Jatropha Genome Database

JcCA0316711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316711.10 + phase: 0 /partial
         (550 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28153.m000283 glutathione peroxidase, putative                        727   0.0  
29799.m000637 conserved hypothetical protein                          108   5e-24

>28153.m000283 glutathione peroxidase, putative
          Length = 1558

 Score =  727 bits (1877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/534 (73%), Positives = 428/534 (80%), Gaps = 10/534 (1%)

Query: 21  QWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVYFFGTQQIAFCNPADVEAFTE 80
           QWKVGDLVLAKVKGFPAWPATVSEPEKWGY+ADWKKVLVYFFGTQQIAFCNPADVEAFTE
Sbjct: 22  QWKVGDLVLAKVKGFPAWPATVSEPEKWGYAADWKKVLVYFFGTQQIAFCNPADVEAFTE 81

Query: 81  EKKQSLLVKRQGKGADFVRAVQEIIDSYEKSKKTNQADDLNSGEEVTLANGGNSMESSAD 140
           EKKQSLLVKRQGKGADFVRAVQEII+SYEK KK++Q DD NSGEE+TL NGG+SMESSA 
Sbjct: 82  EKKQSLLVKRQGKGADFVRAVQEIIESYEKLKKSDQVDDRNSGEEITLVNGGHSMESSAY 141

Query: 141 FESKGRTETSEATVTGRNDPSLGSSVAPDVSKIGSLLDKEALLEQPTDNVVVTAKPVITT 200
           FE KG+TETSEATVTGR+DP L    A DV + G+L DKE   EQP DN+ V  KP I T
Sbjct: 142 FELKGQTETSEATVTGRDDPGL----AVDVPQSGTLHDKEDSTEQPADNMAVPVKPGIAT 197

Query: 201 YTSRKRSGGLRTRKRATEKQDXXXXXXXXXXXXXXXXXQNLMIPSKLDGDMNVGDASTEV 260
           YTSRKRS GLR+RK A +K D                 QN M+PS  +G  + GDAST+V
Sbjct: 198 YTSRKRSLGLRSRKHAAQKNDSSVERSGSLPRLESSRFQNFMLPSN-EGSKSAGDASTDV 256

Query: 261 ILDRSLRRNKRVRKSPDASEWDDVDSSAHVSNGSIEDNSSEIVTVDSDSLSLNEGSTIDS 320
           I DR+LRRNKR R+SPDASEWDDVDSSA VSNGSIED+ SEIVTVDSDSLSLNEGSTIDS
Sbjct: 257 ISDRALRRNKRTRRSPDASEWDDVDSSAFVSNGSIEDDGSEIVTVDSDSLSLNEGSTIDS 316

Query: 321 ESKPEHSETVVECLEGDVELSKGLDFQIKAVVIKKKRKPNRKRVTNEAAEQHV-RLETEA 379
            SKPEHSET VECLEGDVELSKGLDFQIKAV IKKKRK NRKRV+NEAAE    RLETE 
Sbjct: 317 ASKPEHSETFVECLEGDVELSKGLDFQIKAVFIKKKRKQNRKRVSNEAAEPPARRLETEV 376

Query: 380 DLDAGVHSSSQNSQSC-ENLNERHNKEDGDEHLPLVKRARVRMGKLXXXXXXXXXXXXXX 438
            LDA  HSSSQN ++  +NLNERHNKEDGDEHLPLVKRARVRMGKL              
Sbjct: 377 YLDAETHSSSQNLKNAGDNLNERHNKEDGDEHLPLVKRARVRMGKL-SSLQEHASFSQDE 435

Query: 439 XKISHGVA--PSEVHNGLCPVEERSPNEVAVAMVEQIGPPTNFNDDCSADKGLFSVKGAV 496
            KIS+ VA  P+EV+NGLC VEER+ NEVAVA +E+I P  N +DDCSADK  FS+KGA+
Sbjct: 436 EKISNEVAINPTEVNNGLCQVEERTLNEVAVATLERIVPSDNLSDDCSADKDSFSLKGAL 495

Query: 497 DNASTQKVFVQIPANRSQLSIVKENQSFGCSADGEAALPPSKRLHRALEAMSAN 550
           D AS  K   QIP NR Q+ I+KE+QSFGC+ADGEAALPPSKRLHRALEAMSAN
Sbjct: 496 DIASPPKAHAQIPVNRPQILILKESQSFGCTADGEAALPPSKRLHRALEAMSAN 549


>29799.m000637 conserved hypothetical protein
          Length = 1425

 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 63/93 (67%)

Query: 21  QWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVYFFGTQQIAFCNPADVEAFTE 80
           Q K+GDLVLAKVKGFPAWPA +S PE W  + D KK  V FFGT++IAF  PAD++ FT 
Sbjct: 17  QLKLGDLVLAKVKGFPAWPAKISRPEDWERAPDPKKYFVQFFGTEEIAFVAPADIQVFTR 76

Query: 81  EKKQSLLVKRQGKGADFVRAVQEIIDSYEKSKK 113
           E    L  + QGK   F +AV+EI  ++++  K
Sbjct: 77  ELMNKLSARCQGKTKYFAQAVKEICTAFQEIDK 109