Jatropha Genome Database

JcCA0316341.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316341.10 + phase: 0 /partial
         (138 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30154.m001143 UV-induced protein uvi31, putative                      189   3e-49
30172.m000203 UV-induced protein uvi31, putative                      109   4e-25
30148.m001457 transcription regulator, putative                        53   4e-08
30206.m000768 transcription regulator, putative                        52   1e-07

>30154.m001143 UV-induced protein uvi31, putative
          Length = 304

 Score =  189 bits (481), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 102/149 (68%), Positives = 118/149 (79%), Gaps = 19/149 (12%)

Query: 9   NKVDSVKNEVKSANLE----------SNDDVGVD--------SLSMGMNSEVDNLGSRGK 50
           NK+DS +NEV S+NL           SN+D+G          S   G ++++DNLGSRGK
Sbjct: 156 NKIDSTQNEVNSSNLGKGGDQNSSIGSNEDLGTSLESKAAASSGGSGGSNDLDNLGSRGK 215

Query: 51  RIKEILERELKPIELEVEDISYQHAGHAGVRGSD-GETHFNLRVVSKEFEGKSLVKRHRL 109
           RIKEILE+EL PIELEVED+SYQHAGHAGVRG+D GETHFNL+VVSKEF+GKSLVKRHRL
Sbjct: 216 RIKEILEKELSPIELEVEDVSYQHAGHAGVRGNDDGETHFNLKVVSKEFDGKSLVKRHRL 275

Query: 110 IYGLLQEELQSGLHALSIVAKTPAEVDAR 138
           IYGLLQEELQ GLHALSIVAKTP E++AR
Sbjct: 276 IYGLLQEELQGGLHALSIVAKTPTEIEAR 304


>30172.m000203 UV-induced protein uvi31, putative
          Length = 111

 Score =  109 bits (273), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 48/87 (55%), Positives = 65/87 (74%)

Query: 48  RGKRIKEILERELKPIELEVEDISYQHAGHAGVRGSDGETHFNLRVVSKEFEGKSLVKRH 107
           R  R+K  L+  L+   +E+ED+SYQHAGH+  +G   ETHFNL++VS +F  ++LVKRH
Sbjct: 12  RANRMKSKLQSALEATVIEIEDVSYQHAGHSAFKGDHAETHFNLKIVSPKFHQQTLVKRH 71

Query: 108 RLIYGLLQEELQSGLHALSIVAKTPAE 134
           R++Y  L +EL+ GLHALSIVAKTP E
Sbjct: 72  RMVYDALADELRCGLHALSIVAKTPRE 98


>30148.m001457 transcription regulator, putative
          Length = 174

 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)

Query: 84  DGETHFNLRVVSKEFEGKSLVKRHRLIYGLLQEELQSGLHAL-SIVAKTPAEVDAR 138
           DG  H ++ V+S  FEG+S V R R++Y  + EELQS +HA+  +  KTPAE  A+
Sbjct: 119 DGR-HVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQ 173


>30206.m000768 transcription regulator, putative
          Length = 93

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 13/89 (14%)

Query: 45  LGSRGKRIKEILERELKPIELEVEDISYQHAGHAGVRGSDGETHFNLRVVSKEFEGKSLV 104
           +G   ++++  L+ +L P  LEV D S    G  G         F + +VS++FEGK L+
Sbjct: 1   MGVTKEQVESTLKTKLNPSHLEVTDTS----GGCGAS-------FAIEIVSEQFEGKRLL 49

Query: 105 KRHRLIYGLLQEELQSGLHALSI-VAKTP 132
           +RHRL+   L+EE++  +HALSI  A TP
Sbjct: 50  ERHRLVNAALEEEMKQ-IHALSIKKAVTP 77