Jatropha Genome Database

JcCB0001721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0001721.10 + phase: 1 /partial
         (205 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29864.m001459 polyamine oxidase, putative                             404   e-113
30147.m013966 polyamine oxidase, putative                             172   1e-43
30091.m000234 Flavin-containing amine oxidase domain-containing ...    65   2e-11
29080.m000176 Flavin-containing amine oxidase domain-containing ...    62   2e-10
29745.m000367 amine oxidase, putative                                  59   1e-09
29769.m000451 amine oxidase, putative                                  55   2e-08
29634.m002143 amine oxidase, putative                                  54   4e-08
30170.m014140 lysine-specific histone demethylase, putative            49   1e-06

>29864.m001459 polyamine oxidase, putative
          Length = 493

 Score =  404 bits (1037), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 191/205 (93%), Positives = 198/205 (96%)

Query: 1   PCSPEKEFFIYAHERRGYYTFWQHMENAYPGSNILVVTLTNGESKRVEAQSDEETLKEAM 60
           PC PEKEFFIYAHERRGYYTFWQHMENAYPGSNILVVTLTNGESKRVEAQSDEETL+EAM
Sbjct: 289 PCCPEKEFFIYAHERRGYYTFWQHMENAYPGSNILVVTLTNGESKRVEAQSDEETLEEAM 348

Query: 61  EVLRDMFGPNIPNATDILVPRWWNNRFQRGSYSNYPIISNNQVLHDIKSPVGRIFFTGEH 120
           EVLRDMFGPNIPNATDILVPRWWNNRFQRGSYSNYPIISNNQVLHDI++PVGRI FTGEH
Sbjct: 349 EVLRDMFGPNIPNATDILVPRWWNNRFQRGSYSNYPIISNNQVLHDIRAPVGRILFTGEH 408

Query: 121 TSERFNGYVHGGYLSGIDTSKSLLEVMREEKGRKNESQTFLLEPLLALTGSLTLTQTEAV 180
           TSERFNGYVHGGYLSGIDTSK+LLE M +EK RKNE+QTFLLEPLLALT SLTLTQTEAV
Sbjct: 409 TSERFNGYVHGGYLSGIDTSKTLLEEMIQEKERKNENQTFLLEPLLALTESLTLTQTEAV 468

Query: 181 SSLHKCDIPTQLYLSGKLGIPEAIL 205
           S+LHKCDIPTQLYLSGKL IPEAIL
Sbjct: 469 STLHKCDIPTQLYLSGKLSIPEAIL 493


>30147.m013966 polyamine oxidase, putative
          Length = 483

 Score =  172 bits (436), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 77/153 (50%), Positives = 103/153 (67%)

Query: 1   PCSPEKEFFIYAHERRGYYTFWQHMENAYPGSNILVVTLTNGESKRVEAQSDEETLKEAM 60
           P  P  EFF+Y+H RRGYY  WQH+EN YPGSNIL  T+T  ES+R+E  SDE    E M
Sbjct: 325 PTGPGTEFFLYSHVRRGYYPAWQHLENEYPGSNILFATVTADESRRIEQLSDEAVEAELM 384

Query: 61  EVLRDMFGPNIPNATDILVPRWWNNRFQRGSYSNYPIISNNQVLHDIKSPVGRIFFTGEH 120
           E+L+ +FG +IP    ILVPRW  N+F +GSYSN+P   N +    +  PVG ++FTGEH
Sbjct: 385 EILKKLFGDHIPKPESILVPRWGLNKFYKGSYSNWPANYNQKRKDQLADPVGPVYFTGEH 444

Query: 121 TSERFNGYVHGGYLSGIDTSKSLLEVMREEKGR 153
           TS ++ GY  G YL+GIDT+  L+E ++ +  +
Sbjct: 445 TSNKYIGYATGAYLAGIDTANDLIECIKNKSCK 477


>30091.m000234 Flavin-containing amine oxidase domain-containing
           protein, putative
          Length = 793

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 75/144 (52%), Gaps = 10/144 (6%)

Query: 15  RRGYYTFWQHMENAYPGSNILVVTLTNGESKRVEAQSDEETLKEAMEVLRDMFGPN---I 71
           R  ++ F+ +  ++  G  +L+  +    + + E +S  E+++  +++LR +F P    +
Sbjct: 532 RGEFFLFYSY--SSVSGGPLLIALVAGEAAVKFETKSPVESVRRVLQILRGIFHPKGIAV 589

Query: 72  PNATDILVPRWWNNRFQRGSYSNYPIISNNQVLHDIKSPVG--RIFFTGEHTSERFNGYV 129
           P+    +  RW  + F  GSYS   + S+      +   VG  R+FF GE T++++   +
Sbjct: 590 PDPVQAVCTRWGKDCFTYGSYSYVAVGSSGDDYDILAESVGDGRVFFAGEATNKQYPATM 649

Query: 130 HGGYLSGIDTSKSLLEVMREEKGR 153
           HG +LSG+  + ++L   RE K R
Sbjct: 650 HGAFLSGMREAANIL---REAKKR 670


>29080.m000176 Flavin-containing amine oxidase domain-containing
           protein, putative
          Length = 750

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 5/119 (4%)

Query: 35  LVVTLTNGESKRVEAQSDEETL-KEAMEVLRDMFGP---NIPNATDILVPRWWNNRFQRG 90
           +++ L  GE+ ++   +D  TL    + VLR ++ P   N+P+    +  RW ++    G
Sbjct: 481 VLIALVAGEAAQIFENTDPSTLLHSVLSVLRGIYNPKGINVPDPIQTICTRWGSDPLSYG 540

Query: 91  SYSNYPIISNNQVLHDIKSPV-GRIFFTGEHTSERFNGYVHGGYLSGIDTSKSLLEVMR 148
           SYS+  + S+      +   V GR+FF GE T+ ++   +HG +LSG+  +  +L V R
Sbjct: 541 SYSHVRVQSSGSDYDLLAESVRGRLFFAGEATTRQYPATMHGAFLSGLREASRILRVSR 599


>29745.m000367 amine oxidase, putative
          Length = 961

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 6/112 (5%)

Query: 32  SNILVVTLTNGESK-RVEAQSDEETLKEAMEVLRDMFGPN---IPNATDILVPRWWNNRF 87
           S+ L++ L  GE+  + E+    + + + +++L+ ++ P    +P     +  RW ++ F
Sbjct: 544 SDPLLIALVAGEAAHKFESMPPTDAVTQVLQILKGIYEPKGITVPEPIQTVCTRWGSDPF 603

Query: 88  QRGSYSNYPIISNNQVLHDIKSPVG--RIFFTGEHTSERFNGYVHGGYLSGI 137
             GSYSN  + ++      +   VG  R+FF GE T+ R+   +HG +LSG+
Sbjct: 604 TLGSYSNVAVGASGDDYDILAEGVGDGRLFFAGEATTRRYPATMHGAFLSGL 655


>29769.m000451 amine oxidase, putative
          Length = 498

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 9/132 (6%)

Query: 31  GSNILVVTLTNGESKRVEAQSDEETLKEAMEVLRDMFGPNIPNATD---ILVPRWWNNRF 87
           G  +LV       +  +E  SDE      M  L+ MF    P+ATD    LV RW  +  
Sbjct: 352 GHPVLVYMAAGRFAYDLEKLSDESAATFVMLQLKKMF----PHATDPVRYLVTRWGTDPN 407

Query: 88  QRGSYSNYPIISNNQVLHD-IKSPVGRIFFTGEHTSERFNGYVHGGYLSGIDTSKSLLEV 146
             G Y+ Y ++     L+D +++P+G +FF GE  S    G VHG Y SG+  +++    
Sbjct: 408 SLGCYT-YDVVGKPDDLYDRLRAPLGNLFFGGEAVSMDHQGSVHGAYASGLMAAENCQRH 466

Query: 147 MREEKGRKNESQ 158
           + E+ G   + Q
Sbjct: 467 VLEKLGTMEKLQ 478


>29634.m002143 amine oxidase, putative
          Length = 491

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 2/134 (1%)

Query: 4   PEKEFFIYAHERRGYYTFWQHMENAYPGSNILVVTLTNGESKRVEAQSDEETLKEAMEVL 63
           P  EF     E     +++ ++  A  G ++LV       +K +E  SDE     A   L
Sbjct: 321 PNVEFLGVVSETSYGCSYFLNLHKA-TGHSVLVYMPAGQLAKDIEKMSDEAAANFAFMQL 379

Query: 64  RDMFGPNIPNATDILVPRWWNNRFQRGSYSNYPIISNNQVLHDIKSPVGRIFFTGEHTSE 123
           + +  P   +    LV RW ++    GSYS   +   + +   ++ PV  +FF GE TS 
Sbjct: 380 KKIL-PEASDPIQYLVSRWGSDVNSLGSYSYDTVGKPHDLYERLRVPVDNLFFAGEATSA 438

Query: 124 RFNGYVHGGYLSGI 137
            + G VHG + +G+
Sbjct: 439 SYPGSVHGAFSTGL 452


>30170.m014140 lysine-specific histone demethylase, putative
          Length = 1947

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 67/137 (48%), Gaps = 5/137 (3%)

Query: 14   ERRGY-YTFWQHMENAYPGSNILVVTLTNGESKRVEAQSDEETLKEAMEVLRDMFGPNI- 71
            ++RG+ + FW   +    G+ +L+  +    +   ++ S  + +  A+ VLR +FG  + 
Sbjct: 1252 QKRGHCFMFWNVRKTV--GAPVLIALVVGKAAVDGQSMSSSDHVSHALMVLRKLFGEAVV 1309

Query: 72   PNATDILVPRWWNNRFQRGSYSNYPIISNNQVLHDIKSPVGR-IFFTGEHTSERFNGYVH 130
            P+    +V  W  + F  G+YS   I S+ +    +  P+   +FF GE T +     V 
Sbjct: 1310 PDPVASVVTDWGRDPFSYGAYSYVAIGSSGEDYDILGRPIENCVFFAGEATCKEHPDTVG 1369

Query: 131  GGYLSGIDTSKSLLEVM 147
            G  +SG+  +  +++++
Sbjct: 1370 GAMMSGLREAVRIIDIL 1386