Jatropha Genome Database

JcCB0011561.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0011561.20 + phase: 0 
         (188 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007171 electron transporter, putative                          252   6e-68
29648.m001915 thioredoxin m(mitochondrial)-type, putative              65   2e-11
30004.m000426 thioredoxin m(mitochondrial)-type, putative              64   5e-11
29863.m001051 thioredoxin m(mitochondrial)-type, putative              57   5e-09
29118.m000100 Thioredoxin H-type                                       52   1e-07
35973.m000023 thioredoxin m(mitochondrial)-type, putative              52   2e-07
29983.m003200 thioredoxin m(mitochondrial)-type, putative              51   3e-07
29822.m003461 Thioredoxin H-type, putative                             50   4e-07
30170.m014109 Thioredoxin H-type, putative                             50   6e-07
29908.m006121 protein disulfide isomerase, putative                    50   7e-07
30128.m008894 protein disulfide isomerase, putative                    50   9e-07
28166.m001053 Thioredoxin H-type, putative                             49   1e-06
29801.m003173 thioredoxin m(mitochondrial)-type, putative              49   1e-06
28076.m000415 protein disulfide isomerase, putative                    48   3e-06
29915.m000489 Thioredoxin H-type, putative                             48   3e-06
29653.m000292 Hsc70-interacting protein, putative                      48   3e-06

>30131.m007171 electron transporter, putative
          Length = 268

 Score =  252 bits (644), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 121/143 (84%), Positives = 131/143 (91%), Gaps = 1/143 (0%)

Query: 38  KTQKENSLFSTTNTTRKRPFSLST-QPRRLLCRPPLGKYVREDYLVKKKSAQEIQELVRG 96
           KT +E SLFS TNTT+  PFS ST  PRRLLCRPP GKYVREDYLVKKKSAQEIQELVRG
Sbjct: 38  KTHQEISLFSRTNTTKSTPFSPSTTHPRRLLCRPPNGKYVREDYLVKKKSAQEIQELVRG 97

Query: 97  ERNVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPT 156
           ERNVP+IIDFYATWCGPCILMAQELEMLAVEYESNA+IVKVDTD+EYEFA DMQVRGLPT
Sbjct: 98  ERNVPLIIDFYATWCGPCILMAQELEMLAVEYESNAMIVKVDTDDEYEFARDMQVRGLPT 157

Query: 157 LFFISPDPKKDAIRTEGLIPIQM 179
           +FFISPDP KDAIRTEG++ ++M
Sbjct: 158 VFFISPDPNKDAIRTEGILLMEM 180


>29648.m001915 thioredoxin m(mitochondrial)-type, putative
          Length = 183

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 3/96 (3%)

Query: 91  QELVRGERNVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQ 150
           + LV    N P++++F+A WCGPC ++A  +  LA EY       KV+TDE    A+   
Sbjct: 87  ESLVIASEN-PVLVEFWAPWCGPCRMIAPVINELAKEYAGKIACFKVNTDECPNIANKYG 145

Query: 151 VRGLPTLFFISPDPKKDAIRTEGLIPIQMMRDIIDK 186
           +R +PT+ F +   KK+++   G +P   +   I+K
Sbjct: 146 IRSIPTVLFFNKGEKKESVI--GAVPKTTLSSTIEK 179


>30004.m000426 thioredoxin m(mitochondrial)-type, putative
          Length = 181

 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 12/151 (7%)

Query: 38  KTQKENSLFSTTNTTRKRPFSLSTQPRRLLCRPPLGKYVREDYLVKKKSA--QEIQELVR 95
           K  K +S+ +  +  R  P S   +P R++C         +D  V+  +   Q  + LV 
Sbjct: 39  KGLKVSSVTTARSLARSPPRSQLARPGRIVCE-------AQDTAVEVLAVTDQTWKSLVL 91

Query: 96  GERNVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLP 155
            E   P++++F+A WCGPC ++   ++ LA EY       K++TDE    A    +R +P
Sbjct: 92  -ESEFPVLVEFWAPWCGPCRMIHPVIDALAGEYVGKLKCYKLNTDESPSVATQYGIRSIP 150

Query: 156 TLFFISPDPKKDAIRTEGLIPIQMMRDIIDK 186
           T+       KKDAI   G +P   +   I+K
Sbjct: 151 TVMIFKDGEKKDAII--GAVPKTTLTASIEK 179


>29863.m001051 thioredoxin m(mitochondrial)-type, putative
          Length = 170

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 2/84 (2%)

Query: 82  VKKKSAQEIQELVRGERNVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDE 141
            KK++   + EL+    + P+++DFYATWCGPC LM   L  ++   +    +VK+DT++
Sbjct: 63  AKKQTFANLDELLENA-DKPVLVDFYATWCGPCQLMTPILNEVSTILKDTIQVVKIDTEK 121

Query: 142 EYEFAHDMQVRGLPTLFFISPDPK 165
               A   ++  LPT F I  D K
Sbjct: 122 YPSIADKYRIEALPT-FIIFKDGK 144


>29118.m000100 Thioredoxin H-type
          Length = 118

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)

Query: 102 IIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTLFFI 160
           I++DF A+WCGPC  +A  L  LA +   N   +KVD DE    AH+  V  +PT  F+
Sbjct: 31  IVVDFTASWCGPCRFIAPFLAELAKKL-PNVTFLKVDVDELKTVAHEWAVESMPTFMFL 88


>35973.m000023 thioredoxin m(mitochondrial)-type, putative
          Length = 108

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 102 IIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTLFFIS 161
           +++DF+A WCGPC  ++  L  LA EY     +VK++ DE  +      VRGLPTL   +
Sbjct: 23  VLVDFWADWCGPCKALSPILADLAGEY-PEVRVVKINADENRQAMERHAVRGLPTLILFA 81


>29983.m003200 thioredoxin m(mitochondrial)-type, putative
          Length = 180

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 6/89 (6%)

Query: 101 PIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTL--- 157
           P++++F+A WCGPC ++   +  L+ +Y       K+ TDE    A    +R +PT+   
Sbjct: 93  PVLVEFWAPWCGPCRIIHPVVAELSEQYAGKLNFYKLSTDESPSTATKYGIRSVPTVMXX 152

Query: 158 FFISPDPKKDAIRTEGLIPIQMMRDIIDK 186
            F++ + KKDA+   G +P   +   I+K
Sbjct: 153 IFVNGE-KKDAVL--GAVPKTTLTAAIEK 178


>29822.m003461 Thioredoxin H-type, putative
          Length = 133

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 102 IIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTLFFIS 161
           +++DF A+WCGPC  M  E++ +A +Y S+    K+D DE    A +  V+ +PT   + 
Sbjct: 49  MVVDFAASWCGPCKFMEPEIKSMATKY-SDVQFSKIDVDELPGVAQEFGVQAMPTFVLVK 107

Query: 162 PDPKKDAI 169
              + D +
Sbjct: 108 KGKEVDRV 115


>30170.m014109 Thioredoxin H-type, putative
          Length = 118

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 102 IIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTLFFI 160
           I++DF A+WCGPC  +A  L  +A +   N   +KVD DE    A D  V  +PT  F+
Sbjct: 30  IVVDFTASWCGPCRFIAPILAEMAKKM-PNVTFLKVDVDELKSVAEDWAVEAMPTFMFL 87


>29908.m006121 protein disulfide isomerase, putative
          Length = 498

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 5/87 (5%)

Query: 82  VKKKSAQEIQELV-RGERNVPIIIDFYATWCGPCILMAQELEMLAVEYESNA--IIVKVD 138
           VK   A  +Q++V    +NV  +++FYA WCG C  +A  L+ +AV Y+S+A  +I K+D
Sbjct: 378 VKVVVADTLQDIVFNSGKNV--LLEFYAPWCGHCKQLAPILDEVAVSYKSDADIVIAKLD 435

Query: 139 TDEEYEFAHDMQVRGLPTLFFISPDPK 165
                  +    VRG PT++F S   K
Sbjct: 436 ATANDIPSDTFDVRGYPTVYFRSASGK 462


>30128.m008894 protein disulfide isomerase, putative
          Length = 362

 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 102 IIIDFYATWCGPCILMAQELEMLAVEY--ESNAIIVKVDTDEEYEFAHDMQVRGLPTLFF 159
           ++++FYA WCG C  +A   E +A  +  E + +I  VD D+  E A    V G PTL F
Sbjct: 166 VLVEFYAPWCGHCKQLAPTYEKVAAAFKLEEDVVIANVDADKYRELAEKYGVSGYPTLKF 225

Query: 160 I 160
            
Sbjct: 226 F 226


>28166.m001053 Thioredoxin H-type, putative
          Length = 124

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)

Query: 98  RNVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTL 157
           +  PI++ F A+WC P + M    E LA+ Y+ + + + VD DE    A  M+V+ +PT 
Sbjct: 30  QGCPIVVHFTASWCMPSVAMNPFFEELALSYQ-DILFLTVDFDEVKGVAMKMEVKAMPTF 88

Query: 158 FFISPDPKKDAIRTEGLIPIQMMRDI 183
             +      D  R  G  PI++ + I
Sbjct: 89  ILMRKGSVSD--RVVGANPIELKKRI 112


>29801.m003173 thioredoxin m(mitochondrial)-type, putative
          Length = 110

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 16/71 (22%), Positives = 41/71 (57%)

Query: 99  NVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTLF 158
           + P++++F+A+WCGPC ++ + ++ +A EY        ++TD + + A   +++ +P + 
Sbjct: 21  DTPVLVEFHASWCGPCRMVHRVIDEIAGEYNGKLKCFILNTDSDLQIAESYEIKAVPVVM 80

Query: 159 FISPDPKKDAI 169
                 K++ +
Sbjct: 81  LFKNGEKRETV 91


>28076.m000415 protein disulfide isomerase, putative
          Length = 575

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 97  ERNVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIV-KVDTDEEYEFAHDMQVRGLP 155
           E+N  ++++FYA WCG C  +A E    A E +   +++ KVD  EE E A +  V+G P
Sbjct: 107 EKNKFVMVEFYAPWCGHCQALAPEYAAAASELKGEEVVLAKVDATEESELAQEYDVQGFP 166

Query: 156 TLFF 159
           T++F
Sbjct: 167 TVYF 170


>29915.m000489 Thioredoxin H-type, putative
          Length = 132

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 91  QELVRGERNVPIII-DFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDM 149
           Q+L    ++  I++ +F ATWCGPC ++A     L+ +Y S  + + +D DE  +F+   
Sbjct: 30  QKLSEASKDGKIVLANFSATWCGPCRMIAPFYRELSEKYPS-IMFLLIDVDELADFSSSW 88

Query: 150 QVRGLPTLFFI 160
            ++  PT FF+
Sbjct: 89  DIKATPTFFFL 99


>29653.m000292 Hsc70-interacting protein, putative
          Length = 378

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 103 IIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTLFFI 160
           ++ F ATWCGPC  ++     LA +Y    + +KVD DE  + A    +  +PT +FI
Sbjct: 296 VLYFTATWCGPCRFISPLFTSLAAKY-PKTVFLKVDIDEARDVAARWNISSVPTFYFI 352