATLFRPKLIVAGASAYARLYD 236

Query: 239 YSRIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYR 298
           Y+RIRKVCDKQKA++LADMAHISGLVAAGVIPSPFEYAD+VTTTTHKSLRGPRGAMIF+R
Sbjct: 237 YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFR 296

Query: 299 KGVKEINKQGQQVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQV 358
           KGVKEINK+G++V YDFEDKINQAVFPGLQGGPHNHTI+GLAVALKQ  TPEYKAYQEQV
Sbjct: 297 KGVKEINKKGEEVKYDFEDKINQAVFPGLQGGPHNHTISGLAVALKQVMTPEYKAYQEQV 356

Query: 359 LSNCSKFAETLVEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG 418
           L NCSKF+++L+EKGY+LVSGGTENHLVLVNL+NKGIDGSRVEKVLE+VHIAANKNTVPG
Sbjct: 357 LKNCSKFSQSLLEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPG 416

Query: 419 DVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDXXXXXXXXXXXXXXGTKLKDFLAAL 478
           DVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFD              GTKLKDF+A +
Sbjct: 417 DVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDAAVKLALKIKADTKGTKLKDFVATM 476

Query: 479 --PNFQPEIAKLRHDVEGYAKQFPTIGFEKETMKYKN 513
              + Q  IA+LRHDVE YAKQFPT+GFEKETMKYK+
Sbjct: 477 KSSDIQSGIAQLRHDVEEYAKQFPTVGFEKETMKYKD 513


>30185.m000949 serine hydroxymethyltransferase, putative
          Length = 527

 Score =  584 bits (1506), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 286/455 (62%), Positives = 338/455 (74%), Gaps = 14/455 (3%)

Query: 54  LEAVDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 113
           L   DPE+ +IIE EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGG
Sbjct: 81  LSEADPEVREIIEKEKNRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 140

Query: 114 NEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPH 173
           NE+ID  ETLCQ+RAL AF LD  KWGVNVQ LSGSPANF+VYTALL PHDRIM LDLPH
Sbjct: 141 NEHIDELETLCQERALAAFGLDRKKWGVNVQPLSGSPANFEVYTALLNPHDRIMGLDLPH 200

Query: 174 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 233
           GGHLSHG+ T  +++S  SI+FE+MPYRL+ESTG +DYD LEK+A LFRPKLI+AGASAY
Sbjct: 201 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTANLFRPKLIIAGASAY 260

Query: 234 ARLYDYSRIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 293
            R +DY R+RK+ D   A L+ DMAHISGLVAA V+  PFEY D+VTTTTHKSLRGPRG 
Sbjct: 261 PRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVGDPFEYCDIVTTTTHKSLRGPRGG 320

Query: 294 MIFYRKGVKEINKQGQQVL-YDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYK 352
           MIF+RK           +L  D E  IN AVFPGLQGGPHNHTI GLAV LK A +PE+K
Sbjct: 321 MIFFRK---------DTILGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 371

Query: 353 AYQEQVLSNCSKFAETLVEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAAN 412
           AYQ+QV+SNC   A  LVE GY LVSGG++NHLVLV+L+  GIDG+RVEK+L+   I  N
Sbjct: 372 AYQKQVISNCRALAYRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKILDMASITLN 431

Query: 413 KNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDXXXXXXXXXXXXXXGTKLK 472
           KN+VPGD SA+VPGGIR+G+PA+T+RGF E +F   A+F                G+KL+
Sbjct: 432 KNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFIATADFIHEGVQITTEAKKSVSGSKLQ 491

Query: 473 DF--LAALPNFQ--PEIAKLRHDVEGYAKQFPTIG 503
           DF  L A P+F    E++ L+  VE  A QF   G
Sbjct: 492 DFMKLVASPDFSLASEVSDLQTRVEALATQFSIPG 526


>29629.m001438 serine hydroxymethyltransferase, putative
          Length = 471

 Score =  552 bits (1422), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 274/465 (58%), Positives = 335/465 (72%), Gaps = 4/465 (0%)

Query: 51  NAPLEAVDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 110
           N PL+ VDPEI D+IE EK RQ  G+ELI SENFTS +V++A+GS +TNKYSEG PG RY
Sbjct: 9   NTPLQTVDPEIHDLIEKEKRRQCTGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRY 68

Query: 111 YGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALD 170
           YGGNEYID  E LC+ RAL+AF L+P KWGVNVQ  SGSPANF  YTA+L+PHDRIM LD
Sbjct: 69  YGGNEYIDEIENLCRSRALQAFHLEPTKWGVNVQPYSGSPANFAAYTAVLQPHDRIMGLD 128

Query: 171 LPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 229
           LP GGHL+HGY T   KKISA SI+FE++PY++N  TGYIDY++LE+ A  FRP+LI+ G
Sbjct: 129 LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYEKLEEKALDFRPRLIICG 188

Query: 230 ASAYARLYDYSRIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 289
            SAY R +DY++ R V DK  A+LL DMAHISGLVAA    +PFE+ D+VTTTTHKSLRG
Sbjct: 189 GSAYPRDWDYAKFRSVADKCGALLLCDMAHISGLVAAQEAANPFEFCDIVTTTTHKSLRG 248

Query: 290 PRGAMIFYRKGVKEINK-QGQQVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATT 348
           PR  MIFYRKG K   K Q +  +YDFEDKIN +VFP LQGGPHNH I  LAVALKQ+ T
Sbjct: 249 PRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPSLQGGPHNHQIGALAVALKQSMT 308

Query: 349 PEYKAYQEQVLSNCSKFAETLVEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVH 408
           P +KAY +QV +N     + L+ +GY LV+GGTENHLVL +L+  G+ G++VEK+ +  +
Sbjct: 309 PGFKAYAKQVKANAVALGKYLMGQGYKLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCN 368

Query: 409 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDXXXXXXXXXXXXXXG 468
           I  NKN V GD SA+ PGG+R+GTPA+TSRG VE+DF K+ EF                G
Sbjct: 369 ITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEKIGEFL-HRAVSLTLSIQKEHG 427

Query: 469 TKLKDFLAALPNFQPEIAKLRHDVEGYAKQFPTIGFEKETMKYKN 513
             LKDF   L N   +I  L+ DVE ++  F   GF    MKYK+
Sbjct: 428 KLLKDFNKGLVN-NKDIEALKADVEKFSSSFDMPGFLMSEMKYKD 471


>29908.m005955 serine hydroxymethyltransferase, putative
          Length = 567

 Score =  486 bits (1251), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 245/462 (53%), Positives = 310/462 (67%), Gaps = 9/462 (1%)

Query: 51  NAPLEAVDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 110
           N PL   DPEI +I+E EK RQ KG+ELI SENF   +VM+A+GS +TNKYSEG PG+RY
Sbjct: 107 NQPLPFADPEIHEIMEKEKQRQIKGIELIASENFVCRAVMEALGSHLTNKYSEGLPGSRY 166

Query: 111 YGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALD 170
           Y GN+ ID  E++C  RAL AF LD  KWGVNVQ  S + ANF VYT LL P DRIM LD
Sbjct: 167 YTGNQLIDQIESICCNRALVAFGLDSDKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLD 226

Query: 171 LPHGGHLSHGYQT-DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 229
            P GGHLSHGY     KK+SA SIFFE++PY++N  TGYIDYD++E+ A  FRPK+++ G
Sbjct: 227 SPSGGHLSHGYCVPGGKKVSASSIFFESLPYKVNPQTGYIDYDKMEEKAMDFRPKILICG 286

Query: 230 ASAYARLYDYSRIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 289
            S+Y R +DY+R R+V DK  A+L+ DMAHISGLVAA    SPF+Y DVVT+TTHKSLRG
Sbjct: 287 GSSYPREWDYARFRQVADKIGAVLMCDMAHISGLVAAKECASPFDYCDVVTSTTHKSLRG 346

Query: 290 PRGAMIFYRKGVKE------INKQGQQVLYDFEDKINQAVFPGLQGGPHNHTITGLAVAL 343
           PRG +IF+RKG K       +N       YDFE++IN AV P LQGGPHN+ I  LA+AL
Sbjct: 347 PRGGIIFFRKGQKSRKQGNLLNHGDSSSHYDFEERINFAVHPSLQGGPHNNHIAALAIAL 406

Query: 344 KQATTPEYKAYQEQVLSNCSKFAETLVEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKV 403
           KQ  +PEY+ Y +QV  N    A  L+ +   LV+GGT+NHL+L +L   G+ G   EKV
Sbjct: 407 KQVASPEYRTYMQQVKKNARTLASALLRRKCRLVTGGTDNHLLLWDLTTLGLAGKNYEKV 466

Query: 404 LEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDXXXXXXXXXX 463
            E  HI  NK+ + G+  A+  GG+R+GTPA+TSRG +E DF  +A+F            
Sbjct: 467 CEMCHITLNKSAIFGENGAICLGGVRIGTPAMTSRGCLEGDFETIADFL-LRAAQIACAI 525

Query: 464 XXXXGTKLKDFLAALPNFQPEIAKLRHDVEGYAKQFPTIGFE 505
               G   K+FL  L N + +I +LR+ VE +A QF   GF+
Sbjct: 526 QREHGKIQKEFLKGLQNNR-DIVELRNRVETFASQFAMPGFD 566


>29222.m000393 serine hydroxymethyltransferase, putative
          Length = 590

 Score =  482 bits (1240), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 242/463 (52%), Positives = 312/463 (67%), Gaps = 14/463 (3%)

Query: 51  NAPLEAVDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 110
           N P+  +D EI +++E E+ RQ+KG+ELI SENF   +VM+A+GS +TNKYSEG PG RY
Sbjct: 133 NQPISVLDSEIFEMMEKERDRQYKGIELIASENFVCRAVMEALGSHLTNKYSEGAPGLRY 192

Query: 111 YGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALD 170
           YGGN+YID  E LC KRAL+AF LD   WGVNVQ  S + ANF V+T LL P DRIM LD
Sbjct: 193 YGGNQYIDEIEMLCWKRALDAFNLDSENWGVNVQPYSCTSANFAVFTGLLLPGDRIMGLD 252

Query: 171 LPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 229
            P GG+ SHGY   + +K+SA SIFFE++PY++N  TGYID+D+LE+ A  FRPK+++ G
Sbjct: 253 NPSGGNTSHGYYMPSGRKVSAASIFFESLPYKVNPQTGYIDFDKLEERALDFRPKILICG 312

Query: 230 ASAYARLYDYSRIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 289
            S+Y R +DY+R R++ D+  A+LL DMA ISGLVAA    +PF+Y D+VT+TTHKSLRG
Sbjct: 313 GSSYPREWDYARFRQIADRCGAVLLCDMAQISGLVAAKECVNPFDYCDIVTSTTHKSLRG 372

Query: 290 PRGAMIFYRKGVKEINKQGQQV-------LYDFEDKINQAVFPGLQGGPHNHTITGLAVA 342
           PRG +IFYR+G+K   K G  V        YDFE+KIN AVFP LQGGPHN+ I  LA+A
Sbjct: 373 PRGGIIFYRRGMKP-RKMGMLVGQGDDSNYYDFEEKINFAVFPSLQGGPHNNHIAALAIA 431

Query: 343 LKQATTPEYKAYQEQVLSNCSKFAETLVEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEK 402
           LKQ  TPEYKAY +QV  N   FA TL+ +   LV+GGT+NH++L +L+  G+ G   EK
Sbjct: 432 LKQVATPEYKAYMQQVKKNAQAFACTLLRRKCRLVTGGTDNHMLLWDLRPLGLTGKIYEK 491

Query: 403 VLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDXXXXXXXXX 462
           V E  HI  NK  V GD   + PGG+R+GTPA+TSRG +E DF  +A+F           
Sbjct: 492 VCEMCHITVNKIAVFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLKAARIANIL 551

Query: 463 XXXXXGTKLKDFLAALPNFQPEIAKLRHDVEGYAKQFPTIGFE 505
                   LK   +       +I +LR+ VE +A QF   GF+
Sbjct: 552 QREHGKALLKGLQS-----NKDILELRNRVETFATQFAMPGFD 589