Jatropha Genome Database

JcCA0317631.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317631.30 + phase: 0 /partial
         (59 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29904.m002980 Chalcone synthase, putative                             108   4e-25
29648.m001959 Chalcone synthase, putative                              61   1e-10

>29904.m002980 Chalcone synthase, putative
          Length = 390

 Score =  108 bits (271), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 48/59 (81%), Positives = 55/59 (93%)

Query: 1  MVTVEEVRKAQRAQGPATVLAIGTATPSNCVDQSTYPDYYFRITNSEHKVELKEKFKRM 59
          MV+V++VR+ QRA+GPATVLAIGT TP+N VDQSTYPDYYFR+TNSEHK ELKEKFKRM
Sbjct: 1  MVSVQDVRRTQRAEGPATVLAIGTVTPTNSVDQSTYPDYYFRVTNSEHKTELKEKFKRM 59


>29648.m001959 Chalcone synthase, putative
          Length = 369

 Score = 60.8 bits (146), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/43 (58%), Positives = 33/43 (76%)

Query: 17 ATVLAIGTATPSNCVDQSTYPDYYFRITNSEHKVELKEKFKRM 59
          A +LAIGTA P N + Q+ YPD+YF+I+NSEH  ELK KF+ +
Sbjct: 5  AKILAIGTANPPNYIFQADYPDFYFKISNSEHMTELKNKFRNI 47