Jatropha Genome Database

JcCB0004891.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0004891.30 + phase: 0 /partial
         (161 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006253 carbonic anhydrase, putative                            194   2e-50
29838.m001688 carbonic anhydrase, putative                            156   3e-39
29933.m001383 carbonic anhydrase, putative                            100   2e-22
29631.m001030 carbonic anhydrase, putative                             97   4e-21
30147.m013951 carbonic anhydrase, putative                             76   8e-15
29033.m000049 carbonic anhydrase, putative                             57   3e-09

>29908.m006253 carbonic anhydrase, putative
          Length = 292

 Score =  194 bits (493), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 101/144 (70%), Positives = 110/144 (76%), Gaps = 6/144 (4%)

Query: 1   EKLAKVNDVRLGFPSSHKENPILRVDASISSLGLVQEDRSVQVQNVPKSGGRQNSFDEMK 60
           EK+AKVN  R G  SS KENP++R+DASISSLGLVQE  S   QNV K+ G   +   + 
Sbjct: 27  EKIAKVNGTRKGLLSSDKENPVVRLDASISSLGLVQELTSSNTQNVSKTDGFLLALSILS 86

Query: 61  QRFLNFKQYKYLKEAEHFKNLAELQSPKFMVIACVDSRVCPSNILGFQPGEAFTVRNVAN 120
              LN       KEAE+FKNLAELQSPKFMVIACVDSRVCPSN+LGFQPGEAF VRNVAN
Sbjct: 87  DMLLN------RKEAENFKNLAELQSPKFMVIACVDSRVCPSNVLGFQPGEAFMVRNVAN 140

Query: 121 IVPPLENGPTETNAALEFAVNTLE 144
           IVP LEN PTET AALEFAVNTLE
Sbjct: 141 IVPALENRPTETTAALEFAVNTLE 164


>29838.m001688 carbonic anhydrase, putative
          Length = 313

 Score =  156 bits (395), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 80/145 (55%), Positives = 106/145 (73%), Gaps = 3/145 (2%)

Query: 1   EKLAKVNDVRLGFPS-SHKENPILRVDASISSLGLVQEDRSVQVQNVPKSGGRQNSFDEM 59
           EKL      RL   + S+K    L++ AS     L +E ++ ++++ P +   +  FD+M
Sbjct: 41  EKLGVTEHARLRLCAVSNKSG--LKLKASKEPPALTKELKTDRIESPPVTKDDRALFDKM 98

Query: 60  KQRFLNFKQYKYLKEAEHFKNLAELQSPKFMVIACVDSRVCPSNILGFQPGEAFTVRNVA 119
           KQRF++FKQ  Y+K  EHF+NL++ Q+PKFMVIAC DSRVCPSNILGFQPGEAF VRNVA
Sbjct: 99  KQRFMSFKQNTYMKNLEHFENLSKGQAPKFMVIACADSRVCPSNILGFQPGEAFVVRNVA 158

Query: 120 NIVPPLENGPTETNAALEFAVNTLE 144
           N+VP  E+GP+ETNAALEFAVN+L+
Sbjct: 159 NMVPSYESGPSETNAALEFAVNSLK 183


>29933.m001383 carbonic anhydrase, putative
          Length = 326

 Score =  100 bits (250), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/113 (46%), Positives = 71/113 (62%), Gaps = 1/113 (0%)

Query: 37  EDRSVQVQNVPKSGGRQNSFDEMKQRFLNFKQYKYLKEAEHFKNLAELQSPKFMVIACVD 96
           E  + ++Q         N  + MK+ F++FK+ KY K    +  L++ QSPKFMV AC D
Sbjct: 100 EQITAELQTASSDSKPFNPVERMKEGFIHFKKEKYDKNPGLYSELSKGQSPKFMVFACSD 159

Query: 97  SRVCPSNILGFQPGEAFTVRNVANIVPPLENGP-TETNAALEFAVNTLEKIYL 148
           SRVCPS+IL FQPGEAF VRNVAN+VPP +        AA+E+AV  L+  Y+
Sbjct: 160 SRVCPSHILDFQPGEAFVVRNVANMVPPYDQTKYAGVGAAVEYAVLHLKVEYI 212


>29631.m001030 carbonic anhydrase, putative
          Length = 280

 Score = 96.7 bits (239), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 5/115 (4%)

Query: 30  SSLGLVQEDRSVQVQNVPKSGGRQNSFD---EMKQRFLNFKQYKYLKEAEHFKNLAELQS 86
           + LG V   +  Q+    ++ G ++ FD    +K  F++FK  KY K+   +  LA+ QS
Sbjct: 45  AELGEVAAAKIKQITAELEAAGSKD-FDADERIKTGFIHFKTEKYEKDPTLYGALAKGQS 103

Query: 87  PKFMVIACVDSRVCPSNILGFQPGEAFTVRNVANIVPPLENGP-TETNAALEFAV 140
           PKFMV AC DSRVCPS+IL FQPGEAF VRN+A++VPP +    +   AA+E+AV
Sbjct: 104 PKFMVFACSDSRVCPSHILNFQPGEAFVVRNIASMVPPYDQTKYSGMGAAIEYAV 158


>30147.m013951 carbonic anhydrase, putative
          Length = 246

 Score = 75.9 bits (185), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 18/129 (13%)

Query: 34  LVQEDRSVQVQNVPKSGGRQNSFDEMKQRFLN----------FKQYKYLKEAEHF----- 78
           + ++   +++ +  K+GG++   DE +    N          F   + +K+  H+     
Sbjct: 1   MAEQSFDLKIVDGLKNGGKEEKGDETRIEKFNAESEGLEHEAFDPVQRIKDGFHYFLRHT 60

Query: 79  --KNLAELQSPKFMVIACVDSRVCPSNILGFQPGEAFTVRNVANIVPPLEN-GPTETNAA 135
               +A  Q PKF+V AC DSRV PS +L FQPGEAF VRN+AN+VP       + T AA
Sbjct: 61  YDPTVANGQHPKFLVFACSDSRVSPSVVLNFQPGEAFMVRNIANLVPAFNQLRYSGTGAA 120

Query: 136 LEFAVNTLE 144
           +E+AV  L+
Sbjct: 121 IEYAVKVLQ 129


>29033.m000049 carbonic anhydrase, putative
          Length = 234

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 37/66 (56%)

Query: 78  FKNLAELQSPKFMVIACVDSRVCPSNILGFQPGEAFTVRNVANIVPPLENGPTETNAALE 137
           F++LA+ Q+P  + I C DSRV P  I    PGE F  RN+ NIVP         +A +E
Sbjct: 41  FESLAQGQAPHTLFITCADSRVSPEMITQTHPGELFVCRNIGNIVPAYGEMLGGVSAVVE 100

Query: 138 FAVNTL 143
           +AV  L
Sbjct: 101 YAVLAL 106