Jatropha Genome Database

JcCB0012281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0012281.10 - phase: 0 
         (533 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011062 f11m21.29 protein, putative                             690   0.0  
30147.m014166 conserved hypothetical protein                          206   2e-53
29983.m003156 f11m21.29 protein, putative                             127   9e-30

>30190.m011062 f11m21.29 protein, putative
          Length = 504

 Score =  690 bits (1780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/504 (69%), Positives = 395/504 (78%), Gaps = 23/504 (4%)

Query: 15  FVFEAREIDIDYEFDAAMFFDFTREESAADARQAERWFETAQSYPPSPFVAKFVLREDSL 74
            VFEARE+D+DYEFDAAMFFDFTR+ES A+A +AERWF+TAQSYPPSPFVAK  LRE   
Sbjct: 14  LVFEAREVDLDYEFDAAMFFDFTRQESLAEAHEAERWFDTAQSYPPSPFVAKLALRE--- 70

Query: 75  LEDIRTSPKSNDAENTATLISDDCSDDLV-ADLPAMEA-NKESKGTYRGIFTNLQSSNLQ 132
                        ENT TLI+++C   L+  + P +E  N+E + TYRGIFTNLQS +LQ
Sbjct: 71  -------------ENTETLITEECRGGLLDTEAPEIEVENQECERTYRGIFTNLQSGHLQ 117

Query: 133 KFSNEPLELKTGLTYYNHSSTDKARAKVKSTVKPNLPRCSTLMKPTASMLAKQNRLLHVN 192
           +  N+PLEL T LT YNH+ T  +R  VKSTVKPNLPR STLMKPTAS+LAKQN+    +
Sbjct: 118 EVQNKPLELPTELTNYNHTYTGMSR--VKSTVKPNLPRRSTLMKPTASVLAKQNQRPQGD 175

Query: 193 GSRLQMLLVQKEKSLCNS-MVESQAAKRQKLEGGHSCRVGDAKQQADFIHKAPKKDGAVD 251
           GSR Q+L  QKEKS+C+S  VESQAAKRQKLEGGHS + GDAKQQ DF+HKAP+K+G +D
Sbjct: 176 GSRFQLLFDQKEKSICSSSAVESQAAKRQKLEGGHSRKFGDAKQQIDFVHKAPRKEGTID 235

Query: 252 KSCAHSKLRLTIPREPDLETAHRAQRIRQKNTTRFECVTVAVQRFKARPLNRKILEAXXX 311
           K  A S+LRLTIPREPDLETAHRA R+R KN T  E VTVA QRFKARPLNRKILEA   
Sbjct: 236 KCSAQSRLRLTIPREPDLETAHRAHRMRPKNNTEVEHVTVAAQRFKARPLNRKILEAPSL 295

Query: 312 XXXXXXXXXXXEFQEFHLKTSERAMQHASAVSSTSFQCNDSEQGLDKPTTISVAEMGNRE 371
                      EFQEFHLKT ERAMQHA  VSS+S Q NDSEQGLDK TT+SVAE+G RE
Sbjct: 296 PLPKKSTPKLPEFQEFHLKTLERAMQHAFVVSSSSLQHNDSEQGLDKSTTVSVAEIGKRE 355

Query: 372 SRRPSTMDAQKQDGCSTTHIFKARPLNKKIFTSKGDIGIFRNSKRETTVPLEFNFRTEKR 431
           SRRPST+D +KQDGCS  H+FKARPLNKKIFTSKGDIG+FRNSKRETTVP EFNF TEKR
Sbjct: 356 SRRPSTVDTKKQDGCSAPHVFKARPLNKKIFTSKGDIGVFRNSKRETTVPTEFNFHTEKR 415

Query: 432 IQHDPPTELFSKLSLKAELQTNNGSRLQLPRPSFLSINGSKENRLNHLQTEHK--TTHLM 489
           I H+PP +LFSKLSL +ELQ NNG RLQLPRPS +SI GSKENRLNHLQTEHK   TH  
Sbjct: 416 IHHNPPIDLFSKLSLASELQPNNGFRLQLPRPSLMSIKGSKENRLNHLQTEHKITVTHSA 475

Query: 490 KEKPSIFGGKQTQCSEVANQLSMR 513
           KEKP IFGGKQTQ SEV NQLSMR
Sbjct: 476 KEKPLIFGGKQTQSSEVGNQLSMR 499


>30147.m014166 conserved hypothetical protein
          Length = 412

 Score =  206 bits (525), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 166/489 (33%), Positives = 229/489 (46%), Gaps = 121/489 (24%)

Query: 15  FVFEAREIDIDYEFDAAMFFDFTREESAADARQAERWFETAQSYPPSPFVAK-------- 66
           + F   EID DYE+DAAM++DFTR ES  ++ +AERWF++A  YPPSP + K        
Sbjct: 6   YEFWNEEIDFDYEYDAAMYYDFTRPESDFESLEAERWFDSAAYYPPSPLIIKLNWEPSVP 65

Query: 67  -------FVLREDSLLEDIRTSPKSNDAENTATLISDDCSDDLVADLPAMEANKESKGTY 119
                  F+ R    +E+I  +  S D+E T+   S+                       
Sbjct: 66  VKSGHSSFICR---AVENINRTSSSMDSEVTSAAGSE----------------------- 99

Query: 120 RGIFTNLQSSNLQKFSNEPLELKTGLTYYNHSSTDKARAKVKSTVKPNLPRCSTLMKPTA 179
             I++  +S           + K+ L+ Y+H                        M PTA
Sbjct: 100 --IYSEARS-----------QTKSPLSKYSH-----------------------FMNPTA 123

Query: 180 SMLAKQNRLLHVNGSRL----QMLLVQKEKSLCNSMVE-SQAAKRQKLEGGHSCRVGDAK 234
           S LAKQNR   ++  RL    Q  +  ++KS  +S    +QA KRQKLE G+ C+V   K
Sbjct: 124 SQLAKQNRPPQIHCDRLLRRSQKFVKNEDKSSRSSCTNGTQATKRQKLEAGYLCKVARLK 183

Query: 235 QQADFIHKAPKKDGAVDKSCAHSKLRLTIPREPDLETAHRAQRIRQK-NTTRFECVTVAV 293
            Q+ F+HK PKK G  +     +K ++TIPREP+LETA RA+R R K N    E      
Sbjct: 184 HQSHFLHKEPKKVGLTEIHTKLAKPKVTIPREPNLETAFRAERHRSKINLDLVETENSKP 243

Query: 294 QRFKARPLNRKILEAXXXXXXXXXXXXXXEFQEFHLKTSERAMQHASAVSSTSFQCNDSE 353
             F+ARPLNRKILEA              EFQ FHL+TS RAMQH     + S  C+ S 
Sbjct: 244 CTFRARPLNRKILEAPSLPLSKKSTPQLPEFQVFHLRTSARAMQHQFINEANSPNCSPSR 303

Query: 354 QGLDKPTTISVAEMGNRESRRPSTMDAQKQDGCSTTHIFKARPLNKKIFTSKGDIGIFRN 413
           Q     +   +   G +E      ++AQ +        FKAR LNKK             
Sbjct: 304 QNETIRSIRVIPVAGLKEK-----LEAQDK--------FKARCLNKK------------- 337

Query: 414 SKRETTVPLEFNFRTEKRIQHDPPTELFSKLSLKAELQTNNGSRLQLPRPSFLSINGSKE 473
                    E NF T+KR  ++PP +LFSKLSL +E+ +N   R ++ R S +  + +K 
Sbjct: 338 ---------ERNFPTDKRFPNEPPIDLFSKLSLTSEVNSNTKCRSKMTRHSKMK-SFAKS 387

Query: 474 NRL--NHLQ 480
            RL  NH Q
Sbjct: 388 PRLGGNHFQ 396


>29983.m003156 f11m21.29 protein, putative
          Length = 702

 Score =  127 bits (320), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 215/498 (43%), Gaps = 107/498 (21%)

Query: 22  IDIDYEFDAAMFFDFTREESAADARQAERWFETAQSYPPSPFVAKF----VLREDSLLED 77
           ID  YEF A  F+DFT+ ES  +  +AE WF+ A SY PSPF+ +       + +SL + 
Sbjct: 15  IDEIYEFSAPRFYDFTKGESDEETLKAELWFDQALSYAPSPFMPRIKTGRSFKVESLCDF 74

Query: 78  IRTSPKSNDAENTATLISDDCSDDLVADLPAM-------------EANKESKGTYRGIFT 124
                K    E+++   S   S ++   +  M             EANKE+      +  
Sbjct: 75  SEAEQKQEVTESSSDSPSPSSSSEIKPQVEIMNSTETKEKETTLQEANKENNANLVNV-- 132

Query: 125 NLQSSNLQKFSNEPLELKTGLTYYNHSSTDKARAKVKSTVKPNLP--RCSTLMK-PTASM 181
           + Q   ++    E  E KT             +  + +  K +      +TL++ P+A  
Sbjct: 133 SCQEDKMETIRAEETESKTETCCTPEPPVASQKEGLLTNSKKHQSGRHIATLVRNPSALK 192

Query: 182 LAKQNRLLHVNGSRLQMLLVQKEKSLCNS------MVESQAAKRQKLEGGHSCRVGDAKQ 235
              Q++   V G + +   V++E  + N+        E+QA KRQKLEGG S  + + K 
Sbjct: 193 PKNQSQSSQVKGFKPES--VKRETKIKNTPGASILAQENQAIKRQKLEGGRSREILNVKP 250

Query: 236 QADFIHKAPKKDGAVDKSCAHS-------------------------------------- 257
                HK+  K G V  S   S                                      
Sbjct: 251 PQPLHHKS--KLGLVSGSSNSSVANKMKKEERKVYVREQPAPFVSMAEMMKKFQSSTRDL 308

Query: 258 --KLRLTIPREPDLETAHRAQRIRQKNTTRFECVTVA-VQRFKARPLNRKILEAXXXXXX 314
             +L LT P+EP+ ETA R + +R K++   E   +A + +FKARPLN+K          
Sbjct: 309 KTQLTLTTPKEPEFETAQRVRSVRIKSSAELEEEMMAKIPKFKARPLNKK---------- 358

Query: 315 XXXXXXXXEFQEFHLKTSERAMQHASAVSSTSFQCNDSEQGLDKPTTISVAEMG----NR 370
                      EFHL+T+ RA Q+A + S  S + +   Q   KP  ++  +        
Sbjct: 359 -----------EFHLETAARATQNADSASVASTEVSHKSQW--KPNCLTEPKAPVLHTTL 405

Query: 371 ESRRPSTMDAQKQDGCSTTHI--FKARPLNKKIFTSKGDIGIFRNSKRETTVPLEFNFRT 428
            +R P    + + +     +I  FKARPLNKKIF SKG++G+F N K+  T+P EF+F T
Sbjct: 406 RARPPKVKSSSELEKEELENIPKFKARPLNKKIFESKGELGLFCNVKKHVTIPQEFHFAT 465

Query: 429 EKRIQHDPP---TELFSK 443
            +RI   PP    +LF K
Sbjct: 466 NERI--PPPAAVADLFDK 481