Jatropha Genome Database

JcCB0017941.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0017941.30 + phase: 0 
         (388 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30076.m004700 ATP binding protein, putative                           619   e-178
30120.m000361 ATP binding protein, putative                           115   2e-26

>30076.m004700 ATP binding protein, putative
          Length = 382

 Score =  619 bits (1597), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 302/388 (77%), Positives = 336/388 (86%), Gaps = 8/388 (2%)

Query: 1   MKSQLSSSDDDEVDAYPSSPLVTSCWWRSAAKFEECARLKHGFPNISSLTPXXXXXXXXX 60
           MK+QLSSSD+D+   YP S ++  CWWRS AKFEECARLK G PNISSLTP         
Sbjct: 1   MKNQLSSSDEDD---YPPSRMLY-CWWRSTAKFEECARLKLGLPNISSLTPRIRVLRELE 56

Query: 61  XXALIAHEGLNELRYKLQIYRSGDYWVPTGGLKKEEMDIPPIVTILLVGFSSSGKSSLVN 120
             ALI+HEGLNELRYKLQ+Y+SGDYWVPTGG++KEEMDIP ++TILLVGFSSSGKSSLVN
Sbjct: 57  RLALISHEGLNELRYKLQMYKSGDYWVPTGGIEKEEMDIPSVITILLVGFSSSGKSSLVN 116

Query: 121 LMYSVLGRTGLVLFAQTKSGSGKKNYTTMFMEEHNVLRSIKSGFCVYDSRGFNYDKVGEA 180
           LMYSVLGRTGLV FAQT SG G KNYTTM+MEEHNV+RS++SGFCV+DSRGFNYDK+GEA
Sbjct: 117 LMYSVLGRTGLVPFAQTSSG-GAKNYTTMYMEEHNVMRSMQSGFCVFDSRGFNYDKIGEA 175

Query: 181 LEELSSWMSDGVHHNQLCLRSGDHNVLLKDIDAEQLSSRNSSKFIQRRVNCAMVVVNVAE 240
           LEELSSWM+DGVHHNQLCLRSGD  +L  DI+A   +SR+SSKF+ RRVNCAMVVVN+AE
Sbjct: 176 LEELSSWMTDGVHHNQLCLRSGDATLLKDDIEAA--ASRSSSKFLIRRVNCAMVVVNIAE 233

Query: 241 VYKALKAGDSKPLEATKELFCSSALRNCNENPILILTHGDLLTSEERIEGRLKICESLGI 300
           VYKALKAGDSK LEAT+ELFCS ALR CNENPILILTHGDLLT+EERIEGR+KICE LGI
Sbjct: 234 VYKALKAGDSKQLEATRELFCSPALRKCNENPILILTHGDLLTNEERIEGRIKICERLGI 293

Query: 301 SETNGIYDVVCLTEYGFLAEESDPVSAYNVAEAVYRALLISDREHLPKKTLQDWTLFILS 360
            ETNG+YDVVCLTEYGFLAEESDPV+AY VAEAVYRALLISDR H P K  QDW +FILS
Sbjct: 294 QETNGVYDVVCLTEYGFLAEESDPVTAYAVAEAVYRALLISDRGHFPSKKFQDWAIFILS 353

Query: 361 WLMSLMAIFFAFLAQICSALGH-SNKLK 387
           WLMS + I FAFLA+IC+ALG   NKLK
Sbjct: 354 WLMSFLGIVFAFLAEICTALGQRRNKLK 381


>30120.m000361 ATP binding protein, putative
          Length = 419

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 68  EGLNELRYKLQIYRSGDYWVPTGGLKKEEMDIPPIVTILLVGFSSSGKSSLVNLMYSVLG 127
           E L+E + K+  Y  G +    GG+K  + ++P   T+LLVG   SGKSSLVN +  V  
Sbjct: 93  ESLDEAKSKILSYTPGGWKEKVGGMKLSDYNVPKTTTLLLVGPRGSGKSSLVNRISKVFD 152

Query: 128 RTGLVLFAQTKSGSGKKNYTTMFMEEHNVLRSIKSGFCVYDSRGFNYDKVGEALEELSSW 187
                      S +      T F++E+ ++    + FC+YD+RGF +D   + +E L  W
Sbjct: 153 DDKFAPERAQVSYNPSAGEGTYFLQEY-MIPGCSTSFCLYDTRGF-FDNSYDNIEMLKYW 210

Query: 188 MSDGVHHNQLCLRSGDHNVLLKDIDAEQLSSRNSSKFIQRRVNCAMVVVNVAEVYKALKA 247
           M+ GV H +L +R  D + L   +  +   + + SK   R VN  + VVN   V K++ +
Sbjct: 211 MTRGVCHGELTVRKCDDSSLRTRMKCKVRYNGSQSK-KNRTVNFVIFVVNGLAVLKSMGS 269

Query: 248 GDSKPLEATKELFCSSALRNC------NENPILILTHGDLLTSEERIEGRLKICESLGIS 301
              K  + T  +  +SA  NC      ++ P++++THGDLL+  +R   R+ + E LGI 
Sbjct: 270 EVEKGNQYTDMI--ASAF-NCPYASFKDDKPVVVVTHGDLLSLSDRTRIRVHLGELLGIP 326

Query: 302 ETNGIYDVVCLTEYGFLAEESDPVSAYNVAEAVYRALLISDREHLPKKTLQDWTLFILSW 361
               I+D+          E  DPV+   + + +  +L  +D  +LP+ T+ +    ++  
Sbjct: 327 PAKQIFDI---------PESCDPVTELTIIDMLRYSLEHAD-NNLPQDTVAEKVHRVIGS 376

Query: 362 LMSLMAIFFAFLAQICS 378
           L + + +F      I S
Sbjct: 377 LYACVHLFIMLGIAILS 393