Jatropha Genome Database

JcCA0317621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317621.10 + phase: 0 
         (289 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013929 conserved hypothetical protein                          254   2e-68
29889.m003370 conserved hypothetical protein                          146   1e-35
30174.m009106 conserved hypothetical protein                          120   9e-28
27561.m000301 conserved hypothetical protein                          110   6e-25
29736.m002068 conserved hypothetical protein                          102   2e-22
29842.m003554 conserved hypothetical protein                           90   1e-18
29988.m000123 hypothetical protein                                     50   1e-06

>30147.m013929 conserved hypothetical protein
          Length = 221

 Score =  254 bits (650), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 123/153 (80%), Positives = 135/153 (88%), Gaps = 1/153 (0%)

Query: 127 CSAKSPLFQGFPGKHLPCRNVSGMGCEEYYGCPAWSVVGRRHAGSMFGSGPPECCAVAFE 186
           CSA+S   + FPG+ L CRNVSGMGCEEYYGCPAWS+VG R  GS FGSGPPECCAVAFE
Sbjct: 46  CSAQSRSPR-FPGEALACRNVSGMGCEEYYGCPAWSLVGHRRVGSTFGSGPPECCAVAFE 104

Query: 187 AIKAINLSKLECEGYSSAYSLAPLRVDGPSEWSFGIRVKYSVQENEEFCRACEATGGTCG 246
           AIKAINLSKLECEGYSSAYSLAPLRVDGP EWS+GIRVKYSVQ NEEFCRACEATGGTCG
Sbjct: 105 AIKAINLSKLECEGYSSAYSLAPLRVDGPGEWSYGIRVKYSVQGNEEFCRACEATGGTCG 164

Query: 247 YGSDGIRQMCMCADFNSTSNCDSGTLKQTYTVT 279
           YG+DG++Q+CMC +FNSTSNCDS +  QT + T
Sbjct: 165 YGTDGVKQLCMCGNFNSTSNCDSVSASQTRSRT 197


>29889.m003370 conserved hypothetical protein
          Length = 294

 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 138/252 (54%), Gaps = 17/252 (6%)

Query: 23  LNPCRSYCGNITIDYPFSLQYGCGHPGFRDLLFCINDVLMFHISSGSYRVLEIDYAYQSL 82
           L  CR+ CG + I YPF +  GCG P FR +  C ND L F   SGSY+V +IDY  +++
Sbjct: 30  LTSCRTSCGRVDIRYPFGVDDGCGAPQFRGMFNCSND-LFFITPSGSYKVQQIDYEKKTI 88

Query: 83  TLHEPHLSNCDTIVLGSKGNGFSVEPWRSPYFNPTADNVFMLIGCSAKSPLFQGFPGKHL 142
            +++P +S C  +      + F +   +S    PT D VF L+ CS  SP+   +  K+L
Sbjct: 89  EVYDPAMSTCSIL---QPHHDFVMSDIQSSMIPPTPDTVFALLNCSIDSPVLNHY--KNL 143

Query: 143 PCRNVSGMGCEEYYG-CPAWSVVGRRHAGSMFGSGPPECCAVAFEAIKAINLSKLECEGY 201
            C N SG  C+E YG C A+ V        +  +  P CC   ++ ++ ++++ L+C  Y
Sbjct: 144 -CFNFSGHSCDELYGSCNAFRVF------HLLTNSSPPCCFTGYDTVRYMSMNILDCTHY 196

Query: 202 SSAYSLAPLRVDGPSEWSFGIRVKYSVQENEEFCRACEATGGTCGYGSDGIRQMCMC-AD 260
           ++  +   L+  GP +W +GI++ YS+ +    C  C  +GGTCG+ ++    +C+C + 
Sbjct: 197 TTVVNTDNLKGIGPLDWVYGIKLSYSMPDTG--CERCSQSGGTCGFDTETGGMLCLCSSS 254

Query: 261 FNSTSNCDSGTL 272
            N+T  C +G++
Sbjct: 255 TNATRECAAGSI 266


>30174.m009106 conserved hypothetical protein
          Length = 296

 Score =  120 bits (300), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 109/230 (47%), Gaps = 18/230 (7%)

Query: 26  CRSYCGNITIDYPFSLQYGCGHPGFRDLLFCINDVLMFHISSGSYRVLEIDYAYQSLTLH 85
           C   CG I + +PF   +GCGHP F   + C +  L F   +G Y +  IDY   +L + 
Sbjct: 36  CYDTCGTIPVKFPFGTGFGCGHPEFARYVRCNSGALEFSTGTGIYTISSIDYPSNTLIVE 95

Query: 86  EPHLSNCDTIVLGSKGNGFSVEPWRSPYFNPTADNVFMLIGCSAKSPLFQGFPGKHLPCR 145
           +P +S C ++        FS++  R+  F  T DN+F+L+GCS  SP+F   P + L  R
Sbjct: 96  DPLMSTCSSM---QNSGSFSLD--RASPFTLTGDNIFVLLGCSTTSPVFD--PNEDLCDR 148

Query: 146 NVSGMGCEEYYGCPAWSVVGRRHAGSMFGSGPPECCAVAFEAIK----AINLSKLECEGY 201
                 C   Y C   S +G         + P   C V    I+     ++L KL+C  Y
Sbjct: 149 GSVTRVCRGLYSCKGVSGIGLPQ------NAPIATCCVYESPIQLAGYTLDLPKLQCSSY 202

Query: 202 SSAYSLAPLRVDGPSEWSFGIRVKYSVQENEEFCRACEATGGTCGYGSDG 251
           +S YS      D P +W FGI ++Y+       C+ CE +GG CG+   G
Sbjct: 203 TSVYSFGGNEGD-PMKWKFGISLQYNGSYYSNICKDCETSGGLCGFAGMG 251


>27561.m000301 conserved hypothetical protein
          Length = 302

 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 124/260 (47%), Gaps = 33/260 (12%)

Query: 25  PCRSYCGNITIDYPFSLQYGCGHPGFRDLLFCIN--DVLMFHISSGSYRVLEIDYAYQSL 82
           PCR+ CG++ + YPF   YGCG P F   + C +  D L+    +GSY +  I Y   ++
Sbjct: 28  PCRTTCGSLQVKYPFGTAYGCGSPRFYPYITCASGGDQLLLTTHTGSYPITSISYTATTI 87

Query: 83  TLHEPHLSNCDTIVLGSKGNGFSVEPWRSPYFNPTADNVFMLIGC--SAKSPLFQGFPGK 140
           T+  P +S C T +  S   G     W SP+      + F+L+ C     S   +G P  
Sbjct: 88  TISPPSMSTC-TSMHQSPNLGLD---WASPF--QLGPSTFLLLSCPPPTSSLTMKGSPV- 140

Query: 141 HLPCRNVSGMGCEEYYGCPAWSVVGRRHAGSMFGSGPP--ECCAVA---FEAIKAINLSK 195
              C   S   C   Y CP  SV+G      +F   PP   CC  A   F     ++L  
Sbjct: 141 ---CDASSSYLCASIYTCP--SVIGLGLP--LF---PPTNTCCVYAPANFNGKSELDLHM 190

Query: 196 LECEGYSSAYSLAPLRVDGPSEWSFGIRVKYSVQENEEF-----CRACEATGGTCGYGSD 250
           L+C GY+S  SL     D P+ W +G+ + Y     ++F     C  CE++GG CGY + 
Sbjct: 191 LKCSGYASIISLQDYPTD-PTRWEYGVVLNYRSGAFDDFYMDTKCNTCESSGGVCGYAAP 249

Query: 251 GIRQMCMC-ADFNSTSNCDS 269
           G   +C+C +  N+T++C++
Sbjct: 250 GYSFLCLCNSGINTTTDCNA 269


>29736.m002068 conserved hypothetical protein
          Length = 304

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 113/250 (45%), Gaps = 17/250 (6%)

Query: 26  CRSYCGNITIDYPFSLQYGCGHPGFRDLLFCINDVLMFHISSGSYRVLEIDYAYQSLTLH 85
           C++ CG I + YPF    GCG P  +  + C  D L     +G Y V  IDY  Q + + 
Sbjct: 30  CKNSCGKIPVKYPFGTGLGCGDPRLQKYVTCNQDKLTLTTHTGCYPVTNIDYTNQVIYIS 89

Query: 86  EPHLSNCDTIVLGSKGNGFSVEPWRSPYFNPTADNVFMLIGCS-AKSPLFQGFPGKHLPC 144
           +P +S C      SKG G     W +P F+   D VF L+ CS + SP+++         
Sbjct: 90  DPSMSTC-ACTQPSKGFGLD---WDAP-FSFCDDTVFTLLDCSTSSSPIYRTNTNSD--- 141

Query: 145 RNVSGMGCEEYYGCPAWSVVGRRHAGSMFGSGPPECCA---VAFEAIKAINLSKLECEGY 201
            N + +   +  G P  S +    A SM       CC    V       ++L KL+C  Y
Sbjct: 142 SNATIVPQCDRTGAPICSFLYSCQAISMLNLPISTCCVYTPVDLGPSFEMDLEKLQCRSY 201

Query: 202 SSAYSLAPLRVDGPSEWSFGIRVKYSVQENEEF---CRACEATGGTCGYGSDGIRQMCMC 258
           S  YS +  + + P  W +GI +KY      ++   C  CE + G CGYG      +C C
Sbjct: 202 SGFYSFSGQKAN-PENWKYGIALKYKFNVYNDYPTSCANCEKSDGVCGYGGAFNSFVCNC 260

Query: 259 AD-FNSTSNC 267
            +  N+TS+C
Sbjct: 261 PNGLNTTSDC 270


>29842.m003554 conserved hypothetical protein
          Length = 340

 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 121/269 (44%), Gaps = 33/269 (12%)

Query: 21  AHLNPCRSYCGNITIDYPFSLQYGCGHPGFRDLLFCIND-VLMFHISSGSYRVLEIDYAY 79
           A  + CR++CG I I+YPF +  GCG P +R +L C +   L F   SG Y+V  I Y+ 
Sbjct: 40  AQASHCRTFCGTIPINYPFGIDDGCGSPYYRHMLVCSDSGNLEFRTPSGRYQVHSISYSD 99

Query: 80  QSLTLHEPHLSNCDTIVLGSKGNGFSVEPWRSPYFNPTADNVFMLIGCSAKSPLFQGFPG 139
             + + +P + NC           FS++   S +F  ++ N ++   CS ++ + +  P 
Sbjct: 100 PHIIVADPFMWNCQDGSHFRATRPFSLD--TSTHFTLSSQNDYLFFNCSEENVIVEPKP- 156

Query: 140 KHLPCRNVSGMGCEEY-----YGCPAWSVVGRRHAGSMFGSGPPECCAVAFEAIKAINLS 194
                     + CE +       C + S + R   G     G   CC+   +A +++ L 
Sbjct: 157 ----------IFCERFPDQCDSTCDSASYLCRHLPGCATALGGSSCCSYYPKATESLRLM 206

Query: 195 KLECEGYSSAYSLAPLRVDGPSE-----WSFGIRVKYSVQENEEFCRACEAT---GGTCG 246
              C  Y+S Y     R +G +        +GIR+ + +      C  C+     GGTCG
Sbjct: 207 LKYCASYTSIY----WRNNGANSPYDQVPEYGIRIDFDIPVTTH-CLECQDMTKGGGTCG 261

Query: 247 YGSDGIRQMCMCADFNSTSNC-DSGTLKQ 274
           + +     +C+C + N T+ C D GT +Q
Sbjct: 262 FDTQSQNFLCLCNERNVTTYCKDHGTSRQ 290


>29988.m000123 hypothetical protein
          Length = 277

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/268 (21%), Positives = 98/268 (36%), Gaps = 49/268 (18%)

Query: 28  SYCGNITIDYPFSLQYGCGHPGF-RDLLFCINDVLMFHISSGSYRVLEIDYAYQSLTLHE 86
           S+CG I I  PF            + ++ C +  L F  S G + V  IDYA +++T+ +
Sbjct: 32  SFCGKIPIQSPFLSSNSTVSSSLLKHMILCSSQKLFFRTSLGLFPVSSIDYATKTITISQ 91

Query: 87  PHLSNCDTIVLGS-KGNGFSVEPWRSPYFNPTADNVFMLIGCSAKS-PLFQGFPGKHLPC 144
           P   +    V  S    GF   P           N  +L  CS K+ P+   F       
Sbjct: 92  PSCPSSQQFVSPSLLSAGFPTSPML---------NSLILFNCSNKNYPITSSFS------ 136

Query: 145 RNVSGMGCEEYYGCPAWSVVGRRHAGSMFGSGPPECCAVAFEAIKAINLSKLE------- 197
                  C+ +  C + S              P +   + +  +   NL KL+       
Sbjct: 137 ------NCKNFKACSSSS------------DTPHQELKIPYSCLLVNNLDKLDKSFHPKD 178

Query: 198 --CEGYSSAYSLAPLRVDGPSEWSFGIRVKYSVQEN-EEFCRACEATGGTCGYGSDGIRQ 254
             C  YS  Y  +    D    +  G R+ + + ++    C  CE   G CG    G++ 
Sbjct: 179 LNCSHYSRIYRSSLNDDDNSIGYELGTRISFDIPDHVPNICDECEKPNGNCGV---GLKC 235

Query: 255 MCMCADFNSTSNCDSGTLKQTYTVTILN 282
           +C   +  +     +G++K +  + I +
Sbjct: 236 ICHPKECKNKVISTAGSIKPSANIVIFS 263