Jatropha Genome Database

JcCB0018541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0018541.10 + phase: 1 /partial
         (178 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28355.m000098 Indole-3-acetic acid-amido synthetase GH3.5, putative   262   6e-71
29983.m003242 Indole-3-acetic acid-amido synthetase GH3.5, putative   198   1e-51
28152.m000872 Indole-3-acetic acid-amido synthetase GH3.3, putative   145   1e-35
29970.m001008 Indole-3-acetic acid-amido synthetase GH3.3, putative   138   1e-33
30129.m000366 Indole-3-acetic acid-amido synthetase GH3.17, puta...   136   6e-33
27533.m000079 Indole-3-acetic acid-amido synthetase GH3.6, putative   127   2e-30
30128.m008575 Indole-3-acetic acid-amido synthetase GH3.17, puta...   125   8e-30

>28355.m000098 Indole-3-acetic acid-amido synthetase GH3.5, putative
          Length = 556

 Score =  262 bits (670), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 124/178 (69%), Positives = 137/178 (76%)

Query: 1   LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
            YRYRLGDVVK++GFHNSTPELKFVCR SLLL+INIDKN+EKDL L V+          +
Sbjct: 379 FYRYRLGDVVKVMGFHNSTPELKFVCRRSLLLSINIDKNTEKDLQLVVEEAAKLLADEKL 438

Query: 61  EVVDFSSLVDLSTEPGHYVIFWEINKEPTDEILKECCNCLDRSFLDAGYVSSRKINAIGP 120
           EVVDFSSL D ST+PGHYVIFWEI+ EPT E+L+ECCNCLDRSFLDAGYV+SRK+ AIGP
Sbjct: 439 EVVDFSSLADRSTDPGHYVIFWEISGEPTAEVLQECCNCLDRSFLDAGYVTSRKVKAIGP 498

Query: 121 LELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCVAPTXXXXXXXXXXXXXXXFFSNAF 178
           LELRVV RGTFQKILDHYLGLG  VSQFKTPRCV P                + S AF
Sbjct: 499 LELRVVHRGTFQKILDHYLGLGAAVSQFKTPRCVGPANNVVSQILSNNVAKSYVSTAF 556


>29983.m003242 Indole-3-acetic acid-amido synthetase GH3.5, putative
          Length = 600

 Score =  198 bits (503), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 88/155 (56%), Positives = 114/155 (73%)

Query: 1   LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
           LYRYRLGDVV++ GFH  TP+L F+CR  L+LT+NIDKN+EKDL L V+           
Sbjct: 424 LYRYRLGDVVEVAGFHKGTPKLNFICRRKLILTVNIDKNTEKDLQLVVERGSQLLSKTRA 483

Query: 61  EVVDFSSLVDLSTEPGHYVIFWEINKEPTDEILKECCNCLDRSFLDAGYVSSRKINAIGP 120
           E+VDF+S  D+  +PGHY+I+WEI  E  + +L ECC  +D SF+D GYV SRK ++IGP
Sbjct: 484 ELVDFTSHADVGNQPGHYIIYWEIKGEVEEGVLGECCREMDESFVDHGYVVSRKAHSIGP 543

Query: 121 LELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCVA 155
           LEL +V RGTF+KILDH++G G  +SQFKTPRC +
Sbjct: 544 LELCIVERGTFKKILDHFIGNGAALSQFKTPRCTS 578


>28152.m000872 Indole-3-acetic acid-amido synthetase GH3.3, putative
          Length = 597

 Score =  145 bits (365), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 106/160 (66%), Gaps = 7/160 (4%)

Query: 1   LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
           LYRYR+GD++++ GFHNS P+  FV R ++LL+I+ DK  E +L  AV+           
Sbjct: 409 LYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAVENASQLLREFNT 468

Query: 61  EVVDFSSLVDLSTEPGHYVIFWEI-----NKEPTDEILKECCNCLDRSFLDAGYVSSR-K 114
            VV+++S  D  T PGHYVI+WE+        P++++L +CC+ ++ S L++ Y   R +
Sbjct: 469 SVVEYTSYADTKTIPGHYVIYWELLIKDSANSPSEKVLSQCCHAMEES-LNSVYRQGRVE 527

Query: 115 INAIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
            N+IGPLE+RVV+ GTF++++D+ +  G  ++Q+K PRCV
Sbjct: 528 CNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKVPRCV 567


>29970.m001008 Indole-3-acetic acid-amido synthetase GH3.3, putative
          Length = 598

 Score =  138 bits (347), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 106/161 (65%), Gaps = 7/161 (4%)

Query: 1   LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
           L RYR+GD++++ GFHN+ P+ +F+ R ++LL+I+ DK  E +L  A++           
Sbjct: 409 LNRYRVGDILRVTGFHNAAPQFRFIRRKNVLLSIDSDKTDESELQKAIENASLLLREFNT 468

Query: 61  EVVDFSSLVDLSTEPGHYVIFWEI-----NKEPTDEILKECCNCLDRSFLDAGYVSSRKI 115
            VV+++S  D  T PGHYVI+WE+     +  PT+++L +CC  ++ S L++ Y   R  
Sbjct: 469 SVVEYTSYGDTKTIPGHYVIYWELLIKDPSNSPTEQVLNQCCLAMEES-LNSVYRQGRVA 527

Query: 116 N-AIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCVA 155
           + +IGPLE+RVV+ GTF++++D+ +  G  ++Q+K PRCV+
Sbjct: 528 DSSIGPLEIRVVKNGTFEELMDYAISRGASINQYKVPRCVS 568


>30129.m000366 Indole-3-acetic acid-amido synthetase GH3.17,
           putative
          Length = 597

 Score =  136 bits (342), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 105/165 (63%), Gaps = 12/165 (7%)

Query: 1   LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
           LYRYR+GDV+++ GFHN  P+ +F+CR +++L+I+ DK +E+DLH ++            
Sbjct: 407 LYRYRIGDVLQVTGFHNQAPQFRFICRRNVVLSIDNDKTNEEDLHKSISTAKKLLEPYNA 466

Query: 61  EVVDFSSLVDLSTEPGHYVIFWEI---------NKEPTD-EILKECCNCLDRSFLDAGYV 110
            +V+++S  +    PGHYV++WEI         N+ P D E+ +ECC  ++   LD  Y 
Sbjct: 467 ILVEYTSYAETLVVPGHYVLYWEILHHSSVVNHNQTPLDAEVFQECCIAVEEE-LDYIYR 525

Query: 111 SSRKIN-AIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
             R  + +IGPLE+RVV  GTF+ ++D ++G G  ++Q+KTPRC+
Sbjct: 526 RCRTHDKSIGPLEIRVVEPGTFEALMDLFIGQGGSINQYKTPRCI 570


>27533.m000079 Indole-3-acetic acid-amido synthetase GH3.6, putative
          Length = 612

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 61/159 (38%), Positives = 98/159 (61%), Gaps = 6/159 (3%)

Query: 1   LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
           LYRYR+GDV+++ GF N  P+  F+CR +++L+I+ DK  E +L  AV            
Sbjct: 419 LYRYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDA 478

Query: 61  EVVDFSSLVDLSTEPGHYVIFWEINKEPT----DEILKECCNCLDRSFLDAGYVSSR-KI 115
            + +++S  D ++ PGHYV+FWEI    +      I ++CC  ++ S L++ Y   R   
Sbjct: 479 TLAEYTSYADTTSIPGHYVLFWEITLNGSTPIPPSIFEDCCLTIEES-LNSVYRQGRVSD 537

Query: 116 NAIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
            +IGPLE+++V  GTF K++D+ + LG  ++Q+KTPRCV
Sbjct: 538 KSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCV 576


>30128.m008575 Indole-3-acetic acid-amido synthetase GH3.17,
           putative
          Length = 590

 Score =  125 bits (315), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 103/162 (63%), Gaps = 9/162 (5%)

Query: 1   LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
           LYRYR+GD++ + GF+N+ P+ +FV R +++L+I+ DK +E+DL  AV            
Sbjct: 399 LYRYRVGDILMVTGFYNNAPQFRFVHRRNVVLSIDTDKTNEEDLLKAVTQAKRLLEPLGF 458

Query: 61  EVVDFSSLVDLSTEPGHYVIFWEIN-------KEPTDEILKECCNCLDRSFLDAGYVSSR 113
            + +++S  D S+ PGHYV+FWE+        +E    I+++CC  ++ S LD+ Y   R
Sbjct: 459 LMTEYTSFADTSSIPGHYVLFWELKTRGENVPEELDPIIMEQCCLTVEES-LDSVYRRCR 517

Query: 114 KIN-AIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
           K + +IG LE+RVV+ GTF  ++D  L  G+ V+Q+KTPRC+
Sbjct: 518 KKDKSIGALEIRVVKHGTFDALMDFCLSQGSSVNQYKTPRCI 559