Jatropha Genome Database

JcCA0316351.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316351.20 + phase: 0 
         (137 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007100 vacuolar proton atpase, putative                        206   3e-54
30170.m014123 vacuolar proton atpase, putative                        168   7e-43
29688.m000259 vacuolar proton atpase, putative                        149   4e-37

>30131.m007100 vacuolar proton atpase, putative
          Length = 814

 Score =  206 bits (523), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 100/124 (80%), Positives = 106/124 (85%)

Query: 1   MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSPFQRTYAAQIKKCGEM 60
           MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLN+EKSPFQRTYAAQ+KKCGEM
Sbjct: 7   MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNSEKSPFQRTYAAQLKKCGEM 66

Query: 61  ARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDKLQRTYNE 120
           ARKLRFFK+QMEKAG  PSSKS T+ +I+MDG              MNANNDKLQRTYNE
Sbjct: 67  ARKLRFFKDQMEKAGVFPSSKSTTRNDINMDGLDIKLGELEAELVEMNANNDKLQRTYNE 126

Query: 121 LIEY 124
           LIEY
Sbjct: 127 LIEY 130


>30170.m014123 vacuolar proton atpase, putative
          Length = 810

 Score =  168 bits (426), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 93/124 (75%)

Query: 1   MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSPFQRTYAAQIKKCGEM 60
           MDL RSE MQLVQLIIPIESAH ++SYLGDLGL QFKDLNAEKSPFQRTYA QIK+C EM
Sbjct: 3   MDLLRSEPMQLVQLIIPIESAHRSISYLGDLGLFQFKDLNAEKSPFQRTYATQIKRCAEM 62

Query: 61  ARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDKLQRTYNE 120
           ARKLRFF+E M K    PS++S    +I++D               +N+NN+KL+RTYNE
Sbjct: 63  ARKLRFFRENMTKTSLLPSTRSARGIDINLDNLEVKLAELEAELIEINSNNEKLERTYNE 122

Query: 121 LIEY 124
           L+EY
Sbjct: 123 LLEY 126


>29688.m000259 vacuolar proton atpase, putative
          Length = 822

 Score =  149 bits (376), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 92/124 (74%)

Query: 1   MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSPFQRTYAAQIKKCGEM 60
           MDL RSE M  VQLIIP+ESAH  +SYLG+LGLLQF+DLNA+KSPFQRT+  Q+K+CGEM
Sbjct: 14  MDLMRSEKMTFVQLIIPVESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCGEM 73

Query: 61  ARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDKLQRTYNE 120
           +RKLRFFK+Q+ KAG   S+  V + +++++               MN+N +KLQR+YNE
Sbjct: 74  SRKLRFFKDQINKAGLLSSTLPVVEPDVELEELELQLAEHEHELMEMNSNGEKLQRSYNE 133

Query: 121 LIEY 124
           L+E+
Sbjct: 134 LLEF 137