Jatropha Genome Database
- JcCB0009521.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0009521.30 + phase: 2 /partial
(383 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27810.m000635 DNA-damage-inducible protein f, putative 263 7e-71
30169.m006452 DNA-damage-inducible protein f, putative 219 2e-57
29606.m000098 DNA-damage-inducible protein f, putative 198 4e-51
29606.m000099 DNA-damage-inducible protein f, putative 189 2e-48
29820.m001007 DNA-damage-inducible protein f, putative 153 1e-37
29830.m001422 DNA-damage-inducible protein f, putative 126 1e-29
30122.m000355 DNA-damage-inducible protein f, putative 116 2e-26
>27810.m000635 DNA-damage-inducible protein f, putative
Length = 906
Score = 263 bits (673), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 150/213 (70%)
Query: 2 IFRNDELGXXXXXXXXXXXXXXXXXXXXXXXXTAFIGHIGPVELAAVGVSIAIFNQVSKI 61
+FR DELG TAFIGH+GPVELAAVGVSIA+FNQVSKI
Sbjct: 428 VFRKDELGIEIAQIAIPAALALAADPVASLIDTAFIGHLGPVELAAVGVSIAVFNQVSKI 487
Query: 62 AIFPLVSVTTSLVAKEDTTGILSTEVHETEKLEDGVAVNKEMEELLPKAESTHKPSSVSS 121
AIFPLVSVTTS VA+E+ TG LST V E LE G VNKEMEELLPK ST+K SSVSS
Sbjct: 488 AIFPLVSVTTSFVAEENATGKLSTHVQENASLEYGFTVNKEMEELLPKGASTNKTSSVSS 547
Query: 122 VCTKSDYERKHIPSASSALVVGCVLGLLQAFFLIFGAKPILNYMGVHSDSPMLIPAQQYL 181
TK ER+HIPSASSALVVGCVLG++QA LIF AK IL+YMGV+SDSPMLIPAQQYL
Sbjct: 548 TFTKRHDERRHIPSASSALVVGCVLGIIQALLLIFSAKTILSYMGVYSDSPMLIPAQQYL 607
Query: 182 TXXXXXXXXXXXXXXMQGVFRGIKDTKTPLFAT 214
MQGVFRGIKDTKTPL+AT
Sbjct: 608 VLRSLGAPAVLLSLAMQGVFRGIKDTKTPLYAT 640
Score = 217 bits (553), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/163 (71%), Positives = 131/163 (80%), Gaps = 1/163 (0%)
Query: 204 IKDTKTPLFATR-FMLLLRVIAATCCVTLAASLAARHGSTSMAAFQVCLQIWLATSLLAD 262
IKD + F F+LL+RVIA+T CVTLAASLAARHGSTSMAAFQVCLQI ++TSLLAD
Sbjct: 695 IKDLQFSQFLKNGFLLLMRVIASTFCVTLAASLAARHGSTSMAAFQVCLQIGMSTSLLAD 754
Query: 263 GLAVAGQAILATAFANKDYDKAKATTSRVLQFXXXXXXXXXXXXXXXXPFASGLFTEDIN 322
GLAVAGQAILA+AFAN DYDKAKAT SRVLQ FAS LFTEDI+
Sbjct: 755 GLAVAGQAILASAFANNDYDKAKATASRVLQLGLVLGLLLSVILLVGLQFASRLFTEDIS 814
Query: 323 VLRIISIGIPFVTATQPINVLAFVFDGVNYGASDFAYSAYSMS 365
VL +I++G+PFVTATQPINVLAFVFDG+NYGASDFAYSAYSM+
Sbjct: 815 VLHLITVGMPFVTATQPINVLAFVFDGINYGASDFAYSAYSMA 857
>30169.m006452 DNA-damage-inducible protein f, putative
Length = 522
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 144/219 (65%), Gaps = 6/219 (2%)
Query: 1 NIFRNDELGXXXXXXXXXXXXXXXXXXXXXXXXTAFIGHIGPVELAAVGVSIAIFNQVSK 60
N+ + DELG TAFIG IG VELAAVGVSIA+FNQVS+
Sbjct: 28 NVLKLDELGLEIARIALPAALALTADPIASLVDTAFIGQIGSVELAAVGVSIALFNQVSR 87
Query: 61 IAIFPLVSVTTSLVAKEDTTGILSTEVHETEKLEDGVAVNKEMEELLPKAEST----HKP 116
IAIFPLVS+TTS VA+EDT G ++ +V E+E LE G VN E +EL+P+ +S
Sbjct: 88 IAIFPLVSITTSFVAEEDTIGRMTPDVQESELLETGSTVN-ESKELIPQNDSASGAYKSK 146
Query: 117 SSVSSVCTKS-DYERKHIPSASSALVVGCVLGLLQAFFLIFGAKPILNYMGVHSDSPMLI 175
S +SS T + + ERKHIPSASSALV+G +LG +QA FLI GAKP+LN+MGV SDSPML
Sbjct: 147 SPISSFDTANIENERKHIPSASSALVIGAILGFVQAIFLISGAKPLLNFMGVSSDSPMLT 206
Query: 176 PAQQYLTXXXXXXXXXXXXXXMQGVFRGIKDTKTPLFAT 214
PAQQYLT MQGVFRG KDTKTPL+AT
Sbjct: 207 PAQQYLTLRSLGAPAILLSLAMQGVFRGFKDTKTPLYAT 245
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/149 (70%), Positives = 116/149 (77%)
Query: 216 FMLLLRVIAATCCVTLAASLAARHGSTSMAAFQVCLQIWLATSLLADGLAVAGQAILATA 275
F+LL+RVIA T CVTL+ASLAAR GS SMAAFQVCLQ+WLATSLLADGLAVAGQAILA+A
Sbjct: 319 FLLLMRVIAVTFCVTLSASLAARQGSISMAAFQVCLQVWLATSLLADGLAVAGQAILASA 378
Query: 276 FANKDYDKAKATTSRVLQFXXXXXXXXXXXXXXXXPFASGLFTEDINVLRIISIGIPFVT 335
FA +YDKA AT SRVLQ + + LFT D+NVL +ISIGIPFV
Sbjct: 379 FAKGEYDKAIATASRVLQLGLLLGLMLAVVLGLGLSYGARLFTSDVNVLHMISIGIPFVA 438
Query: 336 ATQPINVLAFVFDGVNYGASDFAYSAYSM 364
TQPIN LAFVFDGVN+GASDFAYSAYSM
Sbjct: 439 GTQPINALAFVFDGVNFGASDFAYSAYSM 467
>29606.m000098 DNA-damage-inducible protein f, putative
Length = 546
Score = 198 bits (503), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/149 (67%), Positives = 112/149 (75%)
Query: 216 FMLLLRVIAATCCVTLAASLAARHGSTSMAAFQVCLQIWLATSLLADGLAVAGQAILATA 275
F+LL RVIAAT CVTLAAS AAR GST MAAFQ+CLQ+WL +SLLADGLAVAGQAI+A A
Sbjct: 340 FLLLARVIAATICVTLAASRAARLGSTRMAAFQICLQVWLTSSLLADGLAVAGQAIIACA 399
Query: 276 FANKDYDKAKATTSRVLQFXXXXXXXXXXXXXXXXPFASGLFTEDINVLRIISIGIPFVT 335
FA KDY KA +RVLQ F G+F++D NVL IISIGIPFV
Sbjct: 400 FAEKDYQKATTAATRVLQMSFVLGLGLAAVVGIGLHFGDGIFSKDPNVLDIISIGIPFVA 459
Query: 336 ATQPINVLAFVFDGVNYGASDFAYSAYSM 364
ATQPIN +AFVFDGVN+GASDFAYSAYSM
Sbjct: 460 ATQPINSIAFVFDGVNFGASDFAYSAYSM 488
Score = 187 bits (476), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 109/245 (44%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 2 IFRNDELGXXXXXXXXXXXXXXXXXXXXXXXXTAFIGHIGPVELAAVGVSIAIFNQVSKI 61
+F+ DELG TAFIGH+GPVE+AAVGVSIAIFNQ SK+
Sbjct: 28 VFKTDELGLEILRIAVPAAMALAADPVASLIDTAFIGHLGPVEIAAVGVSIAIFNQASKV 87
Query: 62 AIFPLVSVTTSLVAKEDTTGILSTEVHE-----------------------TEKLEDGVA 98
IFPLVS+TTS VA+EDT ++ E E LE G A
Sbjct: 88 TIFPLVSITTSFVAEEDTFQRITNESQNGEGSEKDLPKTRDIKEVVPEDVMLENLEKGSA 147
Query: 99 VNKEMEELLP-----KAESTHKPSSVSSVCTKSDYE----RKHIPSASSALVVGCVLGLL 149
+ E ++ +P KA + PS K + + R+HIPSAS+AL+VG +LGL+
Sbjct: 148 TDSEKKDSIPGDANCKATTCKSPSFFEGKSIKDEQKNNKGRRHIPSASTALIVGGILGLV 207
Query: 150 QAFFLIFGAKPILNYMGVHSDSPMLIPAQQYLTXXXXXXXXXXXXXXMQGVFRGIKDTKT 209
QA FLIF AKP+L+ MGV S SPML PA++YLT MQGVFRG KDTKT
Sbjct: 208 QAIFLIFCAKPLLSIMGVKSGSPMLTPARKYLTLRALGSPAVLLSLAMQGVFRGFKDTKT 267
Query: 210 PLFAT 214
PL+AT
Sbjct: 268 PLYAT 272
>29606.m000099 DNA-damage-inducible protein f, putative
Length = 518
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 131/217 (60%), Gaps = 4/217 (1%)
Query: 2 IFRNDELGXXXXXXXXXXXXXXXXXXXXXXXXTAFIGHIGPVELAAVGVSIAIFNQVSKI 61
+F+ DELG TAFIGH+G VE+AAVGVSIAI NQ SK+
Sbjct: 28 VFKMDELGLDILRIAVPAAMALAADPVASLIDTAFIGHLGAVEIAAVGVSIAIINQASKV 87
Query: 62 AIFPLVSVTTSLVAKEDTTGILSTEVHETEKLEDGVAVNKEMEELLPK---AESTHKPS- 117
IFPLV +TTS VA+EDT +S E E E + N+ M+E+ P+ E+ K S
Sbjct: 88 TIFPLVYITTSFVAEEDTVQRISIESQNREGSEKDLPKNRNMKEVAPEDAMLENLEKDSI 147
Query: 118 SVSSVCTKSDYERKHIPSASSALVVGCVLGLLQAFFLIFGAKPILNYMGVHSDSPMLIPA 177
S K++ R+HIPSAS AL+VG VLGL+QA FLIF AKP+L+ MGV S SPML PA
Sbjct: 148 SGDEDKPKNNKGRRHIPSASIALIVGGVLGLMQAIFLIFCAKPLLSIMGVKSGSPMLTPA 207
Query: 178 QQYLTXXXXXXXXXXXXXXMQGVFRGIKDTKTPLFAT 214
++YLT MQGVFRG KDTKTPL+AT
Sbjct: 208 RKYLTLRALGSPAVLLSLAMQGVFRGFKDTKTPLYAT 244
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 93/149 (62%), Positives = 106/149 (71%)
Query: 216 FMLLLRVIAATCCVTLAASLAARHGSTSMAAFQVCLQIWLATSLLADGLAVAGQAILATA 275
F+LL R+IAAT LAAS AR GST MAAFQ+CLQ+WL +SLLADGL VAGQAI+A A
Sbjct: 312 FLLLARIIAATIFKVLAASRGARLGSTPMAAFQICLQVWLTSSLLADGLTVAGQAIIACA 371
Query: 276 FANKDYDKAKATTSRVLQFXXXXXXXXXXXXXXXXPFASGLFTEDINVLRIISIGIPFVT 335
FA KDY KA A +R+LQ F G+F++D NVL IISIGIPFV
Sbjct: 372 FAEKDYQKATAAATRILQMSFVLGLGLAAVVGVGLHFGDGIFSKDPNVLDIISIGIPFVA 431
Query: 336 ATQPINVLAFVFDGVNYGASDFAYSAYSM 364
ATQ IN +A VFDGVN+GASDFAYSAYSM
Sbjct: 432 ATQHINSIALVFDGVNFGASDFAYSAYSM 460
>29820.m001007 DNA-damage-inducible protein f, putative
Length = 560
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 182/429 (42%), Gaps = 93/429 (21%)
Query: 3 FRNDELGXXXXXXXXXXXXXXXXXXXXXXXXTAFIGHIGPVELAAVGVSIAIFNQVSKIA 62
FR DE+G TAFIGH G VELAAVGVS+++FN VSK+
Sbjct: 93 FRVDEIGIEILSIALPAALALAADPIASLVDTAFIGHTGAVELAAVGVSVSVFNLVSKLF 152
Query: 63 IFPLVSVTTSLVAKEDTTGILSTEVHETEKLEDGVAVNKEMEELLPKAESTHKPSSVSSV 122
PL++VTTS VA+E + LL KA++ + + S+
Sbjct: 153 NVPLLNVTTSFVAEE--------------------------QALLSKAKANNTSGIIISL 186
Query: 123 CTKSDYERK-HIPSASSALVVGCVLGLLQAFFLIFGAKPILNYMGVHSDSPMLIPAQQYL 181
++ + K ++P+ S++L + +G+ +A L FG+ ++N MG+ DSPM IPA+ +L
Sbjct: 187 YFENQEQGKAYLPAVSTSLALAAGVGIAEAIALFFGSGFLMNIMGIPVDSPMRIPAENFL 246
Query: 182 TXXXXXXXXXXXXXXMQGVFRGIKDTKTPLFATRFMLLLRVI---------------AAT 226
T QG FRG KDTKTPL+A LL I AA
Sbjct: 247 TWRAFGAPPIVIALAAQGTFRGFKDTKTPLYAIGAGNLLNAILDPILIFTFGFGIGGAAI 306
Query: 227 CCVTLAASLA-----ARHGSTSMAA----------------------FQVCLQIWLATSL 259
VT +A +G S+ + V L + LATS+
Sbjct: 307 ATVTSEYLIAFVLLWELNGKVSLISPNIDGRRVVSYLNSGGLLIGRTIAVLLTMTLATSM 366
Query: 260 LAD-------GLAVAGQAILATAFANK-----------------DYDKAKATTSRVLQFX 295
A G + Q LA + N +Y++A+ RVLQ
Sbjct: 367 AAREGPIPMAGHQICMQVWLAVSLLNDALALAGQALLASGFSQGNYEEARQVIYRVLQIG 426
Query: 296 XXXXXXXXXXXXXXXPFASGLFTEDINVLRIISIGIPFVTATQPINVLAFVFDGVNYGAS 355
S LF+ D VL I GI FV +QP+N +AFV DG+ YG S
Sbjct: 427 VVTGIALGVILSLGFGAFSSLFSTDSEVLEIAWSGILFVAGSQPMNAIAFVLDGLYYGVS 486
Query: 356 DFAYSAYSM 364
DF Y+AYSM
Sbjct: 487 DFGYAAYSM 495
>29830.m001422 DNA-damage-inducible protein f, putative
Length = 447
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 93/147 (63%)
Query: 218 LLLRVIAATCCVTLAASLAARHGSTSMAAFQVCLQIWLATSLLADGLAVAGQAILATAFA 277
LL R +AA +TL+ S+AAR G+ +MAA Q+CLQ+WL+ SLL D A + QA++A++ A
Sbjct: 244 LLGRTLAAVMTITLSTSMAARQGALAMAAHQICLQVWLSVSLLVDAQAASSQALIASSSA 303
Query: 278 NKDYDKAKATTSRVLQFXXXXXXXXXXXXXXXXPFASGLFTEDINVLRIISIGIPFVTAT 337
DY + K T L+ + LFT+D VL I+ G+ FVTA+
Sbjct: 304 KGDYSRVKEITFCSLKLGLFTGISLAIILGVSFSSLATLFTKDAEVLAIVRTGVLFVTAS 363
Query: 338 QPINVLAFVFDGVNYGASDFAYSAYSM 364
QPIN +A++FDG++YG SDF+Y+A+SM
Sbjct: 364 QPINAIAYIFDGLHYGISDFSYAAWSM 390
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 93/179 (51%), Gaps = 31/179 (17%)
Query: 34 TAFIGHIGPVELAAVGVSIAIFNQVSKIAIFPLVSVTTSLVAKEDTTGILSTEVHETEKL 93
TA++G +GP+ELA+ GVS++IFN +SK+ PL+SV TS VA++ + + +
Sbjct: 25 TAYVGRLGPLELASAGVSMSIFNIISKVFNIPLLSVATSFVAEDISR-------NANDSG 77
Query: 94 EDGVAVNKEMEELLPKAESTHKPSSVSSVCTKSDYERKHIPSASSALVVGCVLGLLQAFF 153
DG N + E RK +PS S+AL++ +GL +A
Sbjct: 78 SDGGDSNNIISE------------------------RKLLPSVSTALLLATGIGLFEALA 113
Query: 154 LIFGAKPILNYMGVHSDSPMLIPAQQYLTXXXXXXXXXXXXXXMQGVFRGIKDTKTPLF 212
+ G+ LN MG+ S SPM +PA+++L +QG+FRG KDTKTP+
Sbjct: 114 MYLGSGVFLNMMGISSASPMRVPAEKFLKIRAIGAPAVVLYLAIQGIFRGFKDTKTPVL 172
>30122.m000355 DNA-damage-inducible protein f, putative
Length = 605
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 23/180 (12%)
Query: 34 TAFIGHIGPVELAAVGVSIAIFNQVSKIAIFPLVSVTTSLVAKEDTTGILSTEVHETEKL 93
TA+IG +GPVEL + GVSI IFN +SK+ PL+SV TS VA+ E+ + K
Sbjct: 155 TAYIGRLGPVELGSAGVSITIFNNISKLFNMPLLSVATSFVAE---------EIAKNGK- 204
Query: 94 EDGVAVNKEMEELLPKAESTHKPSSVSSVCTKSDYERKHIPSASSALVVGCVLGLLQAFF 153
N +E+++ + + KP+ V + ERK + S S+AL++ +G+ +A
Sbjct: 205 ------NSSLEKVIQENSTNGKPTDVVA-------ERKQLSSVSTALLLAVGIGIFEAVA 251
Query: 154 LIFGAKPILNYMGVHSDSPMLIPAQQYLTXXXXXXXXXXXXXXMQGVFRGIKDTKTPLFA 213
L G P L MG+ DSPM IPA+++L +QGV RG KDTKTP+++
Sbjct: 252 LSLGRGPFLKLMGITLDSPMCIPAERFLFLRALGAPAFVVSLALQGVLRGFKDTKTPVYS 311
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 77/127 (60%)
Query: 238 RHGSTSMAAFQVCLQIWLATSLLADGLAVAGQAILATAFANKDYDKAKATTSRVLQFXXX 297
R G +MAA Q+C+Q+WLA SLL D A + QA++A+ + DY + ++ VL+
Sbjct: 400 RQGPVAMAAHQICMQVWLAVSLLTDAFAASAQALIASYSSKGDYKNVREVSNFVLKIGLL 459
Query: 298 XXXXXXXXXXXXXPFASGLFTEDINVLRIISIGIPFVTATQPINVLAFVFDGVNYGASDF 357
+ LFT+D VL I+ GI FV+A+QP+N LAF+FDG++YG SDF
Sbjct: 460 TGVSLAAILGVSFGSIATLFTKDAEVLGIVRTGILFVSASQPLNALAFIFDGLHYGVSDF 519
Query: 358 AYSAYSM 364
AY+A SM
Sbjct: 520 AYAARSM 526