Jatropha Genome Database

JcCB0008031.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0008031.30 - phase: 0 
         (313 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29950.m001178 syntaxin, arabidopsis thaliana, putative                540   e-154
29917.m001968 syntaxin, arabidopsis thaliana, putative                281   3e-76
29333.m001054 syntaxin, arabidopsis thaliana, putative                273   5e-74
30131.m007049 syntaxin, arabidopsis thaliana, putative                248   2e-66
30086.m000215 syntaxin, arabidopsis thaliana, putative                238   3e-63
29634.m002119 syntaxin, arabidopsis thaliana, putative                236   1e-62
30072.m000983 syntaxin, arabidopsis thaliana, putative                214   6e-56

>29950.m001178 syntaxin, arabidopsis thaliana, putative
          Length = 313

 Score =  540 bits (1391), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 267/313 (85%), Positives = 278/313 (88%)

Query: 1   MNDLMTKSFISYVDLKKEAMKDLEAGPDPDVEMANASNTMDQNLGLFLEEAEIVKKEMGS 60
           MNDLMTKSF SYVDLKKEAM+DLEAGPDPD+EMANASNTMD+NLGLFLEEAE VKKEM S
Sbjct: 1   MNDLMTKSFTSYVDLKKEAMRDLEAGPDPDLEMANASNTMDRNLGLFLEEAENVKKEMES 60

Query: 61  IREILDSLQQSNEESKSLHKSEAVKSLRNIINADIVTVLKKARAIRAQLEEMDRANEANR 120
           IR++L  LQ+SNEESKSLHK EA+K LRN INADIVTV KKARAI+ QLEEMDRAN ANR
Sbjct: 61  IRDVLVRLQESNEESKSLHKPEALKLLRNKINADIVTVQKKARAIKTQLEEMDRANAANR 120

Query: 121 RLSAFKEGTPIYRTRIAVTNGLRKKLKELMMDFQGLRQKMMAEYKETVGRRYFTVTGEYP 180
           RLS FKEGTPIYRTR+AVTNGLRKKLKELMMDFQGLRQKMM EYKETVGRRYFTVTGEYP
Sbjct: 121 RLSGFKEGTPIYRTRVAVTNGLRKKLKELMMDFQGLRQKMMTEYKETVGRRYFTVTGEYP 180

Query: 181 DEEVIEKIISDDNGGEEFLKRAIQEHGKGKVLETVVEIQDRHDAAKEIEKSLLELHQVFL 240
           DEE+I+KIISD NGGEEFLK AIQEHGKGKVLETVVEIQDRHDAAKEIEKSLLELHQVFL
Sbjct: 181 DEEIIDKIISDGNGGEEFLKCAIQEHGKGKVLETVVEIQDRHDAAKEIEKSLLELHQVFL 240

Query: 241 DMAVMVEAQGEQLDDIEHHVLNASHYVKDGAKELKTAKDYQRSSRKWXXXXXXXXXXXXX 300
           DMAVMVEAQGEQLDDIEHHVLNASHYVKDGAKELKTAKDYQR SRKW             
Sbjct: 241 DMAVMVEAQGEQLDDIEHHVLNASHYVKDGAKELKTAKDYQRGSRKWMCIGIILLLIIIL 300

Query: 301 XXXXXXATSFSHS 313
                 ATSFSHS
Sbjct: 301 VIVIPIATSFSHS 313


>29917.m001968 syntaxin, arabidopsis thaliana, putative
          Length = 302

 Score =  281 bits (718), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 144/288 (50%), Positives = 204/288 (70%), Gaps = 14/288 (4%)

Query: 1   MNDLMTKSFISYVDLKKEA-MKDLEAGPDPDVEMANASNTMDQNLGLFLEEAEIVKKEMG 59
           MNDL + SF  Y DLK++A + D+EAG +P             NL  F E+ E VK++M 
Sbjct: 1   MNDLFSSSFKKYTDLKQQAYLDDMEAGKEP------------MNLDKFFEDVENVKEDMK 48

Query: 60  SIREILDSLQQSNEESKSLHKSEAVKSLRNIINADIVTVLKKARAIRAQLEEMDRANEAN 119
            + ++  SLQ++NEESK++H ++ +K++R  +++D+  VLK+A+ I+ +LE ++R+N A 
Sbjct: 49  LVEKLYKSLQEANEESKTVHNAKTMKNIRARMDSDVEQVLKRAKIIKGKLEALERSNAAA 108

Query: 120 RRLSAFKEGTPIYRTRIAVTNGLRKKLKELMMDFQGLRQKMMAEYKETVGRRYFTVTGEY 179
           R +     G+   RTR +V +GL KKLK+LM +FQ LR +M AEYKETV RRYFT+TGE 
Sbjct: 109 RNVPGCGPGSSADRTRTSVVSGLGKKLKDLMDEFQNLRAQMTAEYKETVERRYFTITGEK 168

Query: 180 PDEEVIEKIISDDNGGEEFLKRAIQEHGKGKVLETVVEIQDRHDAAKEIEKSLLELHQVF 239
             EE IE +IS     E FL+ AIQ+ G+G++L+T+ EIQ+RHDA KEIEK+L+ELHQVF
Sbjct: 169 ASEETIENLISSGE-SESFLQIAIQDQGRGQILDTISEIQERHDAVKEIEKNLIELHQVF 227

Query: 240 LDMAVMVEAQGEQLDDIEHHVLNASHYVKDGAKELKTAKDYQRSSRKW 287
           LDMA +VEAQG QL+DIE HV +AS +V+ G   L+ A++YQ+SSRKW
Sbjct: 228 LDMAALVEAQGHQLNDIESHVAHASSFVRRGTDNLQDAREYQKSSRKW 275


>29333.m001054 syntaxin, arabidopsis thaliana, putative
          Length = 348

 Score =  273 bits (699), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 139/288 (48%), Positives = 201/288 (69%), Gaps = 10/288 (3%)

Query: 1   MNDLMTKSFISYVDLKKEAMKDLEAGPDPDV-EMANASNTMDQNLGLFLEEAEIVKKEMG 59
           MNDL + SF  +        ++ +  PD  V +M    +T   NL  F E+ E VK E+ 
Sbjct: 1   MNDLFSGSFSRF--------RNEQGSPDHHVIQMTETPSTGGVNLDKFFEDVESVKDELK 52

Query: 60  SIREILDSLQQSNEESKSLHKSEAVKSLRNIINADIVTVLKKARAIRAQLEEMDRANEAN 119
            +  + +SLQ ++E+SK+LH ++ VK LR+ ++AD+   LKKA+ I+ +LE +DR+N AN
Sbjct: 53  ELERLNESLQSAHEQSKTLHNAKTVKDLRSRMDADVAQALKKAKLIKVRLEALDRSNAAN 112

Query: 120 RRLSAFKEGTPIYRTRIAVTNGLRKKLKELMMDFQGLRQKMMAEYKETVGRRYFTVTGEY 179
           R L     G+   RTR +V NGLRKKLK+ M  F  LR+K+  EY+ETV RRY+TVTGE 
Sbjct: 113 RSLPGCGPGSSSDRTRTSVVNGLRKKLKDSMESFSSLREKISTEYRETVQRRYYTVTGEN 172

Query: 180 PDEEVIEKIISDDNGGEEFLKRAIQEHGKGKVLETVVEIQDRHDAAKEIEKSLLELHQVF 239
           PDE+ ++++IS     E FL++AIQE G+G++L+T+ EIQ+RHDA KE+EK+L ELHQVF
Sbjct: 173 PDEKTLDRLISTGE-SETFLQKAIQEQGRGRILDTINEIQERHDAVKEMEKNLKELHQVF 231

Query: 240 LDMAVMVEAQGEQLDDIEHHVLNASHYVKDGAKELKTAKDYQRSSRKW 287
           LDMAV+V+AQGEQLDDIE ++  AS +V+ G ++L+TA+  Q+++RKW
Sbjct: 232 LDMAVLVQAQGEQLDDIESNMQRASSFVRGGTQQLQTARTLQKNTRKW 279


>30131.m007049 syntaxin, arabidopsis thaliana, putative
          Length = 296

 Score =  248 bits (634), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 135/288 (46%), Positives = 208/288 (72%), Gaps = 14/288 (4%)

Query: 1   MNDLMTKSFISYVDLKKEAMKDLEAGPDPDVEMANASNTMDQNLGLFLEEAEIVKKEMGS 60
           MNDLMT+SF+SYV+LKK+AM+D+E+  +PD+EM       ++NL  F EE   +K EM  
Sbjct: 1   MNDLMTQSFLSYVELKKQAMRDMES--EPDLEMGELDPADEKNLTKFFEEVNGIKTEMEE 58

Query: 61  IREILDSLQQSNEESKSLHKSEAVKSLRNIINADIVTVLKKARAIRAQLEEMDRANEANR 120
           I  +L  LQ  NE+SKS H ++ +K +R+ IN+D+VT+L+KA+ I+++LE +D++N ANR
Sbjct: 59  ITNLLLDLQDLNEDSKSTHSTKVLKGIRDRINSDMVTILRKAKIIKSRLESLDKSNVANR 118

Query: 121 RLS-AFKEGTPIYRTRIAVTNGLRKKLKELMMDFQGLRQKMMAEYKETVGRRYFTVTGEY 179
            LS A+KEG+PI RTR++VT+GLR KL+E+M  FQ LR++++ +++E + RRY+ VTGE+
Sbjct: 119 SLSMAYKEGSPIDRTRVSVTDGLRVKLREMMHHFQALREQILKDHREGLKRRYYNVTGEH 178

Query: 180 PDEEVIEKIISDDNGGEEFLKRAIQEHGKGKVLETVVEIQDRHDAAKEIEKSLLELHQVF 239
           P EEV+EK++    GG+E +        +GKV + V+E ++RH+A K+I++SL ELHQ+F
Sbjct: 179 PSEEVLEKMVL--GGGKEKV-------FEGKV-DLVLENKERHEALKDIQRSLTELHQLF 228

Query: 240 LDMAVMVEAQGEQLDDIEHHVLNASHYVKDGAKELKTAKDYQRSSRKW 287
           LDMAV++E QG+++D+IE +V     Y+  G   L  AK  ++ +R W
Sbjct: 229 LDMAVLIETQGDEIDNIEENVARGRTYISGGTNGLYYAKQMKK-NRNW 275


>30086.m000215 syntaxin, arabidopsis thaliana, putative
          Length = 308

 Score =  238 bits (606), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 129/289 (44%), Positives = 193/289 (66%), Gaps = 12/289 (4%)

Query: 1   MNDLMTKSFISYVDLKKEAMKDLEAGPDPDVEMANASNTMDQNLGL--FLEEAEIVKKEM 58
           MNDL+T SF+   D K+    D       D+EM       + + G+  F ++ + V++++
Sbjct: 1   MNDLLTDSFVG--DAKRPPNND-------DIEMGMPMQRSNSDTGMEAFNKQIQEVERQV 51

Query: 59  GSIREILDSLQQSNEESKSLHKSEAVKSLRNIINADIVTVLKKARAIRAQLEEMDRANEA 118
             +  +L  L+++NEESKS+ K+ A+K+++  +  D+  V + ARAI+ ++E +++ N A
Sbjct: 52  DMVSGLLKKLKEANEESKSVTKASAMKAIKKRMEKDVDEVGRIARAIKTKIEAINKENLA 111

Query: 119 NRRLSAFKEGTPIYRTRIAVTNGLRKKLKELMMDFQGLRQKMMAEYKETVGRRYFTVTGE 178
           NR+    ++GT + R R+ VTN L K+ K+LM++FQ LRQK+  EY+E V RR  TVTG 
Sbjct: 112 NRQKPGCEKGTGVDRARMNVTNSLTKRFKDLMIEFQTLRQKIQNEYREVVERRVITVTGT 171

Query: 179 YPDEEVIEKIISDDNGGEEFLKRAIQEHGKGKVLETVVEIQDRHDAAKEIEKSLLELHQV 238
            PDEE I+ +I   N  E+  ++AIQE G+G+VL T+ EIQ+RHDA KEIEK LL+LHQ+
Sbjct: 172 KPDEETIDNLIETGN-SEQIFQKAIQEMGRGQVLNTLEEIQERHDAVKEIEKKLLDLHQI 230

Query: 239 FLDMAVMVEAQGEQLDDIEHHVLNASHYVKDGAKELKTAKDYQRSSRKW 287
           +LDMAV+VEAQGE LD+IE  V NA ++V+ G   L+ AK  QR+SRKW
Sbjct: 231 YLDMAVLVEAQGEILDNIESQVANAVNHVQTGTTALQNAKKLQRNSRKW 279


>29634.m002119 syntaxin, arabidopsis thaliana, putative
          Length = 493

 Score =  236 bits (601), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 128/284 (45%), Positives = 192/284 (67%), Gaps = 13/284 (4%)

Query: 1   MNDLMTKSFISYVDLKKEAMKDLEAGPDPDVEMANASN-TMDQNLGLFLEEAEIVKKEMG 59
           MNDLMTKSF+SYV+LKK+A KDLE   + D+E     N T D NL  F +E + +K EM 
Sbjct: 194 MNDLMTKSFLSYVELKKQARKDLET--EFDIESGCCLNPTDDPNLSQFFQEVDAIKAEMV 251

Query: 60  SIREILDSLQQSNEESKSLHKSEAVKSLRNIINADIVTVLKKARAIRAQLEEMDRANEAN 119
               +L  LQ  ++E+KS H ++ ++ LR+ + A+IV VL+KA+ ++A+LE +D++N+ +
Sbjct: 252 ETTNLLFDLQTLDQETKSTHSNKVLRGLRDRMEANIVAVLRKAKTVKARLESLDQSNQFS 311

Query: 120 RRLS-AFKEGTPIYRTRIAVTNGLRKKLKELMMDFQGLRQKMMAEYKETVGRRYFTVTGE 178
           R++S  +KEG+P+ RTRI VTNGLR +L+E+M +FQ LR+K++ +YK  + RRY+T TGE
Sbjct: 312 RKISELYKEGSPVDRTRILVTNGLRVQLREIMNEFQLLREKILCDYKADLKRRYYTATGE 371

Query: 179 YPDEEVIEKIISDDNGGEEFLKRAIQEHGKGKVLETVVEIQDRHDAAKEIEKSLLELHQV 238
            P EE+IEKIIS     + F          GK     ++ ++RH++  +I++SL +LHQV
Sbjct: 372 EPSEEIIEKIISGSGEVQLF---------AGKEGAVDMKSKERHESVMDIQRSLTKLHQV 422

Query: 239 FLDMAVMVEAQGEQLDDIEHHVLNASHYVKDGAKELKTAKDYQR 282
           FLDMAV+VE QGE+LDDIE +V  A +++  G   L  A   ++
Sbjct: 423 FLDMAVIVETQGEKLDDIEENVAYAGNFISGGTNSLYYANQMKK 466


>30072.m000983 syntaxin, arabidopsis thaliana, putative
          Length = 304

 Score =  214 bits (544), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 187/287 (65%), Gaps = 12/287 (4%)

Query: 1   MNDLMTKSFISYVDLKKEAMKDLEAGPDPDVEMANASNTMDQNLGLFLEEAEIVKKEMGS 60
           MNDL+++SF          +   +     D+EM    N+ D  L  F +  + ++KE   
Sbjct: 1   MNDLLSESF---------EIPRGQGSRGGDIEMG--MNSGDLGLENFFKNVQGIEKENEK 49

Query: 61  IREILDSLQQSNEESKSLHKSEAVKSLRNIINADIVTVLKKARAIRAQLEEMDRANEANR 120
           +  +L  LQ ++EE+K++ ++ A++++R  ++ D+  V K AR +++++EE+DR N +NR
Sbjct: 50  LDRLLKKLQDAHEETKAVTRAPAMRAIRQRMDKDVDEVGKIARTVKSKIEELDRENISNR 109

Query: 121 RLSAFKEGTPIYRTRIAVTNGLRKKLKELMMDFQGLRQKMMAEYKETVGRRYFTVTGEYP 180
           +     +GT + R+R + T  L+KKLK+ M +FQ LR+ +  EY++ V RR FTVTG   
Sbjct: 110 QKPGCGKGTGVDRSRTSTTMALKKKLKDKMAEFQNLRETIHQEYRDVVDRRVFTVTGARA 169

Query: 181 DEEVIEKIISDDNGGEEFLKRAIQEHGKGKVLETVVEIQDRHDAAKEIEKSLLELHQVFL 240
           DEE I+++I   +  E+  ++AIQE G+G++++T+ EIQ+RHDA +++E+ LL+L QVFL
Sbjct: 170 DEETIDRLIETGD-SEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLDLQQVFL 228

Query: 241 DMAVMVEAQGEQLDDIEHHVLNASHYVKDGAKELKTAKDYQRSSRKW 287
           DMAV+V+AQGE LD+IE  V +A  +V+ G   L+ AK  QR+SRKW
Sbjct: 229 DMAVLVDAQGEMLDNIESQVSSAVDHVQSGNTALQKAKKLQRNSRKW 275