Jatropha Genome Database

JcCB0012961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0012961.10 - phase: 2 /pseudo/partial
         (359 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29910.m000926 aspartyl-tRNA synthetase, putative                      204   7e-53

>29910.m000926 aspartyl-tRNA synthetase, putative
          Length = 540

 Score =  204 bits (518), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 93/114 (81%), Positives = 104/114 (91%)

Query: 197 ASEGGASAFKLDYKGQPACLAQSHQLHKQMAICGDKERVFEVGSVFKAEESYTPRHLCEF 256
           +SEGG++ FKLDYKGQPACLAQS QLHKQMAICGDKERVFEVG VF+AE+SYT RHLCEF
Sbjct: 266 SSEGGSAVFKLDYKGQPACLAQSPQLHKQMAICGDKERVFEVGPVFRAEDSYTHRHLCEF 325

Query: 257 VGHDVEMEIKKHYSEVMDVVDRLFITIFDYLNEHCKNELEAVQRQHPFEPLKVI 310
           VG DVEMEIKKHYSEVMD+VDRLF+ +FDYLNE CK EL+AV RQ+PFEPLK +
Sbjct: 326 VGLDVEMEIKKHYSEVMDIVDRLFVKMFDYLNEKCKKELDAVCRQYPFEPLKYL 379