Jatropha Genome Database

JcCB0008751.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0008751.20 - phase: 0 
         (256 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28660.m000190 conserved hypothetical protein                          314   3e-86
30009.m000836 conserved hypothetical protein                          203   6e-53
29983.m003232 conserved hypothetical protein                           88   4e-18
28694.m000668 conserved hypothetical protein                           61   7e-10
29439.m000217 syntaxin, plant, putative                                56   2e-08
29908.m006008 conserved hypothetical protein                           54   9e-08
29866.m000622 conserved hypothetical protein                           54   1e-07
30055.m001625 conserved hypothetical protein                           51   4e-07
29439.m000218 conserved hypothetical protein                           49   2e-06

>28660.m000190 conserved hypothetical protein
          Length = 253

 Score =  314 bits (805), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 176/256 (68%), Positives = 186/256 (72%), Gaps = 3/256 (1%)

Query: 1   MADQQRIHPVTQDVEAPQPPTAPLMPRNASKSDKGDPAVEENRYPPFQRTLPVIHSKPPK 60
           MADQQRIHPVT DVEAPQ PT PLMPRN+SKSD+GDPA ++  YPPFQRT PV HSKPPK
Sbjct: 1   MADQQRIHPVTHDVEAPQTPTVPLMPRNSSKSDQGDPAAQQ--YPPFQRTFPVKHSKPPK 58

Query: 61  KRRSCFCRCLCWTXXXXXXXXXXXXXXXXXXXXXFRPKLPKYSIDGLQITEFNLSTDSSL 120
           KR SC C+CLCWT                     FRPKLP +SID LQIT+FNLS+DSSL
Sbjct: 59  KR-SCCCKCLCWTLSLLLILIVVIGIIIGILYLVFRPKLPDFSIDRLQITQFNLSSDSSL 117

Query: 121 SAAFDVRITAENPNKKIGIYYEGGSHIGVLYLGTKLCEGSLPKFYQGHRNITVLNVPLQG 180
           SAAFDV ITA NPN+KIGIYYEGGSHIGV Y GTKLCEGSLPKFYQGH N TVLNVPL G
Sbjct: 118 SAAFDVTITATNPNEKIGIYYEGGSHIGVWYSGTKLCEGSLPKFYQGHENTTVLNVPLTG 177

Query: 181 QTQDAYGLFTSLQQQQQENGVIPLNLRVKQPXXXXXXXXXXXXXXXXXXXXXDVDSLSTA 240
            TQDA GL TSLQQQQQ  G+IPLNLRVKQP                     DVDSLST 
Sbjct: 178 HTQDAAGLLTSLQQQQQATGIIPLNLRVKQPVRIKLGKLKLFEIKFLVKCKLDVDSLSTN 237

Query: 241 NDIRIRNSSCKFRLRL 256
           NDI IRNSSCKF L L
Sbjct: 238 NDISIRNSSCKFSLNL 253


>30009.m000836 conserved hypothetical protein
          Length = 267

 Score =  203 bits (517), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 111/271 (40%), Positives = 152/271 (56%), Gaps = 19/271 (7%)

Query: 1   MADQQRIHPVTQDVEAPQPPTAPLMPRNASKSDKGDPAVEENRYPPFQRTL---PVIHSK 57
           M D Q+IHP+   V+   P   PL+P+++S S+KG+P   E++ PP Q ++    +    
Sbjct: 1   MTDSQKIHPM---VDMKAPSVFPLVPQSSSVSEKGNPLHHEHQPPPLQTSIRNRAIETET 57

Query: 58  PPKKR------------RSCFCRCLCWTXXXXXXXXXXXXXXXXXXXXXFRPKLPKYSID 105
            P  R            RSCFC+C+CWT                     F+PK+PKYS+D
Sbjct: 58  APNTRTTAPAAATTKTARSCFCKCICWTICLILFLLVIIGAIAGILYLIFQPKIPKYSVD 117

Query: 106 GLQITEFNLSTDSSLSAAFDVRITAENPNKKIGIYYEGGSHIGVLYLGTKLCEGSLPKFY 165
            L+I++  L+ D +L A F+V+ITA NPNKKIGIYY+ G  + V Y+ T LC GS+P FY
Sbjct: 118 SLRISDLRLNFDMTLYAKFNVKITANNPNKKIGIYYDKGGQLSVWYIDTMLCAGSIPTFY 177

Query: 166 QGHRNITVLNVPLQGQTQDAYGLFTSLQQQQQENGVIPLNLRVKQPXXXXXXXXXXXXXX 225
           QGHRN T L+V L GQ+Q    L T+LQ+QQQ  G IPL+L+V  P              
Sbjct: 178 QGHRNTTKLDVSLSGQSQYGSTLMTALQEQQQ-TGSIPLDLKVSAPVAVKLGRLKLRKVR 236

Query: 226 XXXXXXXDVDSLSTANDIRIRNSSCKFRLRL 256
                   VDSL+T N + I+ S+CKFRL+L
Sbjct: 237 ILGDCLLVVDSLTTNNLLSIKTSNCKFRLKL 267


>29983.m003232 conserved hypothetical protein
          Length = 236

 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 1/162 (0%)

Query: 95  FRPKLPKYSIDGLQITEFNLSTDSSLSAAFDVRITAENPNKKIGIYYEGGSHIGVLYLGT 154
            +P++P Y++D   +  FN+  D SL   F V + ++NPN  IG  Y   S + V Y  +
Sbjct: 76  LQPEIPHYNVDRFDVHAFNVQPDFSLYTEFVVTVKSDNPNMHIGFDYGKESSVVVTYRDS 135

Query: 155 KLCEGSLPKFYQGHRNITVLNVPLQGQTQDAYGLFTSLQQQQQENGVIPLNLRVKQPXXX 214
            LC GS+P F+Q H NI+++ + L+G+++   GL  +L Q +   G IPL + VK P   
Sbjct: 136 PLCSGSIPTFHQPHHNISLIPIVLKGKSEFGSGLQEALMQNRN-TGRIPLLVEVKAPVSI 194

Query: 215 XXXXXXXXXXXXXXXXXXDVDSLSTANDIRIRNSSCKFRLRL 256
                              VD+LS     +I +SS ++ + L
Sbjct: 195 VVQELPLRQVTVLINCSLVVDNLSPNKKAKILSSSYQYGVEL 236


>28694.m000668 conserved hypothetical protein
          Length = 263

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 3/117 (2%)

Query: 60  KKRRSCFCRCLCWTXXXXXXXXXXXXXXXXXXXXXFRPKLPKYSIDGLQITEFNLSTDSS 119
           + RR CFC C  W                      +RP  P +++   +++  NL++ S 
Sbjct: 54  RSRRRCFCFCCIWVTIIILTLILLAAIAGAILYVIYRPHRPTFTVSAFKVSSLNLTSTSH 113

Query: 120 LSAAFDVRITAENPNKKIGIYYEGGSHIGVLYLGTKLCEGS--LPKFYQGHRNITVL 174
           LS   ++ IT +NPNKK+ +Y      I V      +  G+  LP F  G +N T+L
Sbjct: 114 LSTNINMNITTKNPNKKL-VYIYNPVTISVTTAKDDIVIGNGLLPSFVHGAKNTTLL 169


>29439.m000217 syntaxin, plant, putative
          Length = 219

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 2/86 (2%)

Query: 96  RPKLPKYSIDGLQITEFNLSTDSSLSAAFDVRITAENPNKKIGIYYEGGSHIGVLYLGTK 155
           RP   K+ +    ++EFN++ +++L     + IT  NPNKKIGIYY+     G  Y   +
Sbjct: 64  RPNKVKFHVTEANLSEFNIN-NNTLHYNLALNITVRNPNKKIGIYYDRIEARGK-YEDQR 121

Query: 156 LCEGSLPKFYQGHRNITVLNVPLQGQ 181
                L  FYQGH+N ++L    QGQ
Sbjct: 122 FGSQFLTPFYQGHKNTSILTPAFQGQ 147


>29908.m006008 conserved hypothetical protein
          Length = 243

 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 5/141 (3%)

Query: 43  RYPPFQRTLPVI-HSKPPKKRRSCFCRCLCWTXXXXXXXXXXXXXXXXXXXXXFRPKLPK 101
           R PP +  L V  H  P +K+R+ +C   C                       F+ K P+
Sbjct: 47  RVPPPENALIVERHRNPQQKKRTRYCSFFCCCFLIVATAVIAIALGIGLSFAFFKSKNPE 106

Query: 102 YSIDGLQITEFNLSTDSSLSAAFDVRITAENPNKKIGIYYEGGSHIGVLYLGTKLCEGSL 161
           + +    +     +  S     +D+ +   NPN K  I Y  G    +LY   K+  G  
Sbjct: 107 FRVQRFIVK----NNTSHHYPDYDITLKVRNPNDKSDILYMQGGVASLLYKDQKMAAGKF 162

Query: 162 PKFYQGHRNITVLNVPLQGQT 182
           P F+Q ++N T + + L+GQ+
Sbjct: 163 PTFHQDNKNSTYIGIVLKGQS 183


>29866.m000622 conserved hypothetical protein
          Length = 212

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 2/114 (1%)

Query: 96  RPKLPKYSIDGLQITEFNLSTDSSLSAAFDVRITAENPNKKIGIYYEGGSHIGVLYLGTK 155
           RP  P++S+    + + N+S  + L+++  + + ++NPN K+GIYY+        Y G +
Sbjct: 51  RPTKPEFSLKEADVYQLNISGPNLLNSSIQLTLLSKNPNDKVGIYYDELQAYAA-YKGQQ 109

Query: 156 L-CEGSLPKFYQGHRNITVLNVPLQGQTQDAYGLFTSLQQQQQENGVIPLNLRV 208
           +  + +LP FYQGH++  +L   L G        F     + Q  G + L+L+V
Sbjct: 110 ITVDTTLPPFYQGHQDSNLLTASLIGSGLPVASSFGYEVGRDQTVGKLVLSLKV 163


>30055.m001625 conserved hypothetical protein
          Length = 210

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 2/115 (1%)

Query: 95  FRPKLPKYSIDGLQITEFNLSTDSSLSAAFDVRITAENPNKKIGIYYEGGSHIGVLYLGT 154
            +P  P++ +    +     S  + L++   V ++ +NPN++IGIYYE    I   Y   
Sbjct: 41  LQPHKPRFILQDATVNALTFSGTNFLTSNIQVTLSTKNPNERIGIYYE-KLDIYASYRNQ 99

Query: 155 KLCEGS-LPKFYQGHRNITVLNVPLQGQTQDAYGLFTSLQQQQQENGVIPLNLRV 208
           ++  G+ LP+ YQGH++IT+ +  L G +        S   +  + G + +N++V
Sbjct: 100 QMTLGTQLPRSYQGHKDITIWSPFLYGNSVPMSPYLASALNEDLDAGAVLVNIKV 154


>29439.m000218 conserved hypothetical protein
          Length = 209

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 41/86 (47%)

Query: 95  FRPKLPKYSIDGLQITEFNLSTDSSLSAAFDVRITAENPNKKIGIYYEGGSHIGVLYLGT 154
            RP  PK+ +  + +  FN ST + L++ F +  +  NPN K+GIYY+            
Sbjct: 42  LRPSKPKFVLQDVTVFAFNASTPNYLTSNFQITFSTRNPNDKVGIYYDKLDVYATYRNQQ 101

Query: 155 KLCEGSLPKFYQGHRNITVLNVPLQG 180
                ++P  YQGH  I V +  + G
Sbjct: 102 ITLRSAIPTNYQGHEEINVWSPNIYG 127