Jatropha Genome Database

JcCB0017431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0017431.10 - phase: 0 
         (540 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m009128 ATP binding protein, putative                           577   e-165
30221.m002215 DNA binding protein, putative                           247   9e-66
30138.m004006 hypothetical protein                                    210   1e-54
29630.m000797 ATP binding protein, putative                           199   3e-51
30174.m008627 DNA binding protein, putative                           128   8e-30
30190.m011245 DNA binding protein, putative                           115   8e-26
30221.m002214 hypothetical protein                                     85   8e-17

>30174.m009128 ATP binding protein, putative
          Length = 527

 Score =  577 bits (1488), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 307/541 (56%), Positives = 360/541 (66%), Gaps = 17/541 (3%)

Query: 1   MGFKRPFDSDEFQELPFKQARQLDFGNNLTQFAHLYKTTSLALDVTDDYDRGFVKSQHHH 60
           MGFKRPFD ++FQELPFKQARQ+D+ N +TQFA LY+TTS   DVTDD +  F KSQ H 
Sbjct: 1   MGFKRPFDCEDFQELPFKQARQVDYSNKMTQFADLYRTTSEETDVTDDQEGSFGKSQEHE 60

Query: 61  TFENNTVFEVPNFSRDIEIXXXXXXXXXXXXDEDVGSRAAAAAYPYSQGHSEFDFPRRFV 120
           +  NN V E     +D  I            D+DVGSR  A +  + +   EFD PRR  
Sbjct: 61  SSGNNCVSEASKLVKDFGIAVPWSLVTSNSVDDDVGSRFTAYSSDFLE--HEFDVPRRLE 118

Query: 121 PFEDAYCSYLDRSPRRQVPLGPNHQASIPIWGGHL-KNPLEREGSFNPNSYSLVSESNND 179
             +DAY SYLD SPR+QVPLGPNHQASIP++G  + KN LE E + +P S SL     + 
Sbjct: 119 ASDDAYFSYLDSSPRKQVPLGPNHQASIPLFGKRVNKNQLEWEDTLDPGSSSLSESDLD- 177

Query: 180 IYNDNEERMMGTCIMPMPDAESSENKNNEAGNGRTDCCCLDEGSVRCVRQHVMEAREKLK 239
           I+ DNEE+ +GTCI+PMPD E+S + ++E G GR DC C+DEGS RCV+QH+MEARE L 
Sbjct: 178 IHTDNEEKFLGTCIIPMPDTETSADNSDEIGGGRKDCSCMDEGSGRCVQQHIMEARESLL 237

Query: 240 NSLGYEKFEHLGFYDMGEEVTRKWSEEDQRAFHAVVYSNPASFGQNFWKQLSQVFATRST 299
             LG+E+  HLGF +MGEEVT KW++E++R FHAVV SNPAS GQNFWK LS VF+TRST
Sbjct: 238 KFLGHEQLVHLGFCEMGEEVTHKWTKEEERVFHAVVNSNPASLGQNFWKHLSHVFSTRST 297

Query: 300 KEIVSYYFNVFMLRRRAAQNRSNLLDIDSDDDELHGINRGSYKXXXXXXXXXXXXXXXXX 359
            EIVSYYFNVFMLRRRA QNRSN LDIDSDDDELHGINRGS+K                 
Sbjct: 298 MEIVSYYFNVFMLRRRAVQNRSNFLDIDSDDDELHGINRGSFKARVLDEDDDSDIESFDQ 357

Query: 360 XXHADHRDNIPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDYVSETPDTKSFDGSR 419
             HAD+ ++  I                               +D VSETP TKSFDGSR
Sbjct: 358 YDHADYGEDTLI----EDGEDDDDDSDGDQGDSSGEATGEDSGVDNVSETPGTKSFDGSR 413

Query: 420 LNAAAVEHVGNNAGIVREDFTVQDDSCMSFEFQADKDDSCDPGDTGAALQVNSATKSDNR 479
            +      V N AG+V EDFTVQD+SCMSFEFQAD  DSCDP DT  A Q  S  +S  +
Sbjct: 414 FD------VVNRAGLVGEDFTVQDNSCMSFEFQADMIDSCDPADTEVAEQ-GSRVRSHEK 466

Query: 480 ACLPGNGDEYSDAVDHDHVYLLDPCDAKAWDARYTVPIKGVELLPTCNMIEEIFGQGTSS 539
            C PGNGD YSD V  D VYLLD CDAKAWD+RYTVPIKGV+ LPTCN+IEEIFG GTS 
Sbjct: 467 ECFPGNGDGYSDGV--DQVYLLDSCDAKAWDSRYTVPIKGVDFLPTCNIIEEIFGHGTSG 524

Query: 540 D 540
           D
Sbjct: 525 D 525


>30221.m002215 DNA binding protein, putative
          Length = 243

 Score =  247 bits (631), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 131/242 (54%), Positives = 164/242 (67%), Gaps = 4/242 (1%)

Query: 46  TDDYDRGFVKSQHHHTFENNTVFEVPNFSRDIEIXXXXXXXXXXXXDEDVGSRAAAAAYP 105
            DD +  F KSQ H +  NN V E     +D  I            D+DVGSR  A +  
Sbjct: 5   ADDQEGSFGKSQEHESSGNNCVSEASKLVKDFRIAVPWSLVTSNSVDDDVGSRFTAYSSD 64

Query: 106 YSQGHSEFDFPRRFVPFEDAYCSYLDRSPRRQVPLGPNHQASIPIWGGHL-KNPLEREGS 164
           + +   EFD PRR    +DAY SYLD SPR+QVPLGPNHQASIP++G  + KN LE E +
Sbjct: 65  FLE--HEFDVPRRLEASDDAYFSYLDSSPRKQVPLGPNHQASIPLFGKRVNKNQLEWEDT 122

Query: 165 FNPNSYSLVSESNNDIYNDNEERMMGTCIMPMPDAESSENKNNEAGNGRTDCCCLDEGSV 224
            +P S S +S+S+ DI+ DNEE+ +GTCI+PMPD E+S + ++E G GR DC C+DEGSV
Sbjct: 123 LDPGSSS-LSKSDLDIHTDNEEKFLGTCIIPMPDTETSADNSDEIGGGRKDCSCMDEGSV 181

Query: 225 RCVRQHVMEAREKLKNSLGYEKFEHLGFYDMGEEVTRKWSEEDQRAFHAVVYSNPASFGQ 284
           RCVRQH+MEARE L   L +E+  HLGFY+MGEEVT KW++E +R FHAVV SNPAS GQ
Sbjct: 182 RCVRQHIMEARESLLKFLRHEQLVHLGFYEMGEEVTHKWTKEKERVFHAVVNSNPASLGQ 241

Query: 285 NF 286
           NF
Sbjct: 242 NF 243


>30138.m004006 hypothetical protein
          Length = 473

 Score =  210 bits (535), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 104/211 (49%), Positives = 140/211 (66%), Gaps = 11/211 (5%)

Query: 126 YCSYLDRSPRRQVPLGPNHQASIPIWGGH-LKNPLEREGSFNPNSYSLVSESNNDIYNDN 184
           Y   L   P+  VP+G N+QA IP W  H  K+ L+  G+       ++ ++N      +
Sbjct: 67  YSLLLHYPPQEAVPIGSNYQAEIPEWSPHDSKSKLKSSGT-----PGVILDANLASGEKD 121

Query: 185 EERMMGTCIMPMPDAESSENKNNEAGNGRTDCCCLDEGSVRCVRQHVMEAREKLKNSLGY 244
           E R+MGTC++PMPD +      +E GN + DC CLDEGS+RCVRQH+++AREK+K  LG 
Sbjct: 122 ENRLMGTCVIPMPDFKCI----DEVGNVKNDCSCLDEGSIRCVRQHILKAREKVKRVLGM 177

Query: 245 EKFEHLGFYDMGEEVTRKWSEEDQRAFHAVVYSNPASFGQNFWKQLSQVFATRSTKEIVS 304
           E+F+ LGF DMGE V+  W+EE+++ FH VV+SNP S G+NFW  LS  F  R+ K+IV 
Sbjct: 178 ERFKDLGFCDMGEAVSENWTEEEEQLFHEVVFSNPVSLGKNFWSHLSAAFPFRTKKDIVC 237

Query: 305 YYFNVFMLRRRAAQNRSNLLDI-DSDDDELH 334
           YYFNVFML+RRA QNR   + I DSD+DE H
Sbjct: 238 YYFNVFMLQRRAEQNRCKSMSIYDSDNDEWH 268



 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 3/75 (4%)

Query: 464 TGAALQVNSATKSDNRACLPGNGDEYSDAVDHDHVYLLDPCDAKAWDARYTV-PIKGVEL 522
           T +     S  K+D+    P + +E S      H    + CD K WDA Y + P   V+L
Sbjct: 379 TSSISSPGSRVKADSDDLWPCSFNEVSCGSGKTH--FSESCDVKIWDAGYMICPKSKVDL 436

Query: 523 LPTCNMIEEIFGQGT 537
           LPTC+MIEE+FG G+
Sbjct: 437 LPTCSMIEEVFGDGS 451


>29630.m000797 ATP binding protein, putative
          Length = 466

 Score =  199 bits (506), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/342 (35%), Positives = 184/342 (53%), Gaps = 12/342 (3%)

Query: 1   MGFKRPFDSDEFQELPFKQARQLDFGNNLTQFAHLYKTTSLALDVTDDYDRGFVKSQHHH 60
           M  KRPF  D+   +  K ++ L+  + LT    L    S  +    D +  F K Q   
Sbjct: 1   MIHKRPFVDDDSYVVARKHSKHLEHIDQLTPILPLDDAYSKPM--IPDGEDSFNKCQDFG 58

Query: 61  TFENNTVFEVPNFSRDIEIXXXXXXXXXXXXDEDVGSRAAAAAYP--YSQGHSEFDFPRR 118
              ++ V  V N   ++E             +  +      + +P  +  GH        
Sbjct: 59  RSGSDPVISVSNEGNNLENGASGSFPHFLWINNGILEADNLSLFPEYFDHGHQ---LRAL 115

Query: 119 FVPFEDAYCSYLDRSPRRQVPLGPNHQASIPIWGGHLKNPLEREGSFNPN-SYSLVSESN 177
           F P E   C  LD   R+ V +GP HQ  +P W G       +    NP  + +  S S+
Sbjct: 116 FQPDEAFSC--LDYPFRKPVSIGPEHQVFVPDWEGVSNTSSNQLDKSNPKVALAQSSSSS 173

Query: 178 NDIYNDNEERMMGTCIMPMPDAESSENKNNEAGNGRTDCCCLDEGSVRCVRQHVMEAREK 237
             + +  EER+MGTCI+P+P+ E   + ++E+    T+C CLD+GS+ CV++H+MEAR K
Sbjct: 174 IIVDDGYEERLMGTCIIPLPEQEVPASHSSEST--ITNCSCLDQGSIDCVKKHIMEARLK 231

Query: 238 LKNSLGYEKFEHLGFYDMGEEVTRKWSEEDQRAFHAVVYSNPASFGQNFWKQLSQVFATR 297
           L+ +LG + FE LGFYDMGE V + W+EE+++ FH +V +NPAS G+NFW  LS    +R
Sbjct: 232 LRENLGKDIFEGLGFYDMGECVAKNWTEEEEQIFHDIVLANPASLGRNFWDHLSVALPSR 291

Query: 298 STKEIVSYYFNVFMLRRRAAQNRSNLLDIDSDDDELHGINRG 339
           + +E+VSYYFNVFMLR+R  QNR + ++IDSD+DE    + G
Sbjct: 292 TKRELVSYYFNVFMLRKRFEQNRFDPVNIDSDNDEWQTSDAG 333


>30174.m008627 DNA binding protein, putative
          Length = 279

 Score =  128 bits (321), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 111/210 (52%), Gaps = 35/210 (16%)

Query: 128 SYLDRSPRRQVPLGPNHQASIPIWGGHLKNPLEREGSFNPNSYSLVSESNNDIYNDNEER 187
           S LD    + +PLGP+ QA IP W G                  +V ES++        +
Sbjct: 67  SLLDLPVEKTIPLGPDFQAEIPEWTG------------------VVCESDS--------K 100

Query: 188 MMGTCIMPMPDAESSENK----NNEAGNGRTDCC-CLDEGSVRCVRQHVMEAREKLKNSL 242
            +G  + P    E  +N+        G GR D C C    SV CVR H  E R K+K  +
Sbjct: 101 WIGARVWP---PEKMDNRFVVEREPIGKGRQDSCGCEVPKSVECVRFHTTERRMKMKREV 157

Query: 243 GYEKFEHLGFYDMGEEVTRKWSEEDQRAFHAVVYSNPASFGQNFWKQLSQVFATRSTKEI 302
           G   F H  F  MGE+V   W++E+++ F A+V SNP S  + FW ++ + F+T+  +++
Sbjct: 158 GV-AFYHWRFDKMGEDVKLSWTKEEEKKFEAIVRSNPPSLDKCFWDEIFKFFSTKRREDL 216

Query: 303 VSYYFNVFMLRRRAAQNRSNLLDIDSDDDE 332
           VSYYFNVF+++RRA QNR    +IDSDDDE
Sbjct: 217 VSYYFNVFLMQRRAHQNRFTPNNIDSDDDE 246


>30190.m011245 DNA binding protein, putative
          Length = 656

 Score =  115 bits (287), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 102/199 (51%), Gaps = 29/199 (14%)

Query: 136 RQVPLGPNHQASIPIWGGHLKNPLEREGSFNPNSYSLVSESNNDIYNDNEERMMGTCIMP 195
           R V +G   QA +P W G                  LVSES        E + +GT   P
Sbjct: 450 RHVSVGRRFQAEVPEWTG------------------LVSES--------ESKWLGTQAWP 483

Query: 196 MPDAE-SSENKNNEAGNGRTDCC-CLDEGSVRCVRQHVMEAREKLKNSLGYEKFEHLGFY 253
           +   E ++  + +  G GR + C C   GSV CVR H+ E R KLK  LG   F H  F 
Sbjct: 484 LEFGEHNAMVQEDTIGKGRPESCGCELPGSVECVRFHIAENRIKLKIELG-SVFYHWKFD 542

Query: 254 DMGEEVTRKWSEEDQRAFHAVVYSNPASFGQNFWKQLSQVFATRSTKEIVSYYFNVFMLR 313
            MGEE+  +W+ E+++ F  VV  N  S  + FW    + F  ++ +E+VSYYFNVF+++
Sbjct: 543 CMGEEIALRWTAEEEKRFKDVVRFNLPSLDKFFWDNSRKYFRRKTKEELVSYYFNVFLVQ 602

Query: 314 RRAAQNRSNLLDIDSDDDE 332
           RR+ QNR     IDSDDDE
Sbjct: 603 RRSYQNRVTPKHIDSDDDE 621


>30221.m002214 hypothetical protein
          Length = 135

 Score = 85.1 bits (209), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 39/42 (92%), Positives = 40/42 (95%)

Query: 301 EIVSYYFNVFMLRRRAAQNRSNLLDIDSDDDELHGINRGSYK 342
           EIVSYYFNVFMLRRRA QNRSN LDIDSDDDELHGINRGS+K
Sbjct: 2   EIVSYYFNVFMLRRRAVQNRSNFLDIDSDDDELHGINRGSFK 43