Jatropha Genome Database

JcCB0010741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0010741.10 + phase: 1 /partial
         (151 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29703.m001477 acetyl-CoA carboxylase, putative                        135   1e-32

>29703.m001477 acetyl-CoA carboxylase, putative
          Length = 742

 Score =  135 bits (339), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/116 (58%), Positives = 77/116 (66%)

Query: 26  QDETRXXXXXXXXXXXXFRQKIGLDLSDDDETQHTTKFETASHPQGSXXXXXXXXXXXXX 85
           +DET+            FRQK+GLDLSDDD+TQH T  ETASHP G+             
Sbjct: 627 KDETKHLHIWHGAHHHHFRQKLGLDLSDDDKTQHMTDVETASHPPGTVVAPMAGLVVKVL 686

Query: 86  XXXXXXXEEGQPVLVLEAMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIKVS 141
                  EEGQP+LVLEAMKMEHVVKAP  GYV GLQVTAGQQ+SD++LLFSIKVS
Sbjct: 687 VQDGSKVEEGQPILVLEAMKMEHVVKAPFTGYVRGLQVTAGQQISDNSLLFSIKVS 742