Jatropha Genome Database

JcCA0317171.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317171.20 + phase: 0 
         (756 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006479 Magnesium-chelatase subunit chlD, chloroplast prec...  1157   0.0  
29900.m001577 Magnesium-chelatase subunit chlI, chloroplast prec...   204   1e-52

>30169.m006479 Magnesium-chelatase subunit chlD, chloroplast
           precursor, putative
          Length = 760

 Score = 1157 bits (2992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 602/765 (78%), Positives = 630/765 (82%), Gaps = 15/765 (1%)

Query: 1   MAFSPT-----TCSFSVTCTPYQLQSSIL-LPSVKWYSLLPAFYSFKLAKR-PHT-RRFS 52
           MAFSPT     T  + V  +  QLQSS+L +P  K +S     +SFK  KR P++ RRF 
Sbjct: 1   MAFSPTAGTKFTLPYGVPTSLSQLQSSVLSIPCFKSHS-----HSFKSPKRRPYSYRRFG 55

Query: 53  VL-ASSANATLEPGNGAVVAPSEKLELSSYGRQFFPLAAVVGQDAIKTALLLGAIDREIG 111
           V+ +SSA  TL+  NGAVV+PS+  + SSYGRQ+FPLAAVVGQDAIKTALLLGAIDREIG
Sbjct: 56  VIVSSSATPTLQSTNGAVVSPSQNPDSSSYGRQYFPLAAVVGQDAIKTALLLGAIDREIG 115

Query: 112 GIAISGRRGTAKTVMARGLHAILPPIDVVVGSVANADPSYPEEWEDGLAERA-YDSDGNV 170
           GIAISG+RGTAKTVMARGLHAILPPIDVVVGS+ANADPS PEEWEDGLAER  YDSDGN+
Sbjct: 116 GIAISGKRGTAKTVMARGLHAILPPIDVVVGSIANADPSCPEEWEDGLAERVEYDSDGNI 175

Query: 171 KTQVVRSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLD 230
           KT+VVRSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLD
Sbjct: 176 KTEVVRSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLD 235

Query: 231 EGISNLLLNVLTEGVNIVEREGISFKHPCKPLLIATYNPEEGAVREHLLDRIAINLSADL 290
           EGISNLLLNVLTEGVNIVEREGISF+HPCKPLLIATYNPEEGAVREHLLDRIAINLSADL
Sbjct: 236 EGISNLLLNVLTEGVNIVEREGISFRHPCKPLLIATYNPEEGAVREHLLDRIAINLSADL 295

Query: 291 PMNFEDRVAAVGIATQFQERSNEVFQMVVEETEFAKTQVILAREYLKDVTIGREQLKYLV 350
           PMNFEDRVAAVGIATQFQE   EVF+MV EETEFAKTQ+ILAREYLKDVT+ R+QLKYLV
Sbjct: 296 PMNFEDRVAAVGIATQFQEHCTEVFKMVEEETEFAKTQIILAREYLKDVTVSRDQLKYLV 355

Query: 351 MEALRGGCQGHRAELYAARVAKCLAALEGREKVNVDDLKKAVELVILPRSIVSXXXXXXX 410
           +EALRGGCQGHRAELYAARVAKCLAALEGREKVNVDDLKKAVELVILPRSI++       
Sbjct: 356 LEALRGGCQGHRAELYAARVAKCLAALEGREKVNVDDLKKAVELVILPRSIINESPPEQQ 415

Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPEEFIFDAEGGLVDEKLLFFX 470
                                                 IPEEFIFDAEGG VDEKLLFF 
Sbjct: 416 NQQPPPPPPPQNQDPGDEQNEEEDQEDNDEDNEQQQDQIPEEFIFDAEGGFVDEKLLFFA 475

Query: 471 XXXXXXXXXXXXXXNVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKLRREKDTQ 530
                         NVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKLRREKDTQ
Sbjct: 476 QQAQRRRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKLRREKDTQ 535

Query: 531 KSRKVFVEXXXXXXXXXXXXXXXLVIFVVDASGSMALNRMQNAKGAALKLLAESYTSRDQ 590
           KSRKVFVE               LVIFVVDASGSMALNRMQNAKGAA+KLLAESYTSRDQ
Sbjct: 536 KSRKVFVEKTDMRAKRMARKAGALVIFVVDASGSMALNRMQNAKGAAIKLLAESYTSRDQ 595

Query: 591 VAIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHGLTTAVRVGLNAEKSGDVG 650
           VAIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHGLTTAVRVGLNAEKSGDVG
Sbjct: 596 VAIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHGLTTAVRVGLNAEKSGDVG 655

Query: 651 RIMIVAITDGRANISLKXXXXXXXXXXXXXXXXXQELKDEILEVAGKIYKAGMSLLVIDT 710
           RIMIVAITDGRANISLK                 QELKDEILEVAGKIYKAGMSLLVIDT
Sbjct: 656 RIMIVAITDGRANISLKRSTDPDVAASDAPRPSAQELKDEILEVAGKIYKAGMSLLVIDT 715

Query: 711 ENKFVSTGFAKEIARVAQGKYYYLPNASDAVISATTKEALSALKS 755
           ENKFVSTGFAKEIARVAQGKYYYLPNASDAVISATTKEALSALKS
Sbjct: 716 ENKFVSTGFAKEIARVAQGKYYYLPNASDAVISATTKEALSALKS 760


>29900.m001577 Magnesium-chelatase subunit chlI, chloroplast
           precursor, putative
          Length = 419

 Score =  204 bits (520), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/364 (35%), Positives = 190/364 (52%), Gaps = 8/364 (2%)

Query: 35  PAFYSFKLAK-----RPHTRRFSVLASSANATLEPGNGAVVAPSEKLELSSYGRQFFPLA 89
           P+F S  L       R + R   + +    +        V   ++ +      R  FP A
Sbjct: 27  PSFPSLSLTPGLTIGRKYCRGIGIQSKKGRSQFHLTVTNVATDAQNVAAKESQRPVFPFA 86

Query: 90  AVVGQDAIKTALLLGAIDREIGGIAISGRRGTAKTVMARGLHAILPPIDVVVGSVANADP 149
           A+VGQD +K  LLL  ID +IGG+ I G RGT K+   R L  +LP I VV G   N+DP
Sbjct: 87  AIVGQDEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEISVVFGDPYNSDP 146

Query: 150 SYPEEWEDGLAERAYDSDGN-VKTQVVRSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVF 208
             PE    G+  R     G  +   + +   V +PLG TEDR+ G++D+E+++  G   F
Sbjct: 147 EDPESM--GVEVRESIMKGEELSVVLTKINMVDLPLGATEDRVCGTIDIEKALTEGVKAF 204

Query: 209 QPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLTEGVNIVEREGISFKHPCKPLLIATYN 268
           +PGLLA+A+RG+LYVDE+NLLD+ + ++LL+    G N VEREGIS  HP + +LI + N
Sbjct: 205 EPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGN 264

Query: 269 PEEGAVREHLLDRIAINLSADLPMNFEDRVAAVGIATQFQERSNEVFQMVVEETEFAKTQ 328
           PEEG +R  LLDR  ++       + E RV  V   ++F +   E       E E  + Q
Sbjct: 265 PEEGELRPQLLDRFGMHAQVGTVKDAELRVKIVEERSRFDKNPKEFRDSYKAEQEKLQQQ 324

Query: 329 VILAREYLKDVTIGREQLKYLVMEALRGGCQGHRAELYAARVAKCLAALEGREKVNVDDL 388
           +  AR  L  V I R+    +          G R ++   R AK LAAL+GR+KV+ +D+
Sbjct: 325 ISSARTALSQVQIDRDLKVKISKVCAELNVDGLRGDIVTNRAAKALAALKGRDKVSAEDI 384

Query: 389 KKAV 392
              +
Sbjct: 385 ATVI 388