Jatropha Genome Database

JcCA0316141.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316141.30 - phase: 1 /partial
         (243 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29235.m000235 1-deoxyxylulose-5-phosphate synthase, putative          463   e-131
27506.m000052 1-deoxyxylulose-5-phosphate synthase, putative          394   e-110
29726.m003963 1-deoxyxylulose-5-phosphate synthase, putative          387   e-108
29912.m005583 1-deoxyxylulose-5-phosphate synthase, putative          301   2e-82
30128.m009036 pyruvate dehydrogenase, putative                         51   6e-07

>29235.m000235 1-deoxyxylulose-5-phosphate synthase, putative
          Length = 714

 Score =  463 bits (1191), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 222/240 (92%), Positives = 229/240 (95%)

Query: 4   WTKVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELVH 63
           + +VVHDVDLQKLPVRFA+DRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAEL+H
Sbjct: 475 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMH 534

Query: 64  MVATAAAIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNSVAILGYGSIVR 123
           MVATAAAIDDRPSCFRFPRGNGIG ALPPNNKGT LEIGKGRILMEGN VAILGYGSIV+
Sbjct: 535 MVATAAAIDDRPSCFRFPRGNGIGVALPPNNKGTTLEIGKGRILMEGNRVAILGYGSIVQ 594

Query: 124 QCVEAANKLRTRDISVTVADARFCKPLDTDLIRRLTREHEILITVEEGSIGGFCSHVSHF 183
           QCVEAA  LRTRDI VTVADARFCKPLDTDLIRRL +EHE LITVEEGSIGGFCSHVSHF
Sbjct: 595 QCVEAAGMLRTRDIYVTVADARFCKPLDTDLIRRLAKEHEFLITVEEGSIGGFCSHVSHF 654

Query: 184 LSLSGILDGDLKLRSMVLPDRYIDHGSPQDQIQEAGLSSNHIAATVLSLLGKPKEALQFK 243
           LSL+GILDG LKLRSMVLPDRYIDHGSP DQIQEAGLSSNHIAATVLSLLGKPKEALQFK
Sbjct: 655 LSLNGILDGPLKLRSMVLPDRYIDHGSPLDQIQEAGLSSNHIAATVLSLLGKPKEALQFK 714


>27506.m000052 1-deoxyxylulose-5-phosphate synthase, putative
          Length = 728

 Score =  394 bits (1012), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 183/239 (76%), Positives = 213/239 (89%)

Query: 4   WTKVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELVH 63
           + +VVHDVDLQKLPVRFA+DRAGLVGADGPTHCGAFD+TYMACLPNMVVMAPSDE EL+H
Sbjct: 487 YDQVVHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDETELMH 546

Query: 64  MVATAAAIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNSVAILGYGSIVR 123
           MVATAAAIDDRPSCFR+PRGNGIG  LPPNNKGTPLEIGKGRIL EG+ VA+LGYG++V+
Sbjct: 547 MVATAAAIDDRPSCFRYPRGNGIGTILPPNNKGTPLEIGKGRILREGSRVALLGYGTMVQ 606

Query: 124 QCVEAANKLRTRDISVTVADARFCKPLDTDLIRRLTREHEILITVEEGSIGGFCSHVSHF 183
            C+ AA+ L+  +I+ TVADARFCKPLD  L+R+L +EHEILITVEEGSIGGF SHV++F
Sbjct: 607 SCLAAADLLKKFNITATVADARFCKPLDGQLVRQLAQEHEILITVEEGSIGGFGSHVANF 666

Query: 184 LSLSGILDGDLKLRSMVLPDRYIDHGSPQDQIQEAGLSSNHIAATVLSLLGKPKEALQF 242
           L L+G+LDG+LK R M+LPDRYIDHGS  DQI+EAGLSS HIAATV+SL+G  K++L  
Sbjct: 667 LCLNGLLDGNLKWRPMMLPDRYIDHGSQTDQIEEAGLSSKHIAATVVSLIGGQKDSLHL 725


>29726.m003963 1-deoxyxylulose-5-phosphate synthase, putative
          Length = 720

 Score =  387 bits (993), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 178/238 (74%), Positives = 207/238 (86%)

Query: 4   WTKVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELVH 63
           + +VVHDVDLQKLPVRFA+DRAGLVGADGPTHCGAFD+T+MACLPNMVVMAPSDEAEL H
Sbjct: 479 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFH 538

Query: 64  MVATAAAIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNSVAILGYGSIVR 123
           MVATAAAIDDRPSCFR+PRGNGIG  LPP NKG PLE+GKGRIL+EG  VA+LGYGS V+
Sbjct: 539 MVATAAAIDDRPSCFRYPRGNGIGVQLPPGNKGIPLEVGKGRILIEGERVALLGYGSAVQ 598

Query: 124 QCVEAANKLRTRDISVTVADARFCKPLDTDLIRRLTREHEILITVEEGSIGGFCSHVSHF 183
            C+ AA+ + T D+ +TVADARFCKPLD  LIR L + HE+LITVEEGSIGGF SHV+HF
Sbjct: 599 SCLAAASLMETYDLRITVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVAHF 658

Query: 184 LSLSGILDGDLKLRSMVLPDRYIDHGSPQDQIQEAGLSSNHIAATVLSLLGKPKEALQ 241
           L+L G+LDG LK R ++LPDRYIDHGSP DQ+ EAGL+ +HIAAT+ ++LG  +EALQ
Sbjct: 659 LALDGLLDGKLKWRPVILPDRYIDHGSPADQLVEAGLTPSHIAATIFNILGNKREALQ 716


>29912.m005583 1-deoxyxylulose-5-phosphate synthase, putative
          Length = 717

 Score =  301 bits (771), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 144/237 (60%), Positives = 181/237 (76%), Gaps = 1/237 (0%)

Query: 4   WTKVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELVH 63
           + +VVHDVD Q++PVRF +  AGLVG+DGP  CGAFDIT+M+CLPNM+VMAPSDE ELV 
Sbjct: 478 YDQVVHDVDQQRIPVRFVITSAGLVGSDGPMQCGAFDITFMSCLPNMIVMAPSDEDELVD 537

Query: 64  MVATAAAIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNSVAILGYGSIVR 123
           MVATA  IDD P CFR+PRG  +G        G P+EIGKG++L+EG  VA+LGYG++V+
Sbjct: 538 MVATAVQIDDHPVCFRYPRGAIVGTD-HYMRIGIPIEIGKGKVLIEGKDVALLGYGAMVQ 596

Query: 124 QCVEAANKLRTRDISVTVADARFCKPLDTDLIRRLTREHEILITVEEGSIGGFCSHVSHF 183
            C++A + L    I VTVADARFCKPLD  L+R+L   H  L+TVEEGS+GGF SHV+ F
Sbjct: 597 NCLKARHLLSKLGIEVTVADARFCKPLDMKLLRQLCENHAFLVTVEEGSVGGFGSHVAQF 656

Query: 184 LSLSGILDGDLKLRSMVLPDRYIDHGSPQDQIQEAGLSSNHIAATVLSLLGKPKEAL 240
           LSL G LDG +K R +VLPD YI+H  P++Q+  AGL+ +HIAATVL LLG+ +EAL
Sbjct: 657 LSLDGQLDGKVKWRPIVLPDTYIEHALPKEQLNLAGLTGHHIAATVLRLLGRTREAL 713


>30128.m009036 pyruvate dehydrogenase, putative
          Length = 368

 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 66/155 (42%), Gaps = 17/155 (10%)

Query: 26  GLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELVHMVATAAAIDDRPSCF------- 78
           G     G  H   +   Y +C P + V+AP   +E    +  AA  D  P  F       
Sbjct: 151 GAAAGVGAQHSQCYASWYASC-PGLKVLAPYS-SEDARGLLKAAIRDPDPVVFLENELLY 208

Query: 79  --RFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNSVAILGYGSIVRQCVEAANKLRTRD 136
              FP    + A +  ++  TP  IGK +I  EG  V I  +  +V   ++AA  L    
Sbjct: 209 GESFP----VSAEVLDSSFCTP--IGKAKIEREGKDVTITAFSKMVGYALKAAELLAKEG 262

Query: 137 ISVTVADARFCKPLDTDLIRRLTREHEILITVEEG 171
           IS  V + R  +PLD   I    R+   L+TVEEG
Sbjct: 263 ISAEVINLRSIRPLDRPTINASVRKTNRLVTVEEG 297