Jatropha Genome Database

JcCA0317481.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317481.40 - phase: 2 /partial
         (151 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29640.m000405 EH-domain-containing protein, putative                  286   2e-78
29842.m003519 EH-domain-containing protein, putative                  266   3e-72

>29640.m000405 EH-domain-containing protein, putative
          Length = 550

 Score =  286 bits (733), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 136/150 (90%), Positives = 143/150 (95%)

Query: 1   SFNDKPVNEAAVGPIGKELFEKEQEDLLSDLKDIPKKACDRRINEFVKRARAAKIHAYII 60
           SFNDKP+NE A+GPIGKELFEKEQEDLLSDLKDIPKKACDRRINEFVKRARAAKIHAYII
Sbjct: 400 SFNDKPINEDAIGPIGKELFEKEQEDLLSDLKDIPKKACDRRINEFVKRARAAKIHAYII 459

Query: 61  SHLKKEMPAMMGKAKTQQRLIDSLADEFGKVQREFHLPPGDFPNVEHFREVLSGYNIDKF 120
           SHLKK MP M+GKAK QQRLID+L +EFGKVQ EFHLPPGDFPNVE FREVLSGY+IDKF
Sbjct: 460 SHLKKAMPTMVGKAKAQQRLIDNLGEEFGKVQSEFHLPPGDFPNVEQFREVLSGYSIDKF 519

Query: 121 EKLKPKMIQAVDDMLGYDIPDLLKNFRNPY 150
           EKLKPKMIQAVDDMLGYDIP+LLKNFRNPY
Sbjct: 520 EKLKPKMIQAVDDMLGYDIPELLKNFRNPY 549


>29842.m003519 EH-domain-containing protein, putative
          Length = 545

 Score =  266 bits (680), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 125/150 (83%), Positives = 139/150 (92%)

Query: 1   SFNDKPVNEAAVGPIGKELFEKEQEDLLSDLKDIPKKACDRRINEFVKRARAAKIHAYII 60
           SFNDKP++E  V P+ +ELFEKEQ+DLL DL DIPKKACDRRINEFVKRARAAKIHAYII
Sbjct: 395 SFNDKPIDEENVNPMFRELFEKEQDDLLMDLVDIPKKACDRRINEFVKRARAAKIHAYII 454

Query: 61  SHLKKEMPAMMGKAKTQQRLIDSLADEFGKVQREFHLPPGDFPNVEHFREVLSGYNIDKF 120
           SHL+KEMP ++GKAKTQQRLID+L DEFGKVQRE+HLP GDFPNVEHF+EVL+GY+IDKF
Sbjct: 455 SHLRKEMPTIVGKAKTQQRLIDNLEDEFGKVQREYHLPAGDFPNVEHFKEVLNGYSIDKF 514

Query: 121 EKLKPKMIQAVDDMLGYDIPDLLKNFRNPY 150
           EKLKPKMIQAVDDMLGY+IP LL NFRNPY
Sbjct: 515 EKLKPKMIQAVDDMLGYEIPQLLNNFRNPY 544