Jatropha Genome Database

JcCA0316451.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316451.20 + phase: 0 
         (360 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29851.m002456 NAD dependent epimerase/dehydratase, putative           564   e-161
29751.m001880 conserved hypothetical protein                           83   3e-16
29693.m002032 conserved hypothetical protein                           77   1e-14
29767.m000205 conserved hypothetical protein                           74   8e-14
30024.m001750 hypothetical protein                                     57   1e-08

>29851.m002456 NAD dependent epimerase/dehydratase, putative
          Length = 584

 Score =  564 bits (1454), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 263/312 (84%), Positives = 291/312 (93%)

Query: 20  RSGFLEKTSVRGHFLRFPSFNKYPHARKLKSFDIKAQASGVTKYSSGAVEATPKEVDVKD 79
           +SGFL KT + G  +RF SF+KYPHARK+++F IKAQASGVTK+SSGA+EA PKE D+KD
Sbjct: 20  KSGFLHKTFLHGQLIRFSSFSKYPHARKIRTFGIKAQASGVTKFSSGAIEAIPKETDIKD 79

Query: 80  DNLAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQKAQSLVQSVKQMKLNGEGSQYVEK 139
           DNLAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQ+AQ+LVQSVKQMKL+GEG+Q +EK
Sbjct: 80  DNLAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQRAQTLVQSVKQMKLDGEGAQPIEK 139

Query: 140 LELVECDLEKPNEIGPALGNASVVICCIGASEKEVFDVTGPYRIDYQATKNLIDAASAAK 199
            E++ECDL+KPNEIG ALGNAS+VICCIGA EKEVFD TGPYRIDYQAT+NLIDAA+ AK
Sbjct: 140 FEIIECDLDKPNEIGAALGNASIVICCIGAGEKEVFDFTGPYRIDYQATRNLIDAATVAK 199

Query: 200 VKHFIMVSSLGTNKVGFPAAILNLFWGVLIWKRQAEEALIASGVPYTIVRPGGMERPTDA 259
           VKHFIMVSSLGTNKVGFPAAILNLFWGVL WKR+AEEALIASG+PYTIVRPGGMERPTDA
Sbjct: 200 VKHFIMVSSLGTNKVGFPAAILNLFWGVLFWKRKAEEALIASGIPYTIVRPGGMERPTDA 259

Query: 260 YKETHNITLSEEDTLFGGQVSNLQVAELIAVMAKNRGLSYCKVVEVIAETTAPLTPMEEL 319
           YKETHNITLSEEDTLFGGQVSNLQVAEL+AVMAKN  LSYCKVVEVIAETTAPLT M++L
Sbjct: 260 YKETHNITLSEEDTLFGGQVSNLQVAELMAVMAKNLDLSYCKVVEVIAETTAPLTTMDKL 319

Query: 320 LAKIPSQRVVPK 331
           L +IPSQR+ PK
Sbjct: 320 LTRIPSQRIKPK 331


>29751.m001880 conserved hypothetical protein
          Length = 513

 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 122/258 (47%), Gaps = 22/258 (8%)

Query: 78  KDDNLAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQKAQSLVQSVKQMKLNGEGSQYV 137
           KD +  FVAGATG  G R  + LL+ GF VRAGV   + AQ L +   + K+  +  +  
Sbjct: 92  KDPSTVFVAGATGLAGIRIAQTLLREGFSVRAGVSELEAAQDLARFAAEYKIISK--EES 149

Query: 138 EKLELVECDLEKPNEIGPALGNASVVICCIGASEKEVFDVTGPY-RIDYQATKNLIDAAS 196
            +L  V+   +    I  A+GNAS V+  IG +E       GP   +       +I AA 
Sbjct: 150 RRLNAVQSTFKDAESIAKAIGNASKVVVTIGPAE------NGPTSEVSSADALQVIQAAQ 203

Query: 197 AAKVKHFIMV--SSLGTNKVGFPAAILNLFWGVLIWKRQA------EEALIASGVPYTIV 248
            A V H  ++  S++ +         L  F+  L  + Q        + +I + V YT +
Sbjct: 204 LAGVGHVAIIYDSNIASGSTYNVLDGLTSFFNNLFSQYQPLSIPEFLQKVIETDVSYTFI 263

Query: 249 RPGGMERPTDAYKE-THNITLSEEDTLFGG-QVSNLQVAELIAVMAKNRGLSYCKVVEVI 306
           +    E   D   E ++N+ +S E +     +V+  Q+A ++A +  N  ++  KVVE+ 
Sbjct: 264 KTSLTE---DFSPECSYNLVVSAEGSTGSDYKVAKSQIASVVANVFSNTAVAENKVVEIF 320

Query: 307 AETTAPLTPMEELLAKIP 324
            + +AP   ++EL + IP
Sbjct: 321 TDPSAPSKSVDELFSAIP 338


>29693.m002032 conserved hypothetical protein
          Length = 238

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 111/253 (43%), Gaps = 65/253 (25%)

Query: 74  EVDVKDDNLAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQKAQSLVQSVKQMKLNGEG 133
           E  V      FVAGATG  G R V +LL  GF+V+AGVR  +KA+S       +K N   
Sbjct: 45  ETQVTSKKKIFVAGATGSTGKRIVEQLLAKGFEVKAGVRDVEKAKS-----NFVKDN--- 96

Query: 134 SQYVEKLELVECDL-EKPNEIGPALGNAS-VVICCIGASEKEVFDVTGPYR-IDYQATKN 190
                 L++V+ D+ +   ++  A+G+ S  VIC  G   +  +D+  P++ I Y     
Sbjct: 97  ----PSLQIVKADVTDGSAKLAEAIGDDSEAVICATGF--RPGWDLFAPWKAICYSP--- 147

Query: 191 LIDAASAAKVKHFIMVSSLGTNKVGFPAAILNLFWGVLIWKRQAEEALIASGVPYTIVRP 250
                                                   K QAE+ +  SG+ YTI+RP
Sbjct: 148 ----------------------------------------KLQAEQYIRRSGIKYTIIRP 167

Query: 251 GGMERPTDAYKETHNITLSEEDTLFGGQVSNLQVAELIAVMAKNRGLSYCKVVEVIAETT 310
           GG++        + N+ +  EDTL+ G +S   VAE +AV A     S  KVVE+++   
Sbjct: 168 GGLKNDP----PSGNVVMEPEDTLYEGNISRDLVAE-VAVEALVHPESSYKVVEIVSRAE 222

Query: 311 APLTPMEELLAKI 323
           AP     +L   I
Sbjct: 223 APRRTYNDLFGSI 235


>29767.m000205 conserved hypothetical protein
          Length = 323

 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 53/274 (19%)

Query: 34  LRFPSFNKYPHARKLKSFDIKAQASGVTKYSSGAVEATPKEVDVKDDNLAFVAGATGRVG 93
           L FPS +K        + + KA    +   S+   ++T   V         V GA GR G
Sbjct: 44  LSFPSLSK--------THNCKAGFRKLVAVSASMTDSTSSTV--------LVTGAGGRTG 87

Query: 94  SRTVRELLKLGFQVRAGVRSAQK-AQSLVQSVK-QMKLNGEGSQYVEKLELVECDLEKPN 151
           S   ++L +         RS Q  A+ LV++ + + K++G    ++        D+ +  
Sbjct: 88  SIVYKKLKE---------RSGQYVARGLVRTQESKDKISGAEDVFI-------GDIRETE 131

Query: 152 EIGPALGNASVVICCIGA--SEKEVFDVTG-------------PYRIDYQATKNLIDAAS 196
            I PA+     +I    A    K  FD T              P ++D+   KN IDAA 
Sbjct: 132 SIVPAIQGIDALIILTSAVPKMKPGFDPTKGGRPEFYFEDGAYPEQVDWTGQKNQIDAAK 191

Query: 197 AAKVKHFIMVSSLGTNKVGFPAAILNLFWGVLIWKRQAEEALIASGVPYTIVRPGGMERP 256
           AA VK  ++V S+G   +  P   L     +L+WKR+AE+ L  SG+PYTI+R GG++  
Sbjct: 192 AAGVKQIVLVGSMGGTNLNHPLNSLG-NGNILVWKRKAEQYLADSGIPYTIIRAGGLQDK 250

Query: 257 TDAYKETHNITLSEEDTLFGGQVSNLQVAELIAV 290
               +E   + + ++D L   +   +  A++  V
Sbjct: 251 EGGVRE---LLIGKDDELLQTETRTIARADVAEV 281


>30024.m001750 hypothetical protein
          Length = 385

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 32/201 (15%)

Query: 82  LAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQKAQSLVQSVKQMKLNGEGSQYVEKLE 141
           L  V G +G VG   V  LL    + R  +R   KA +L            G Q  E L+
Sbjct: 94  LVLVIGGSGGVGQLVVASLLNRNIKSRLLLREPAKATALF-----------GKQDEEMLQ 142

Query: 142 LVECDLEKPNEIGPALGNA-SVVICCIGA----SEKEVFDVTGPYRIDYQATKNLIDAAS 196
           + E D   P ++ P++    + VICC G     S +   D T P R+D++  +NLI +A 
Sbjct: 143 VFEGDTRNPGDLDPSIFKGITHVICCTGTTAFPSRRWNGDNT-PERVDWEGVRNLI-SAM 200

Query: 197 AAKVKHFIMVSSLGTNKVGFPAAILNLFW--GVLIWKRQAEEA----LIASGVPYTIVRP 250
            + +K  ++VSS+G  K         L W  G +I+++    A    L+A   P T+  P
Sbjct: 201 PSTLKRVVLVSSVGVTKFN------ELPWRDGKIIFQQSGSSAITPGLVAKDEP-TLTAP 253

Query: 251 GGMERPTDA-YKETHNITLSE 270
                 ++A YK   N TL++
Sbjct: 254 SQTYMISEAQYKWGWNPTLTK 274