Jatropha Genome Database

JcCB0009781.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0009781.20 + phase: 0 
         (368 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30152.m002425 conserved hypothetical protein                          679   0.0  
30152.m002426 conserved hypothetical protein                          528   e-150

>30152.m002425 conserved hypothetical protein
          Length = 361

 Score =  679 bits (1751), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/368 (88%), Positives = 346/368 (94%), Gaps = 7/368 (1%)

Query: 1   MDVPVIDLTRYLEIADKLSTEPAELSGQLEELGPWLGDLCKEVSRILRETGALVVKDPRC 60
           MD+PVIDLTRYLEIADKLS EP +L G++EEL       CKEVSRILRETGALVVKDPRC
Sbjct: 1   MDIPVIDLTRYLEIADKLSGEPVKLCGEVEEL-------CKEVSRILRETGALVVKDPRC 53

Query: 61  SAEDNDRFIDMMEKYFERPPEFKRMQERPQLHYQVGVTPEGVEVPRSLVDKEMQEKLESM 120
           S+EDNDRFIDMMEKYFE P +FK++QERP LHYQVGVTPEGVEVPRSLVD+EMQEKL++M
Sbjct: 54  SSEDNDRFIDMMEKYFESPLQFKKLQERPHLHYQVGVTPEGVEVPRSLVDEEMQEKLKAM 113

Query: 121 PKEFQPSTPRGPDPKWRYMWRVGPRPLDTRFKELNSEPVIPEGFPEWKETMDSWGHKMIS 180
           PK+FQPSTP+GPD KWRYMWRVG RP +TRFKELNSEPV+PEGFPEWKETMDSWGHKMIS
Sbjct: 114 PKQFQPSTPKGPDRKWRYMWRVGSRPSNTRFKELNSEPVVPEGFPEWKETMDSWGHKMIS 173

Query: 181 AIEAVAEMAAIGFGLSKDAFTSLMKQGPHLLAPTGSDLRCYGQEGTVFAGYHYDLNFLTI 240
           AIEAVAEMAAIGFGL KDAFTSLMKQGPHLLAPTGSDLRCYG+EGTVFAGYHYDLNFLTI
Sbjct: 174 AIEAVAEMAAIGFGLPKDAFTSLMKQGPHLLAPTGSDLRCYGEEGTVFAGYHYDLNFLTI 233

Query: 241 HGRSRFPGLNIWLRNGQKVEVKVPLGCLLIQTGKQIEWLTAGDCIAGLHEVVVTKRTIDA 300
           HGRSRFPGLNIWLRNGQKVEVKVPLGCLLIQTGKQIEWLTAGDCIAG+HEVVVTKRT DA
Sbjct: 234 HGRSRFPGLNIWLRNGQKVEVKVPLGCLLIQTGKQIEWLTAGDCIAGMHEVVVTKRTTDA 293

Query: 301 IKLASEQQRSLWRVSSTLFAHIASDAVLRPLGHFAEFPLASKYPPICAGEFVEQELAVIN 360
           IKLASEQ  SLWRVSSTLFAHIASDAVL+PLGHFAE PLASKYPPICAGEFVEQELAVIN
Sbjct: 294 IKLASEQNLSLWRVSSTLFAHIASDAVLQPLGHFAESPLASKYPPICAGEFVEQELAVIN 353

Query: 361 LKGSKGRS 368
           LKG+KG S
Sbjct: 354 LKGNKGES 361


>30152.m002426 conserved hypothetical protein
          Length = 349

 Score =  528 bits (1359), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 257/366 (70%), Positives = 306/366 (83%), Gaps = 18/366 (4%)

Query: 1   MDVPVIDLTRYLEIADKLSTEPAELSGQLEELGPWLGDLCKEVSRILRETGALVVKDPRC 60
           M++PVIDL++YLE+A+KLS +P +LSGQ +E GPWLG+LCKEVSRILRETGAL+++DPRC
Sbjct: 1   MELPVIDLSQYLEVAEKLSNDPEKLSGQFKEFGPWLGELCKEVSRILRETGALIIEDPRC 60

Query: 61  SAEDNDRFIDMMEKYFERPPEFKRMQERPQLHYQVGVTPEGVEVPRSLVDKEMQEKLESM 120
           SAEDND+F+D+MEK                   Q+G +P+G+EVPR +VD+ +QEK+++M
Sbjct: 61  SAEDNDKFLDLMEKK------------------QIGSSPDGLEVPRCVVDENIQEKVKAM 102

Query: 121 PKEFQPSTPRGPDPKWRYMWRVGPRPLDTRFKELNSEPVIPEGFPEWKETMDSWGHKMIS 180
           PK+ QP+ P GPD KWRYMWRVGP P +TRFK  N EP IPEGFPEWKE MD WG+KM++
Sbjct: 103 PKDSQPTLPDGPDRKWRYMWRVGPPPPNTRFKGFNMEPPIPEGFPEWKEVMDMWGYKMVN 162

Query: 181 AIEAVAEMAAIGFGLSKDAFTSLMKQGPHLLAPTGSDLRCYGQEGTVFAGYHYDLNFLTI 240
           A+ AVAE+AAIGFGL KDAFTSLMKQGP LL PTGSDL  Y +EGTVFAGYHYD NFLTI
Sbjct: 163 AVLAVAELAAIGFGLPKDAFTSLMKQGPQLLGPTGSDLSQYSEEGTVFAGYHYDTNFLTI 222

Query: 241 HGRSRFPGLNIWLRNGQKVEVKVPLGCLLIQTGKQIEWLTAGDCIAGLHEVVVTKRTIDA 300
           HGRSRFPGLNIWLR+GQK+EVKVP GCL +Q GKQ+EWLTAG+C+AG+HEVVVT RT +A
Sbjct: 223 HGRSRFPGLNIWLRSGQKLEVKVPSGCLFLQAGKQMEWLTAGECMAGMHEVVVTDRTKEA 282

Query: 301 IKLASEQQRSLWRVSSTLFAHIASDAVLRPLGHFAEFPLASKYPPICAGEFVEQELAVIN 360
           IK ASEQ RSLWRVSSTLF++IASDAVL+PLGHFAE PLAS YPP+ AGEF+EQEL+ IN
Sbjct: 283 IKKASEQNRSLWRVSSTLFSNIASDAVLKPLGHFAECPLASNYPPMFAGEFMEQELSAIN 342

Query: 361 LKGSKG 366
           L G  G
Sbjct: 343 LDGKVG 348