Jatropha Genome Database

JcCA0316341.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316341.20 - phase: 0 
         (248 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30154.m001142 conserved hypothetical protein                          394   e-110
29792.m000621 conserved hypothetical protein                          185   2e-47
29827.m002641 conserved hypothetical protein                           67   1e-11
29589.m001276 conserved hypothetical protein                           58   3e-09
30055.m001625 conserved hypothetical protein                           51   4e-07
30174.m008700 conserved hypothetical protein                           49   3e-06
29866.m000622 conserved hypothetical protein                           47   1e-05

>30154.m001142 conserved hypothetical protein
          Length = 254

 Score =  394 bits (1012), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/225 (84%), Positives = 203/225 (90%), Gaps = 2/225 (0%)

Query: 24  SNQAARSQTSTALLLPPNSESKRSRKQPVFIHHPRPRRTNPIVWFGAILCLIFSLVLIFF 83
           S Q     +STA+ +P +SE KRSRKQP  + HPRPRRTNP+VWFGA+LCLIFSL LIFF
Sbjct: 32  SKQPGIQPSSTAVDIP-SSERKRSRKQPS-LQHPRPRRTNPVVWFGAVLCLIFSLTLIFF 89

Query: 84  GIATLIIYLSIKPRSPVFDTPNANLNTIYFDSPEYFNGDLTFLANFSNPNQKIDVRFEYA 143
           GIATLIIYL+IKPRSPVFDTPNANLN IYFDSPEYFNGDLTFLANFSNPNQKIDVRFEY 
Sbjct: 90  GIATLIIYLAIKPRSPVFDTPNANLNNIYFDSPEYFNGDLTFLANFSNPNQKIDVRFEYV 149

Query: 144 EIELYFYDRLIGIQALQPFTQRRRETRLESVHIISSLVYLPHNFAIELQKQVQSNKVIYN 203
            IELYF+DRLIGIQ LQPFTQRR ETRLESVH ISSLVYLPHN   ELQKQVQSNKVIYN
Sbjct: 150 SIELYFFDRLIGIQTLQPFTQRRHETRLESVHFISSLVYLPHNLGAELQKQVQSNKVIYN 209

Query: 204 IRGTFKVRANLGLLHYSYWLHGRCEIEMTGPPTGVLVARSCKTKR 248
           +RGTF+VRA+LGL+HYSYWLHGRCEIEMTGPPTGVLVARSCKTKR
Sbjct: 210 VRGTFRVRASLGLIHYSYWLHGRCEIEMTGPPTGVLVARSCKTKR 254


>29792.m000621 conserved hypothetical protein
          Length = 389

 Score =  185 bits (469), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 38  LPPNSESKRSRKQPVFIHHPRPRRTNPIVWFGAILCLIFSLVLIFFGIATLIIYLSIKPR 97
           LPP +  +   +Q   +  P P+RT PI W  A  C IF +V+   G+  LI+YL  +PR
Sbjct: 179 LPP-AHQENCPRQSSGLRTPAPQRTRPITWLAAAFCAIFWIVIFLGGLIVLIVYLVYRPR 237

Query: 98  SPVFDTPNANLNTIYFDSPEYFNGDLTFLANFSNPNQKIDVRFEYAEIELYFYDRLIGIQ 157
           SP F+  N +LN +Y D+    N D+T LANF+NPN+K+ V F +  I+LY+ + LI  Q
Sbjct: 238 SPRFEVSNVSLNAVYVDAGSLLNADITLLANFTNPNKKVAVDFNHIIIDLYYGNTLIATQ 297

Query: 158 ALQPFTQRRRETRLESVHIISSLVYLPHNFAIELQKQVQSNKVIYNIRGTFKVRANLG-L 216
            ++ F+  R ++   +VH+++S V LP   + +LQ+Q   N +I+N++G F+VR+NLG  
Sbjct: 298 YIESFSTARAQSVFANVHMVTSQVLLPLGESAQLQEQSNKNGIIFNVKGVFRVRSNLGSF 357

Query: 217 LHYSYWLHGRCEIEMTGPPTGVLVARSCKTKR 248
           L YSY L+G C I +T PP+GVL A  C+TKR
Sbjct: 358 LRYSYRLYGHCTIMLTAPPSGVLRATRCRTKR 389


>29827.m002641 conserved hypothetical protein
          Length = 201

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 1/190 (0%)

Query: 59  PRRTNPIVWFGAILCLIFSLVLIFFGIATLIIYLSIKPRSPVFDTPNANLNTIYFDSPEY 118
           P+RT+   W  AI+C + ++ +I  GI   + YL I PR P+    NA+LN   +D    
Sbjct: 10  PQRTSLFWWLAAIICSVLTIAVIVAGIVVFVGYLVIHPRIPIISVLNAHLNQFQYDQAGV 69

Query: 119 FNGDLTFLANFSNPNQKIDVRFEYAEIELYFYDRLIGIQALQPFTQRRRETRLESVHIIS 178
               +  +    N N K    F   ++ L+F    I      P+  ++  T   +    S
Sbjct: 70  LVTQVNIIVRSENDNTKAHASFSDMKLTLFFDGLAIAHLVAGPYEVKKNSTVDFNYVATS 129

Query: 179 SLVYLPHNFAIELQKQVQSNKVIYNIRGTFKVRANLGLL-HYSYWLHGRCEIEMTGPPTG 237
             + L      ++   +  ++V ++++G  + R  +GLL    +  H  C+++       
Sbjct: 130 DPIPLNPEQMKDVDAFLNEDEVRFDLKGNARARWRVGLLGSVKFQCHLSCQLKFYRSSGI 189

Query: 238 VLVARSCKTK 247
            +  R C +K
Sbjct: 190 YIPGRHCTSK 199


>29589.m001276 conserved hypothetical protein
          Length = 203

 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 85/167 (50%), Gaps = 7/167 (4%)

Query: 57  PRPRRTNPIVWFGAILCLIFSLVLIFFGIATLIIYLSIKPRSPVFDTPNANLNTIYFDSP 116
           PRP  +     F  I  LI +L++I  G+  LI +L I+P+S  +   N +++ +  +S 
Sbjct: 13  PRPAHSK---LFRVIAVLILTLIVIV-GLVVLITWLIIRPKSMEYSIENGSVHNLNLNSN 68

Query: 117 EYFN-GDLTFLANFSNPNQKIDVRFEYAEIELYFYDRLIGIQALQPFTQ-RRRETRLESV 174
                    F+    NPN +I + ++Y ++ L + D+ +    L+PF Q RR  TRLE+ 
Sbjct: 69  NNHLNASFDFVIRAYNPNTRISIYYDYIDVSLSYDDQTLAFNTLEPFHQPRRNVTRLEA- 127

Query: 175 HIISSLVYLPHNFAIELQKQVQSNKVIYNIRGTFKVRANLGLLHYSY 221
            I +    L    + +++ +  S ++  ++R   ++R  +G++ + +
Sbjct: 128 KIEARDAALSQALSKDMRIEKASGQLQLDLRLKARIRFKVGVMKFKH 174


>30055.m001625 conserved hypothetical protein
          Length = 210

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 82/181 (45%), Gaps = 12/181 (6%)

Query: 55  HHPRPRRTNPIVWFGAILCLIFSLVLIFFGIATLIIYLSIKPRSPVFDTPNANLNTIYFD 114
           HH +    +  +++G I   +  LV+IFF      I+L ++P  P F   +A +N + F 
Sbjct: 8   HHGQKHELHRRLFWGIITLAVIVLVVIFF------IWLILQPHKPRFILQDATVNALTFS 61

Query: 115 SPEYFNGDLTFLANFSNPNQKIDVRFEYAEIELYFYDRLIGIQALQPFT-QRRRETRLES 173
              +   ++    +  NPN++I + +E  +I   + ++ + +    P + Q  ++  + S
Sbjct: 62  GTNFLTSNIQVTLSTKNPNERIGIYYEKLDIYASYRNQQMTLGTQLPRSYQGHKDITIWS 121

Query: 174 VHIISSLVYLPHNFAIELQKQVQSNKVIYNIRGTFKVRANLGLLHYSYWLHGRCEIEMTG 233
             +  + V +    A  L + + +  V+ NI+    ++  +G      W+ GR  I +  
Sbjct: 122 PFLYGNSVPMSPYLASALNEDLDAGAVLVNIKVDGYLKWKVG-----SWISGRYRINVNC 176

Query: 234 P 234
           P
Sbjct: 177 P 177


>30174.m008700 conserved hypothetical protein
          Length = 243

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 16/170 (9%)

Query: 56  HPRPRRTNPIVWFGAILCLI-----FSLVLIFFGIATLIIYLSIKPRSPVFDTPNANLNT 110
            PR RR N    +G + C I     F+++LI F I   + YL   P+ PVF   +  +++
Sbjct: 42  QPRKRRKN----YGGMCCRILVIISFTVLLILF-ILGGVFYLWFDPKLPVFHLQSFKISS 96

Query: 111 IYFDS-PE--YFNGDLTFLANFSNPNQKIDVRFEYAEIELYF---YDRLIGIQALQPFTQ 164
               + P+  Y N          NPN K+  R+  +++++         +G  +L  F Q
Sbjct: 97  FRVTTKPDGTYLNAATVARVEVRNPNSKLTYRYSESQVQMTLGQDQGTQLGSMSLPGFLQ 156

Query: 165 RRRETRLESVHIISSLVYLPHNFAIELQKQVQSNKVIYNIRGTFKVRANL 214
            ++ T    + +      +       L+ Q +S K++ N++ T KV  ++
Sbjct: 157 DKKNTTSFKIQMSVKNELIEDGVGSRLKSQFKSRKLVVNVQVTTKVGVDV 206


>29866.m000622 conserved hypothetical protein
          Length = 212

 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 15/158 (9%)

Query: 95  KPRSPVFDTPNANLNTIYFDSPEYFNGDLTFLANFSNPNQKIDVRFEYAEIELYFYDRLI 154
           +P  P F    A++  +    P   N  +       NPN K+ + ++  +    +  + I
Sbjct: 51  RPTKPEFSLKEADVYQLNISGPNLLNSSIQLTLLSKNPNDKVGIYYDELQAYAAYKGQQI 110

Query: 155 GIQ-ALQPFTQRRRETRLESVHIISSLVYLPHNFAIELQKQVQSNKVIYNIRGTFKVRAN 213
            +   L PF Q  +++ L +  +I S + +  +F  E+ +     K++ +++   ++R  
Sbjct: 111 TVDTTLPPFYQGHQDSNLLTASLIGSGLPVASSFGYEVGRDQTVGKLVLSLKVNGRIRWK 170

Query: 214 LGLLHYSYWLHGRCEIEMT-------GP--PTGVLVAR 242
           +G+     W+ GR  I +        GP  PTG L ++
Sbjct: 171 VGI-----WVSGRYRINVNCIAVVAFGPNLPTGPLSSK 203