Jatropha Genome Database

JcCA0317081.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317081.30 - phase: 0 
         (335 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29703.m001481 5-methyltetrahydrofolate:homocysteine methyltransf...   606   e-174
29844.m003244 5-methyltetrahydrofolate:homocysteine methyltransf...   509   e-145
27524.m000295 5-methyltetrahydrofolate:homocysteine methyltransf...   382   e-106

>29703.m001481 5-methyltetrahydrofolate:homocysteine
           methyltransferase, putative
          Length = 343

 Score =  606 bits (1562), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 291/334 (87%), Positives = 314/334 (94%), Gaps = 1/334 (0%)

Query: 1   MRHS-GAEQSSLISDFLRQSGGVAVIDGGLATELEQHGADLNDPLWSAKCLLTSPHLIRT 59
           MRHS GA  SSL++DFL+QSGGVAVIDGGLATELE+HGADLNDPLWSAKCLLTSPHLIR 
Sbjct: 1   MRHSSGANPSSLMTDFLKQSGGVAVIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRM 60

Query: 60  VHLDYLEAGADVIITASYQATIQGFEAKGFSSQEGEALLKKSVEIACEARDIYYERCQTG 119
           VHLDYLEAGAD+IITASYQATIQGFEAKGFSS E EALLKKSVEIACEAR++Y+++C  G
Sbjct: 61  VHLDYLEAGADIIITASYQATIQGFEAKGFSSAESEALLKKSVEIACEAREVYHDKCLAG 120

Query: 120 ACDGNNDNRVLKQRPILVAASVGSYGAYLADGSEYSGIYGDDITLETLKDFHRRRVQVLA 179
           ACD NND RVLK+RPILVAASVGSYGAYLADGSEYSG YG+ +TL TLKDFHRRRVQVLA
Sbjct: 121 ACDDNNDGRVLKKRPILVAASVGSYGAYLADGSEYSGDYGEAVTLGTLKDFHRRRVQVLA 180

Query: 180 DSGADLIAFETVPNKVEAQAYADLLEEENIKIPAWFSFNSKDGINVVSGDSLLECASIAE 239
           ++GADLIAFETVPN+VEAQAYA+LLEEE+IK+PAWFSFNSKDGINVVSGDSLLECASIAE
Sbjct: 181 EAGADLIAFETVPNRVEAQAYAELLEEEDIKVPAWFSFNSKDGINVVSGDSLLECASIAE 240

Query: 240 SCSKVAAVGINCTPPRFIHGLILCIKKVTSKPILIYPNSGESYDADLKEWVQNTGISDED 299
           SC KV AVGINCTPP FIHGLIL IKKVTSKPILIYPNSGESYDAD KEWVQNTG++DED
Sbjct: 241 SCRKVIAVGINCTPPSFIHGLILSIKKVTSKPILIYPNSGESYDADRKEWVQNTGVTDED 300

Query: 300 FVSYVNKWCEIGASLIGGCCRTTPKTIRAIYWTL 333
           FVSYVNKWCE+GASL+GGCCRTTP TIRAIY TL
Sbjct: 301 FVSYVNKWCEVGASLVGGCCRTTPNTIRAIYRTL 334


>29844.m003244 5-methyltetrahydrofolate:homocysteine
           methyltransferase, putative
          Length = 348

 Score =  509 bits (1311), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 237/320 (74%), Positives = 283/320 (88%), Gaps = 1/320 (0%)

Query: 10  SLISDFLRQSGGVAVIDGGLATELEQHGADLNDPLWSAKCLLTSPHLIRTVHLDYLEAGA 69
           S +SDFL++ GG AVIDGG ATELE+HGADLNDPLWSAKCL++SPHL+R VHLDY++AGA
Sbjct: 11  SFMSDFLQKCGGYAVIDGGFATELERHGADLNDPLWSAKCLISSPHLVRRVHLDYIDAGA 70

Query: 70  DVIITASYQATIQGFEAKGFSSQEGEALLKKSVEIACEARDIYYERCQTGACDGNNDNRV 129
           ++I+TASYQATIQGFEAKG S++E E LL++SVEIACEAR+IYY+ C  G+ D   D + 
Sbjct: 71  NIILTASYQATIQGFEAKGLSTEEAEQLLRRSVEIACEAREIYYDNCTKGSWDLMEDGK- 129

Query: 130 LKQRPILVAASVGSYGAYLADGSEYSGIYGDDITLETLKDFHRRRVQVLADSGADLIAFE 189
           + + P+LVAAS+GSYGAYLADGSEYSG YGD ++++TLKDFHRRR+Q+LA SGADLIAFE
Sbjct: 130 MSRHPVLVAASIGSYGAYLADGSEYSGDYGDAVSIQTLKDFHRRRLQILAKSGADLIAFE 189

Query: 190 TVPNKVEAQAYADLLEEENIKIPAWFSFNSKDGINVVSGDSLLECASIAESCSKVAAVGI 249
           T+PNK+EA+AYA+LLEEE I IPAWFSFNSKDGINVVSGDS+LECASIA+S  +V AVGI
Sbjct: 190 TIPNKLEAKAYAELLEEEGINIPAWFSFNSKDGINVVSGDSILECASIADSSKQVVAVGI 249

Query: 250 NCTPPRFIHGLILCIKKVTSKPILIYPNSGESYDADLKEWVQNTGISDEDFVSYVNKWCE 309
           NCTPPRFIHGLIL +++ TSKPI+IYPNSGE+YDA LK+WV++ G SDEDFVSY+ KW E
Sbjct: 250 NCTPPRFIHGLILSMREATSKPIVIYPNSGETYDAALKQWVKSCGASDEDFVSYIGKWRE 309

Query: 310 IGASLIGGCCRTTPKTIRAI 329
            GASL GGCCRTTP TIRAI
Sbjct: 310 AGASLFGGCCRTTPNTIRAI 329


>27524.m000295 5-methyltetrahydrofolate:homocysteine
           methyltransferase, putative
          Length = 327

 Score =  382 bits (981), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 183/328 (55%), Positives = 238/328 (72%), Gaps = 8/328 (2%)

Query: 7   EQSSLISDFLRQSGGVAVIDGGLATELEQHGADLNDPLWSAKCLLTSPHLIRTVHLDYLE 66
           ++ SL+ D + ++GG AVIDGG AT+LE HGA +NDPLWSA CL+  P LI+ VHL+YLE
Sbjct: 5   KRRSLLEDLIEKAGGCAVIDGGFATQLETHGAAINDPLWSALCLIKDPELIKRVHLEYLE 64

Query: 67  AGADVIITASYQATIQGFEAKGFSSQEGEALLKKSVEIACEARDIYYERCQTGACDGNND 126
           AGAD+++T+SYQAT+ GF +KG + +EGE LLKKSV++A EARD ++        D    
Sbjct: 65  AGADILVTSSYQATLPGFMSKGLTIEEGELLLKKSVKLAIEARDKFW--------DAVKR 116

Query: 127 NRVLKQRPILVAASVGSYGAYLADGSEYSGIYGDDITLETLKDFHRRRVQVLADSGADLI 186
           N + +    LVAAS+GSYGAYLADGSEYSG YG D+ LE LKDFHR R+QVLA++G DL+
Sbjct: 117 NPLHRYNRALVAASIGSYGAYLADGSEYSGYYGPDVNLEKLKDFHRHRLQVLAEAGPDLL 176

Query: 187 AFETVPNKVEAQAYADLLEEENIKIPAWFSFNSKDGINVVSGDSLLECASIAESCSKVAA 246
           AFET+PNK+EA+A  +LLEEENIKIP+W  F+S DG N  SG+S  EC  +    +KV A
Sbjct: 177 AFETIPNKLEAEACVELLEEENIKIPSWICFSSVDGENAPSGESFQECLDVINKSNKVVA 236

Query: 247 VGINCTPPRFIHGLILCIKKVTSKPILIYPNSGESYDADLKEWVQNTGISDEDFVSYVNK 306
            GINC PP FI  LI   KK+T K +++YPNSGE +D   K W+ +   +D+ F  +  +
Sbjct: 237 AGINCAPPHFIESLICKFKKLTQKFVVVYPNSGEIWDGRAKRWLPSACFNDDKFEFFATR 296

Query: 307 WCEIGASLIGGCCRTTPKTIRAIYWTLR 334
           W ++GA+LIGGCCRTTP TIRAI   L+
Sbjct: 297 WHDLGANLIGGCCRTTPSTIRAISKVLK 324