Jatropha Genome Database

JcCA0317641.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317641.20 + phase: 0 /pseudo/partial
         (277 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29842.m003508 phosphatidate cytidylyltransferase, putative            486   e-138
29640.m000412 phosphatidate cytidylyltransferase, putative            175   3e-44
30174.m008826 Phosphatidate cytidylyltransferase, putative             47   8e-06

>29842.m003508 phosphatidate cytidylyltransferase, putative
          Length = 423

 Score =  486 bits (1252), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 235/267 (88%), Positives = 254/267 (95%), Gaps = 1/267 (0%)

Query: 1   MQRDNSTSAPSTP-RLRHRRRSNEVIPEASKENGGHLLLHDRNKYKSMWIRAYSTIWMIG 59
           MQ+D++++ PST  RLRHR+RSNEV+PEA+KENGGHLL+ D+NKYKSMWIR  ST+WMIG
Sbjct: 1   MQKDHNSTVPSTSSRLRHRKRSNEVVPEAAKENGGHLLVDDQNKYKSMWIRTCSTVWMIG 60

Query: 60  GFAFIVYMGHLYITAMVVVIQIFMAKELFNLLRKAHEDRHLPGFRLLNWHFFFTAMLFVY 119
            FA IVYMGHLYITAMVVVIQI+MAKELFNLLRKAHEDRHLPGFRLLNWHFFFTAMLFVY
Sbjct: 61  SFALIVYMGHLYITAMVVVIQIYMAKELFNLLRKAHEDRHLPGFRLLNWHFFFTAMLFVY 120

Query: 120 GRILSQRLVNTVTSDKFLYQLVSSLIKYHMAICYFLYIAGFMWFILTLKKKMYKYQFGQY 179
           GRILSQRLVNTVTSDKFL+QLV+SLIKYHMA+CYFLYIAGFMWFILTLKKKMYKYQFGQY
Sbjct: 121 GRILSQRLVNTVTSDKFLFQLVNSLIKYHMAMCYFLYIAGFMWFILTLKKKMYKYQFGQY 180

Query: 180 AWTHMILIVVFTQSSFTVANIFEGIFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSPK 239
           AWTHMILIVVFTQSSFTVANIFEGIFWFLLPA+LIVINDIFAYI GFFFG+TPLIKLSPK
Sbjct: 181 AWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIFAYICGFFFGRTPLIKLSPK 240

Query: 240 KTWEGFIGASVTTMISAFVLCVLCRKF 266
           KTWEGFIGASVTTMISAFVL  +  +F
Sbjct: 241 KTWEGFIGASVTTMISAFVLANMMGRF 267


>29640.m000412 phosphatidate cytidylyltransferase, putative
          Length = 380

 Score =  175 bits (443), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/138 (72%), Positives = 112/138 (81%), Gaps = 3/138 (2%)

Query: 124 SQRLVNTVTSDKFLY-QLVSSLIKYHMAICYFLYIAGFMWFILTLKKKMYKYQFGQYAWT 182
           S  L+N     K ++ +  SSL  + + + +    +GFMWFILTLKKKMYKYQF QYAWT
Sbjct: 37  SHLLINDQDKYKSMWIRAYSSL--WMLGMGFIFDFSGFMWFILTLKKKMYKYQFSQYAWT 94

Query: 183 HMILIVVFTQSSFTVANIFEGIFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSPKKTW 242
           HMILIVVFTQS+FTVANIFEGIFWFLLPA LIVIND+ AY FGFFFGKTPLIKLSPKKTW
Sbjct: 95  HMILIVVFTQSAFTVANIFEGIFWFLLPALLIVINDVAAYFFGFFFGKTPLIKLSPKKTW 154

Query: 243 EGFIGASVTTMISAFVLC 260
           EGFIGASV T+ISAFVL 
Sbjct: 155 EGFIGASVATIISAFVLA 172



 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 41/63 (65%), Positives = 56/63 (88%), Gaps = 1/63 (1%)

Query: 2  QRDNSTSAPSTPRLRHRRRSNEVIPEASKENGGHLLLHDRNKYKSMWIRAYSTIWMIG-G 60
          +++++TSAPSTPR+RHRRRSNE+  E S+ NG HLL++D++KYKSMWIRAYS++WM+G G
Sbjct: 5  KQEHNTSAPSTPRIRHRRRSNELPHEISRLNGSHLLINDQDKYKSMWIRAYSSLWMLGMG 64

Query: 61 FAF 63
          F F
Sbjct: 65 FIF 67


>30174.m008826 Phosphatidate cytidylyltransferase, putative
          Length = 404

 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)

Query: 203 GIFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSPKKTWEGFI----GASVTTMISAFV 258
           G+   L+  + I+  D +A++ G  FG+TPL  +SPKKTWEG I    G   T++I + +
Sbjct: 268 GLVATLISMSSIIAADTYAFMGGKAFGRTPLTSISPKKTWEGTIVGLGGCIATSVILSRI 327

Query: 259 LC 260
            C
Sbjct: 328 FC 329