Jatropha Genome Database

JcCB0008631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0008631.10 - phase: 0 
         (446 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28176.m000273 Omega-3 fatty acid desaturase, chloroplast precurs...   703   0.0  
29814.m000719 Omega-3 fatty acid desaturase, chloroplast precursor    648   0.0  
29681.m001360 Omega-3 fatty acid desaturase, endoplasmic reticul...   552   e-157
29613.m000358 omega-6 desaturase, endoplasmic reticulum               194   5e-50
28035.m000362 oleate 12-hydroxylase                                   192   3e-49
29696.m000105 Omega-6 fatty acid desaturase, chloroplast precurs...   102   5e-22

>28176.m000273 Omega-3 fatty acid desaturase, chloroplast precursor,
           putative
          Length = 452

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/454 (77%), Positives = 376/454 (82%), Gaps = 10/454 (2%)

Query: 1   MASWVLSECGLKPL--PQFFARPRTGAVLRTNSSKPRFLQTSKT---VTDLRQ-PF-SFG 53
           MASWV+SECGLKPL  PQ F+R RTG V  +N SKPRFL  SK+    TDL++ PF SF 
Sbjct: 1   MASWVISECGLKPLSQPQKFSRTRTGVVSNSNFSKPRFLHISKSTNAATDLKKLPFVSFS 60

Query: 54  -ERSWRVKVSAPYRVXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLSDIRAAIPKHC 112
            E++W  KVSAPYR                        FDPGAPPPFKLSDIRAAIPKHC
Sbjct: 61  REKTWGAKVSAPYR--SASIEDEEEKNGSIGIEKEEAEFDPGAPPPFKLSDIRAAIPKHC 118

Query: 113 WVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGS 172
           W+K+ W+SMSYVVRD                    PLYWAAQGTMFWALFVLGHDCGHGS
Sbjct: 119 WIKNSWRSMSYVVRDVAVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGS 178

Query: 173 FSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFRNLDNI 232
           FSNN KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL EKIFRNLD I
Sbjct: 179 FSNNNKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIFRNLDGI 238

Query: 233 TRKLRFTVPFPMLAYPFYLWNRSPGKTGSHFHPDSDLFLPNERKDVITSTICWTAMAALL 292
           TR LRF++PFPMLAYPFYLW+RSPGKTGSHFHPDSDLF+ NERKDVITST+CWTAM ALL
Sbjct: 239 TRTLRFSLPFPMLAYPFYLWSRSPGKTGSHFHPDSDLFVKNERKDVITSTVCWTAMVALL 298

Query: 293 VGLSFVMGPIQLLKLYGIPYWGFVMWLDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLTTL 352
           VGLSFVMGPIQLLKLYGIPYW FVMWLD VTY+HHHGHE+KLPWYRG EWSYLRGGLTTL
Sbjct: 299 VGLSFVMGPIQLLKLYGIPYWVFVMWLDSVTYMHHHGHEDKLPWYRGKEWSYLRGGLTTL 358

Query: 353 DRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPEKSGPLPFHLI 412
           DRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREP+KSG LPFHLI
Sbjct: 359 DRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKKSGLLPFHLI 418

Query: 413 GSLVRSLRKDHYVSDTGDVVYYQTDRQLSGSTSE 446
             L+RSL+KDHYVSDTGDV+YYQTD QLSG++SE
Sbjct: 419 EDLIRSLKKDHYVSDTGDVLYYQTDPQLSGTSSE 452


>29814.m000719 Omega-3 fatty acid desaturase, chloroplast precursor
          Length = 460

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/456 (69%), Positives = 355/456 (77%), Gaps = 12/456 (2%)

Query: 2   ASWVLSECGLKPLPQFFARPRTGAVLRT-NSSKPRFLQTSKTVTDLRQPFSFG------E 54
           A WVLSECGL+PLP+ ++RPR G   +T N  K R L  SK+  +L   F         +
Sbjct: 3   AGWVLSECGLRPLPRIYSRPRIGFTSKTTNLLKLRELPDSKSY-NLCSSFKVSSWSNSKQ 61

Query: 55  RSWRVKVSAPYRVXXXXXXXXXXXXX----XXXXXXXXXXFDPGAPPPFKLSDIRAAIPK 110
            +W + V+ P  V                           FD GAPPPF L+DIRAAIPK
Sbjct: 62  SNWALNVAVPVNVSTVSGEDDREREEFNGIVNVDEGKGEFFDAGAPPPFTLADIRAAIPK 121

Query: 111 HCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGH 170
           HCWVK+PW+SMSYV+RD                    PLYW  QGTMFWALFVLGHDCGH
Sbjct: 122 HCWVKNPWRSMSYVLRDVVVVFGLAAVAAYFNNWVAWPLYWFCQGTMFWALFVLGHDCGH 181

Query: 171 GSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFRNLD 230
           GSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL EKIF++LD
Sbjct: 182 GSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIFKSLD 241

Query: 231 NITRKLRFTVPFPMLAYPFYLWNRSPGKTGSHFHPDSDLFLPNERKDVITSTICWTAMAA 290
           N+T+ LRF++PFPMLAYPFYLW+RSPGK GSHFHPDS LF+P ERKD+ITST CWTAMAA
Sbjct: 242 NVTKTLRFSLPFPMLAYPFYLWSRSPGKKGSHFHPDSGLFVPKERKDIITSTACWTAMAA 301

Query: 291 LLVGLSFVMGPIQLLKLYGIPYWGFVMWLDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLT 350
           LLV L+F MGP+Q+LKLYGIPYW FVMWLDFVTYLHHHGHE+KLPWYRG  WSYLRGGLT
Sbjct: 302 LLVYLNFSMGPVQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKAWSYLRGGLT 361

Query: 351 TLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPEKSGPLPFH 410
           TLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHL+EATEAAKPV+GKYYREP+KSGPLP H
Sbjct: 362 TLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVMGKYYREPKKSGPLPLH 421

Query: 411 LIGSLVRSLRKDHYVSDTGDVVYYQTDRQLSGSTSE 446
           L+GSLVRS+++DHYVSDTGDVVYYQ D +LSG   E
Sbjct: 422 LLGSLVRSMKEDHYVSDTGDVVYYQKDPKLSGIGGE 457


>29681.m001360 Omega-3 fatty acid desaturase, endoplasmic reticulum,
           putative
          Length = 506

 Score =  552 bits (1423), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 256/350 (73%), Positives = 291/350 (83%)

Query: 91  FDPGAPPPFKLSDIRAAIPKHCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPLY 150
           FDP  PPPFK+++IRAAIPKHCW+K+PW+S+SYV+RD                    PLY
Sbjct: 78  FDPSDPPPFKIAEIRAAIPKHCWIKNPWRSLSYVLRDAFVVLALAAAALFLDSWCFWPLY 137

Query: 151 WAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG 210
           WAAQGTMFWA+FVLGHDCGHGSFS++  LN+VVGHLLHSSILVPYHGWRISHRTHHQNHG
Sbjct: 138 WAAQGTMFWAIFVLGHDCGHGSFSDSTLLNNVVGHLLHSSILVPYHGWRISHRTHHQNHG 197

Query: 211 HVENDESWHPLPEKIFRNLDNITRKLRFTVPFPMLAYPFYLWNRSPGKTGSHFHPDSDLF 270
           +V+ DESW PLPEKI+ +LD  TR +RFTVP P+LAYP YLW R PGK GSHF P SDLF
Sbjct: 198 NVDKDESWVPLPEKIYNSLDVSTRIMRFTVPLPLLAYPIYLWTRGPGKDGSHFSPYSDLF 257

Query: 271 LPNERKDVITSTICWTAMAALLVGLSFVMGPIQLLKLYGIPYWGFVMWLDFVTYLHHHGH 330
            PNER+ V+TST+CW  M  LL+   FV G +Q+LKLYG+PY  F+MWLDFVTYLHHHGH
Sbjct: 258 APNERRAVLTSTVCWILMILLLLYSCFVFGSVQVLKLYGVPYIIFIMWLDFVTYLHHHGH 317

Query: 331 EEKLPWYRGNEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAA 390
           E+KLPWYRG EWSYLRGGLTT+DRDYGWINNIHHDIGTHVIHHLFPQIPHYHL+EAT+AA
Sbjct: 318 EQKLPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATKAA 377

Query: 391 KPVLGKYYREPEKSGPLPFHLIGSLVRSLRKDHYVSDTGDVVYYQTDRQL 440
           KPVLGKYYREP KSGP P HL  +LV+S+ +DHYVSD GDVVYYQTD +L
Sbjct: 378 KPVLGKYYREPRKSGPFPLHLFENLVKSISQDHYVSDIGDVVYYQTDPEL 427


>29613.m000358 omega-6 desaturase, endoplasmic reticulum
          Length = 383

 Score =  194 bits (494), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 117/323 (36%), Positives = 167/323 (51%), Gaps = 18/323 (5%)

Query: 93  PGAPPPFKLSDIRAAIPKHCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPL--- 149
           P + PPF L  I+ AIP HC+ +   +S SYVV D                    PL   
Sbjct: 25  PSSKPPFTLGQIKKAIPPHCFKRSIPRSFSYVVYDLTIAFLFYYVATNYFHLLPEPLSYV 84

Query: 150 ----YWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTH 205
               YWA QG +   ++V+ H+CGH +FS+   L+ VVG +LHS +LVPY  W+ SHR H
Sbjct: 85  AWPIYWALQGCVLTGVWVIAHECGHHAFSDYQLLDDVVGLILHSCLLVPYFSWKHSHRRH 144

Query: 206 HQNHGHVENDESWHPLPEKIFR----NLDNITRKLRFTVPFPMLAYPFYLWNRSPGKT-- 259
           H N G +E DE + P  +   R     L+N   ++        L +P YL     G+   
Sbjct: 145 HSNTGSLERDEVFVPKKKSSIRWYSKYLNNPPGRIMTIAVTLTLGWPLYLAFNVSGRPYD 204

Query: 260 --GSHFHPDSDLFLPNERKDVITSTICWTAMAALLVGLSFVMGPIQLLKLYGIPYWGFVM 317
               H+ P   ++   ER ++  S     A+   L  L+   G   ++ +YG+P      
Sbjct: 205 RFACHYDPYGPIYNDRERIEIFISDAGVLAVTFGLYQLAIAKGLAWVVCVYGVPLLVVNS 264

Query: 318 WLDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHHLFP 376
           +L  +T+L H      LP Y  +EW +LRG L T+DRDYG +N + H+I  THV HHLF 
Sbjct: 265 FLVLITFLQH--THPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFS 322

Query: 377 QIPHYHLIEATEAAKPVLGKYYR 399
            +PHYH +EAT+A KP+LG+YY+
Sbjct: 323 TMPHYHAMEATKAIKPILGEYYQ 345


>28035.m000362 oleate 12-hydroxylase
          Length = 387

 Score =  192 bits (488), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 166/323 (51%), Gaps = 18/323 (5%)

Query: 93  PGAPPPFKLSDIRAAIPKHCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPL--- 149
           P   PPF L D++ AIP HC+ +   +S SYV  D                    PL   
Sbjct: 29  PHTKPPFTLGDLKRAIPPHCFERSFVRSFSYVAYDVCLSFLFYSIATNFFPYISSPLSYV 88

Query: 150 ----YWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTH 205
               YW  QG +   L+V+GH+CGH +FS     + +VG ++HS++LVPY  W+ SHR H
Sbjct: 89  AWLVYWLFQGCILTGLWVIGHECGHHAFSEYQLADDIVGLIVHSALLVPYFSWKYSHRRH 148

Query: 206 HQNHGHVENDESWHPLPEKIF----RNLDNITRKLRFTVPFPMLAYPFYLWNRSPG---- 257
           H N G +E DE + P  +       + L+N   ++       +L +P YL     G    
Sbjct: 149 HSNIGSLERDEVFVPKSKSKISWYSKYLNNPPGRVLTLAATLLLGWPLYLAFNVSGRPYD 208

Query: 258 KTGSHFHPDSDLFLPNERKDVITSTICWTAMAALLVGLSFVMGPIQLLKLYGIPYWGFVM 317
           +   H+ P   +F   ER  +  + +   A   +L   +   G   ++++YG+P      
Sbjct: 209 RFACHYDPYGPIFSERERLQIYIADLGIFATTFVLYQATMAKGLAWVMRIYGVPLLIVNC 268

Query: 318 WLDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLTTLDRDYGWINNIHHDIG-THVIHHLFP 376
           +L  +TYL H      +P Y  +EW +LRG + T+DRDYG +N + H+I  THV HHLF 
Sbjct: 269 FLVMITYLQH--THPAIPRYGSSEWDWLRGAMVTVDRDYGVLNKVFHNIADTHVAHHLFA 326

Query: 377 QIPHYHLIEATEAAKPVLGKYYR 399
            +PHYH +EAT+A KP++G+YYR
Sbjct: 327 TVPHYHAMEATKAIKPIMGEYYR 349


>29696.m000105 Omega-6 fatty acid desaturase, chloroplast precursor,
           putative
          Length = 440

 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 116/266 (43%), Gaps = 37/266 (13%)

Query: 148 PLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQ 207
           PL WA  GT     FV+GHDC H SFS N  +  +VG L    ++ PY  WR  H  HH 
Sbjct: 150 PLAWAWTGTAITGFFVIGHDCAHKSFSKNKLVEDIVGTLAFMPLIYPYEPWRFKHDRHHA 209

Query: 208 NHGHVENDESWHPLPEKIFRNLDNITRKLRFTVPFPMLAY----PFYLWNRSPGKTGSHF 263
                                    +  L F  P P  A     P  L    P  + +H+
Sbjct: 210 KTNMCVRH-----------------SFSLYFLCPNPNCATSWESPSIL--NMPWMSIAHW 250

Query: 264 ---HPDSDLFLPNERKDVITSTICWTAMAA----LLVGLSFVMGPIQLLKLYGIPYWGFV 316
              H D   F PNE K V  S  C  A  A    L+V  + +MG I   K + +P+ G+ 
Sbjct: 251 LIWHFDIKKFRPNEVKRVKISLACVFAFMAIGWPLIVYKTGIMGWI---KFWLMPWLGYH 307

Query: 317 MWLDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLT-TLDRDY-GWINNIHHDIGTHVIHHL 374
            W+   T +HH      +P+   +EW+  +  L  T+  DY  WI  + H+I  H+ HH+
Sbjct: 308 FWMSTFTMVHHTA--PHIPFKSSDEWNAAQAQLNGTVHCDYPRWIEILCHNINVHIPHHI 365

Query: 375 FPQIPHYHLIEATEAAKPVLGKYYRE 400
             +IP Y+L EA  + +   GKY  E
Sbjct: 366 SSRIPSYNLPEAHISIQEKWGKYLNE 391