Jatropha Genome Database

JcCB0014511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0014511.10 - phase: 1 /pseudo/partial
         (305 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29851.m002424 lipoxygenase, putative                                  134   4e-32
29851.m002422 lipoxygenase, putative                                  131   5e-31
29468.m000030 lipoxygenase, putative                                  126   1e-29
29929.m004699 lipoxygenase, putative                                  117   8e-27
29808.m000898 lipoxygenase, putative                                  110   1e-24
30152.m002449 lipoxygenase, putative                                  100   1e-21
30169.m006387 lipoxygenase, putative                                   96   3e-20
30169.m006389 lipoxygenase, putative                                   93   1e-19
29726.m003891 lipoxygenase, putative                                   90   2e-18
30128.m008781 lipoxygenase, putative                                   88   6e-18
30178.m000859 lipoxygenase, putative                                   86   3e-17
29680.m001710 lipoxygenase, putative                                   84   1e-16

>29851.m002424 lipoxygenase, putative
          Length = 786

 Score =  134 bits (338), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/176 (46%), Positives = 99/176 (56%), Gaps = 36/176 (20%)

Query: 4   PSVNRNHPSKQLLTP-VNATTNWL--LAKAHVCSSDAGLHQLVHH--------------- 45
           PS + N P +Q+LTP V+A+T WL  LAKAHVCS+DAG HQL+HH               
Sbjct: 401 PSKDSNSPIRQVLTPPVDASTYWLWQLAKAHVCSNDAGAHQLIHHWLRAHACMEPFIIAA 460

Query: 46  -----------------IGMRLEINAQARGFPINAG*IIEFSFAPAK*IMHISASVYRDG 88
                            +   L INAQAR    NA  I+E  FAP K  M I++S Y+D 
Sbjct: 461 NRQLSAMHPIYKLLKPHMRYTLAINAQAREVLTNANGIVESCFAPEKYCMEITSSAYKDW 520

Query: 89  -RFDMDALPADLNRRDYVKPDPTGTKGIRLTIEDYPCASDGLLIWSTIEILSRIIL 143
            RFDM+ LPADL RR    PDP    G+RL IEDYP A+DGLLIWS I+ L +  +
Sbjct: 521 WRFDMEGLPADLIRRGLAIPDPKQPHGLRLLIEDYPFANDGLLIWSAIQDLVKTFV 576


>29851.m002422 lipoxygenase, putative
          Length = 837

 Score =  131 bits (329), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/173 (46%), Positives = 97/173 (56%), Gaps = 36/173 (20%)

Query: 4   PSVNRNHPSKQLLT-PVNATTNWL--LAKAHVCSSDAGLHQLVHH--------------- 45
           PS + + P KQ+LT PV+ATT WL  LAKAHVCS+D+G HQL+HH               
Sbjct: 452 PSTDSSFPVKQVLTSPVDATTYWLWQLAKAHVCSNDSGAHQLIHHWLRVHACTEPLIIAA 511

Query: 46  -----------------IGMRLEINAQARGFPINAG*IIEFSFAPAK*IMHISASVYRDG 88
                            +   L INAQAR    NA  I+E  FAP K  M I++S Y+D 
Sbjct: 512 NRQLSVMHPIYKLLKPHMRYTLAINAQAREVLTNANGIVESYFAPEKYCMEITSSAYKDW 571

Query: 89  -RFDMDALPADLNRRDYVKPDPTGTKGIRLTIEDYPCASDGLLIWSTIEILSR 140
            RFDM+ LPADL RR    PD     G+RL IEDYP A+DGLLIWS I+ L +
Sbjct: 572 WRFDMEGLPADLIRRGLAIPDAKQPHGLRLLIEDYPFANDGLLIWSAIQDLVK 624


>29468.m000030 lipoxygenase, putative
          Length = 445

 Score =  126 bits (317), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 91/168 (54%), Gaps = 34/168 (20%)

Query: 3   PPSVNRNHPSKQLLTPVNATTNWL--LAKAHVCSSDAGLHQLVHH--------------- 45
           PP+       + +  PV+ATT W+  LAKAHVCS+DAG+HQLV+H               
Sbjct: 61  PPTAPSARSKRAVTPPVDATTTWIWQLAKAHVCSNDAGVHQLVNHWLRTHACLEPFILAA 120

Query: 46  -----------------IGMRLEINAQARGFPINAG*IIEFSFAPAK*IMHISASVYRDG 88
                            +   LEINA AR   I+A  +IE  F P +  M ISA+ Y+D 
Sbjct: 121 HRQLSSMHPIFKLLDPHMRYTLEINALARQSLISADGVIENCFTPGRYCMEISAAAYKDW 180

Query: 89  RFDMDALPADLNRRDYVKPDPTGTKGIRLTIEDYPCASDGLLIWSTIE 136
           RFDM+ LP+DL RR    PDPT   G++L +EDYP A DGLLIW  IE
Sbjct: 181 RFDMEGLPSDLIRRGMAVPDPTQPHGLKLLLEDYPYAQDGLLIWFAIE 228


>29929.m004699 lipoxygenase, putative
          Length = 912

 Score =  117 bits (292), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/152 (46%), Positives = 86/152 (56%), Gaps = 35/152 (23%)

Query: 20  NATTNWL--LAKAHVCSSDAGLHQLVHH-------------------------------- 45
           +AT +W+  LAKAHVCS+DAG+HQLV+H                                
Sbjct: 543 DATIHWIWKLAKAHVCSNDAGVHQLVNHWLRTHAAMEPFIIATHRQLSAMHPIYKLLHPH 602

Query: 46  IGMRLEINAQARGFPINAG*IIEFSFAPAK*IMHISASVYRD-GRFDMDALPADLNRRDY 104
           +   LEINA AR   IN G IIE  F+P K  M IS++ Y+   RFDM+ALPADL RR  
Sbjct: 603 MRYTLEINALARQSLINGGGIIEACFSPGKYAMEISSAAYKSMWRFDMEALPADLIRRGM 662

Query: 105 VKPDPTGTKGIRLTIEDYPCASDGLLIWSTIE 136
            + DP    G+RL IEDYP ASDGLLIWS I+
Sbjct: 663 AEEDPLMPCGVRLVIEDYPYASDGLLIWSAIK 694


>29808.m000898 lipoxygenase, putative
          Length = 831

 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 91/172 (52%), Gaps = 37/172 (21%)

Query: 1   TRPPSVNRNHPSKQLLTP-VNATTNWL--LAKAHVCSSDAGLHQLV-------------- 43
           TRPP +      + + TP  +AT+ WL  +AKAHVC+ D+G HQL+              
Sbjct: 442 TRPP-IGDKPVWRHVFTPSFDATSCWLWRMAKAHVCAHDSGYHQLIVHWLRTHCVTEPYI 500

Query: 44  ------------------HHIGMRLEINAQARGFPINAG*IIEFSFAPAK*IMHISASVY 85
                              H    LEINA AR   INAG IIE SF+P K  M  S+ VY
Sbjct: 501 IAANRQLSAMHPIYRLLLPHFRYTLEINALARDSLINAGGIIESSFSPGKYSMEFSSVVY 560

Query: 86  -RDGRFDMDALPADLNRRDYVKPDPTGTKGIRLTIEDYPCASDGLLIWSTIE 136
            +  RFDM+ LPADL RR     DPT T G++L IEDYP A+D L++W +I+
Sbjct: 561 DKLWRFDMEGLPADLIRRGMAVEDPTATHGLKLAIEDYPFANDALIMWDSIK 612


>30152.m002449 lipoxygenase, putative
          Length = 902

 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 85/169 (50%), Gaps = 36/169 (21%)

Query: 4   PSVNRNHPSKQLLTP-VNATTNWL--LAKAHVCSSDAGLHQLVHH--------------- 45
           P +      KQ+ TP  +AT+ WL  LAKAH  + D+G+HQLV H               
Sbjct: 516 PKIGDKPQWKQVFTPSFDATSCWLWRLAKAHALAHDSGIHQLVSHWLRTHACVEPYIIAA 575

Query: 46  -----------------IGMRLEINAQARGFPINAG*IIEFSFAPAK*IMHISASVY-RD 87
                                +EINA ARG  IN G IIE +F P K  + +S+  Y + 
Sbjct: 576 NRQLSEMHPIYRLLHPHFRYTMEINALARGKLINGGGIIESTFNPGKYSLELSSVAYDKL 635

Query: 88  GRFDMDALPADLNRRDYVKPDPTGTKGIRLTIEDYPCASDGLLIWSTIE 136
            RFD +ALP DL +R     DPT   G++LTIEDYP A+DGL +W  I+
Sbjct: 636 WRFDTEALPGDLIKRGMAVEDPTAKHGLKLTIEDYPFANDGLELWDAIK 684


>30169.m006387 lipoxygenase, putative
          Length = 789

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 84/172 (48%), Gaps = 37/172 (21%)

Query: 1   TRPPSVNRNHPSKQLLTPVNATTN---WLLAKAHVCSSDAGLHQLVHH------------ 45
           TRPP   +    KQ+ T    +T    W LAKAHV + D+G HQLV H            
Sbjct: 401 TRPPMDGKPQ-WKQVFTHTWDSTGCWLWRLAKAHVLAHDSGYHQLVSHWLRTHCVTEPFI 459

Query: 46  --------------------IGMRLEINAQARGFPINAG*IIEFSFAPAK*IMHISASVY 85
                                   +EINA AR   INA  IIE SF+P K  M +S+ VY
Sbjct: 460 IATNRQLSVMHPIYRLLHPHFRYTMEINALARESLINAEGIIESSFSPGKYAMELSSFVY 519

Query: 86  -RDGRFDMDALPADLNRRDYVKPDPTGTKGIRLTIEDYPCASDGLLIWSTIE 136
            +  RFD  +LP DL  R     DPT   G++LTIEDYP A+DGL++W  I+
Sbjct: 520 DKFWRFDHQSLPKDLISRGIAVEDPTSPHGLKLTIEDYPFANDGLILWDIIK 571


>30169.m006389 lipoxygenase, putative
          Length = 900

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 83/171 (48%), Gaps = 35/171 (20%)

Query: 1   TRPPSVNRNHPSKQLLTPVNATTNWL--LAKAHVCSSDAGLHQLVHH------------- 45
           TRPP   +       +   ++T  WL  LAKAHV + ++G HQL+ H             
Sbjct: 512 TRPPMDGKPQWKDAYVPTWHSTGVWLWRLAKAHVLAHESGYHQLISHWLKTHACTEPYII 571

Query: 46  -------------------IGMRLEINAQARGFPINAG*IIEFSFAPAK*IMHISASVY- 85
                                  +EINA AR   INAG IIE SF+P K  + +S+ +Y 
Sbjct: 572 AANRQLSVMHPIYRLLHPHFRYTMEINALARQALINAGGIIESSFSPGKYCLEMSSVIYD 631

Query: 86  RDGRFDMDALPADLNRRDYVKPDPTGTKGIRLTIEDYPCASDGLLIWSTIE 136
           +  RFD  A+P +L  R     DP+   G++L IEDYP ASDGLL+W  I+
Sbjct: 632 KLWRFDQQAMPQELISRGMAVQDPSAPHGVKLRIEDYPFASDGLLLWDAIK 682


>29726.m003891 lipoxygenase, putative
          Length = 868

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 76/168 (45%), Gaps = 35/168 (20%)

Query: 4   PSVNRNHPSKQLLTPVNATTN---WLLAKAHVCSSDAGLHQLVHH--------------- 45
           P   R+    ++ TP         W LAKA+   +D+G HQL+ H               
Sbjct: 480 PQGERHGAVSKVFTPAEDGVEGSVWQLAKAYAAVNDSGYHQLISHWLNTHAAIEPFIIAT 539

Query: 46  -----------------IGMRLEINAQARGFPINAG*IIEFSFAPAK*IMHISASVYRDG 88
                                + INA AR   INAG I+E +  PAK  M +S+ VY+  
Sbjct: 540 NRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGILEITVFPAKYAMELSSVVYKSW 599

Query: 89  RFDMDALPADLNRRDYVKPDPTGTKGIRLTIEDYPCASDGLLIWSTIE 136
            F   ALPADL +R    PD +   G+RL IEDYP A DGL +WS IE
Sbjct: 600 VFTEHALPADLLKRGVAVPDSSQRHGLRLLIEDYPYAVDGLEVWSAIE 647


>30128.m008781 lipoxygenase, putative
          Length = 871

 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 69/143 (48%), Gaps = 32/143 (22%)

Query: 25  WLLAKAHVCSSDAGLHQLVHH-----IGMR---------------------------LEI 52
           W LAKA+V   D+G+HQL+ H       M                            + I
Sbjct: 512 WQLAKAYVAVIDSGVHQLISHWLHTHAAMEPFIIATNRHLSVLHPIHKLLHPHFRDTMNI 571

Query: 53  NAQARGFPINAG*IIEFSFAPAK*IMHISASVYRDGRFDMDALPADLNRRDYVKPDPTGT 112
           NA AR   INAG ++EF+  PAK  M +++  Y++  F   ALP DL +R     DP   
Sbjct: 572 NAVARQILINAGGLLEFTVFPAKYAMEMTSKAYKNWNFTEQALPEDLKKRGMAVEDPNCP 631

Query: 113 KGIRLTIEDYPCASDGLLIWSTI 135
            G+RL I+DYP A DGL IWS I
Sbjct: 632 HGVRLLIKDYPFAVDGLEIWSAI 654


>30178.m000859 lipoxygenase, putative
          Length = 852

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 70/144 (48%), Gaps = 32/144 (22%)

Query: 25  WLLAKAHVCSSDAGLHQLVHH------------IGMR--------------------LEI 52
           W LAKAHV ++D+  HQL+ H            I  R                    + +
Sbjct: 489 WQLAKAHVAANDSAYHQLISHWLHTHAVVEPFIIATRRQLSVMHPIHRLLDPHFKDTMHV 548

Query: 53  NAQARGFPINAG*IIEFSFAPAK*IMHISASVYRDGRFDMDALPADLNRRDYVKPDPTGT 112
           NA AR   IN+G I+E +    +  M +SA +Y++ RFD  ALPADL +R     DP   
Sbjct: 549 NALARKILINSGGILEKTLFTGEISMELSAELYKEWRFDEQALPADLLKRRLALEDPDSP 608

Query: 113 KGIRLTIEDYPCASDGLLIWSTIE 136
            G++L  EDYP  +DGL IW  I+
Sbjct: 609 TGVQLLFEDYPYGADGLDIWHAIK 632


>29680.m001710 lipoxygenase, putative
          Length = 865

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 68/144 (47%), Gaps = 32/144 (22%)

Query: 25  WLLAKAHVCSSDAGLHQLVHH--------------------------------IGMRLEI 52
           W LAKA+V  +D+G HQL+ H                                    + I
Sbjct: 505 WKLAKAYVAVNDSGYHQLISHWLNTHAVIEPFVIATNRHLSVLHPIYKLLHPHFKDTMYI 564

Query: 53  NAQARGFPINAG*IIEFSFAPAK*IMHISASVYRDGRFDMDALPADLNRRDYVKPDPTGT 112
           NA AR   INAG ++E +  P K  + +S+ VY+D  F   ALP DL +R     D +  
Sbjct: 565 NALARQILINAGGVLESTVFPGKYALELSSVVYKDWVFTDQALPEDLKKRGMAVEDESLP 624

Query: 113 KGIRLTIEDYPCASDGLLIWSTIE 136
            G+RL IEDYP A DGL IWS I+
Sbjct: 625 HGLRLLIEDYPFAVDGLEIWSAIK 648