Jatropha Genome Database

JcCA0317081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317081.10 - phase: 0 
         (226 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29703.m001482 o-sialoglycoprotein endopeptidase, putative             419   e-118

>29703.m001482 o-sialoglycoprotein endopeptidase, putative
          Length = 227

 Score =  419 bits (1076), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 203/227 (89%), Positives = 217/227 (95%), Gaps = 1/227 (0%)

Query: 1   MEINSDVKDGSLILIKQGAEARVYESTFVGRQSIVKERFSKKYRHPSLDSKLTLKRLNAE 60
           MEI+SDVKDGSLILIKQGAEARV+ES+FVGR+SIVKERFSKKYRHPSLDSKLTLKRLNAE
Sbjct: 1   MEIDSDVKDGSLILIKQGAEARVFESSFVGRKSIVKERFSKKYRHPSLDSKLTLKRLNAE 60

Query: 61  ARCMTKARRLGVSTPVLYALDPLLHTLTFEYVDGHSVKDIFLEFGLHGVV-EERLADIAM 119
           ARCMTKARRLGVSTPVLYA+DPLL TL FE+V+G +VKDI LEFGL GVV EERL DIA 
Sbjct: 61  ARCMTKARRLGVSTPVLYAVDPLLQTLNFEFVEGRAVKDILLEFGLLGVVQEERLDDIAT 120

Query: 120 QIGDAIGKLHDGGLIHGDLTTSNMLIRNGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERA 179
           QIGDA+ KLHDGGLIHGDLTTSNMLIR+ +NQLVLIDFGLSFTSTLPEDKAVDLYVLERA
Sbjct: 121 QIGDAVAKLHDGGLIHGDLTTSNMLIRDASNQLVLIDFGLSFTSTLPEDKAVDLYVLERA 180

Query: 180 LLSMHSSCGNVMDRIIAAYKKSSKQWSSTMNKLAQVRQRGRKRTMVG 226
           LLSMHSSCGNVMDRI+AAY+KSSKQWSST+NKLAQVRQRGRKRTMVG
Sbjct: 181 LLSMHSSCGNVMDRILAAYRKSSKQWSSTINKLAQVRQRGRKRTMVG 227