Jatropha Genome Database

JcCB0018351.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0018351.30 - phase: 2 /partial
         (82 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m009166 WRKY transcription factor, putative                     102   3e-23
29635.m000468 WRKY transcription factor, putative                      71   1e-13
29717.m000222 WRKY transcription factor, putative                      50   2e-07
29820.m001029 transcription factor, putative                           50   2e-07
27613.m000639 WRKY transcription factor, putative                      50   3e-07
28966.m000524 conserved hypothetical protein                           47   2e-06

>30174.m009166 WRKY transcription factor, putative
          Length = 468

 Score =  102 bits (255), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/74 (67%), Positives = 62/74 (83%), Gaps = 3/74 (4%)

Query: 12  SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSAELKQQDMEK---QDNRRDLGSNNQ 68
           +ATDP+AV+TTYEGKHNHD+PAAKGS H+  +SNS+ELKQQ++EK    + RRD  +NN+
Sbjct: 395 AATDPRAVVTTYEGKHNHDVPAAKGSSHNIAHSNSSELKQQNVEKNAVNNRRRDSSTNNR 454

Query: 69  QPIARLRLKEGQIT 82
            PIARLRLKE QIT
Sbjct: 455 PPIARLRLKEEQIT 468


>29635.m000468 WRKY transcription factor, putative
          Length = 510

 Score = 70.9 bits (172), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 53/70 (75%), Gaps = 1/70 (1%)

Query: 12  SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSAELKQQDMEKQDNRRDLGSNNQQPI 71
           +A DPKAV+TTYEGKHNHD+PAA+ S H+T N+++ +LK Q +  + +    G+N+++P+
Sbjct: 440 AAADPKAVVTTYEGKHNHDVPAARNSSHNTANNSALQLKPQKVVAEKHPFLFGNNDKRPV 499

Query: 72  ARLRLKEGQI 81
             L+LKE +I
Sbjct: 500 L-LQLKEEEI 508


>29717.m000222 WRKY transcription factor, putative
          Length = 575

 Score = 50.1 bits (118), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/29 (79%), Positives = 26/29 (89%), Gaps = 1/29 (3%)

Query: 15  DPKAVITTYEGKHNHDLPAAKGSIHSTVN 43
           D +AVITTYEGKHNHD+PAA+GS HS VN
Sbjct: 450 DLRAVITTYEGKHNHDVPAARGS-HSAVN 477


>29820.m001029 transcription factor, putative
          Length = 558

 Score = 50.1 bits (118), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/37 (62%), Positives = 31/37 (83%), Gaps = 4/37 (10%)

Query: 15  DPKAVITTYEGKHNHDLPAAKGSIHST----VNSNSA 47
           D +AVITTYEGKHNHD+PAA+GS +++    VN+NS+
Sbjct: 439 DTRAVITTYEGKHNHDVPAARGSGYASNRLPVNANSS 475


>27613.m000639 WRKY transcription factor, putative
          Length = 562

 Score = 49.7 bits (117), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/28 (75%), Positives = 23/28 (82%)

Query: 15  DPKAVITTYEGKHNHDLPAAKGSIHSTV 42
           DPKAVITTYEGKHNHD+P A+ S H T 
Sbjct: 420 DPKAVITTYEGKHNHDVPMARTSSHDTT 447


>28966.m000524 conserved hypothetical protein
          Length = 733

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/33 (69%), Positives = 27/33 (81%), Gaps = 2/33 (6%)

Query: 15  DPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSA 47
           D K+VITTYEGKHNHD+PAA+ S H  VNS S+
Sbjct: 567 DLKSVITTYEGKHNHDVPAARNSSH--VNSGSS 597