Jatropha Genome Database

JcCA0315721.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0315721.30 - phase: 0 /partial
         (323 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28153.m000272 ATP binding protein, putative                           491   e-139
29844.m003302 ATP binding protein, putative                           307   4e-84
29851.m002444 tRNA delta(2)-isopentenylpyrophosphate transferase...   268   3e-72
29851.m002452 ATP binding protein, putative                           263   6e-71
30066.m000705 adenylate dimethylallyltransferase, putative            233   7e-62
29791.m000555 tRNA delta(2)-isopentenylpyrophosphate transferase...   125   2e-29
30150.m000473 ATP binding protein, putative                            86   2e-17

>28153.m000272 ATP binding protein, putative
          Length = 328

 Score =  491 bits (1263), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 235/325 (72%), Positives = 264/325 (81%), Gaps = 2/325 (0%)

Query: 1   MRLSMSLRQATNPPSHVLDIPTGRLKMDIVTPRWQKSKVVILMGATGTGKSRLSLDLAMQ 60
           MRLSMS  Q T+   + LD+PTGRLKMDIVTPRWQK KVVI+MGATGTGKS+LSLDLA Q
Sbjct: 4   MRLSMSFCQQTHHHQNTLDVPTGRLKMDIVTPRWQKPKVVIVMGATGTGKSKLSLDLATQ 63

Query: 61  FPAEIINSDKMQVYKGLEVTTNKITEEESSGVPHHLLGVVNPNADFTAKDFCNMASLTIE 120
            PAEIINSDKMQ+YKGL++TTNKITEEE SG+PHHLLGVVNPN DFTAKDFCNMAS  I 
Sbjct: 64  CPAEIINSDKMQLYKGLDITTNKITEEEMSGIPHHLLGVVNPNVDFTAKDFCNMASQAIG 123

Query: 121 SISIRGLLPIIVGGSNSYIEALVDDPEFKFRSRYDCCFLWVDVSMLVLKEFLYKRVDEMV 180
           SIS RGLLPI+VGGSNSYIEALVDDP+++FRS+YDCCFLWVDV M  L+EFL KRVD+MV
Sbjct: 124 SISTRGLLPIVVGGSNSYIEALVDDPDYRFRSKYDCCFLWVDVPMHALQEFLLKRVDQMV 183

Query: 181 NKGMVDEVRNIFDPNADYSRGIRKSIGVPELDKHFRSELFLDEEESARVLQEAIREIKSN 240
            KGM++EVRNIFDP ADYS+GIRKSIGVPE DK+ ++E F DE   AR+LQ+AI E+K N
Sbjct: 184 KKGMIEEVRNIFDPRADYSKGIRKSIGVPEFDKYLKAEAFSDERNCARLLQQAISEVKHN 243

Query: 241 NYKLALRQVEKIRRLKNVKGWNIHRIDATEFF--RNKDDDEMWKTLVGRPSIAIVRRFLY 298
           N KLA RQ+EKI RLK VKGWNIHRIDATE F  R K  D+ WK LV RPSI IVR+FLY
Sbjct: 244 NCKLARRQLEKIHRLKYVKGWNIHRIDATEVFRKRGKKADDAWKKLVARPSIDIVRQFLY 303

Query: 299 XXXXXXXXXXXXXXXKDYIAQCLVS 323
                          KDY A+CLVS
Sbjct: 304 SANTAAKVPATAGTTKDYFAECLVS 328


>29844.m003302 ATP binding protein, putative
          Length = 314

 Score =  307 bits (786), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 154/268 (57%), Positives = 199/268 (74%), Gaps = 6/268 (2%)

Query: 35  QKSKVVILMGATGTGKSRLSLDLAMQFPAEIINSDKMQVYKGLEVTTNKITEEESSGVPH 94
           +K K+V ++G TGTGKSRL++D+A + PAE++N DKMQVYKGL++ TNK+TEEE  GVPH
Sbjct: 21  RKDKLVFVVGPTGTGKSRLAIDIATRIPAEVVNCDKMQVYKGLDIVTNKVTEEECRGVPH 80

Query: 95  HLLGVVNPNADFTAKDFCNMASLTIESISIRGLLPIIVGGSNSYIEALV-DDPEFKFRSR 153
           HLLGVV P+ DFT+ DF   AS  ++ I  R  LPII GGSNS+IEAL  DDP+  FR R
Sbjct: 81  HLLGVVEPDDDFTSDDFRLHASNALDLIRARDRLPIIAGGSNSFIEALANDDPQ--FRLR 138

Query: 154 YDCCFLWVDVSMLVLKEFLYKRVDEMVNKGMVDEVRNIFDP-NADYSRGIRKSIGVPELD 212
           Y+CCFLWVDVS+ VL  F+ +RVD MV  G++DEVRNIFDP N +YSRGI+++IGVPELD
Sbjct: 139 YECCFLWVDVSLPVLYSFVSERVDRMVKAGLIDEVRNIFDPINTNYSRGIKRAIGVPELD 198

Query: 213 KHFRSELFLDEEESARVLQEAIREIKSNNYKLALRQVEKIRRLKNVKGWNIHRIDATE-F 271
           + FR E  +D +   ++L  +I +IK N   LA RQ++KI RL N   WN+HRIDATE F
Sbjct: 199 QFFRYEDIVDAKTRGKLLDTSIAKIKENTCTLACRQLQKIHRLHNRWSWNMHRIDATEVF 258

Query: 272 FRNKDD-DEMWKTLVGRPSIAIVRRFLY 298
            RN ++ +E W+ LV  PS  IV +F+Y
Sbjct: 259 IRNGEEAEEAWEKLVAGPSAMIVEQFIY 286


>29851.m002444 tRNA delta(2)-isopentenylpyrophosphate transferase,
           putative
          Length = 338

 Score =  268 bits (684), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 136/280 (48%), Positives = 189/280 (67%), Gaps = 9/280 (3%)

Query: 22  TGRLKMDIVTPRWQKSKVVILMGATGTGKSRLSLDLAMQFPAEIINSDKMQVYKGLEVTT 81
           TGR++  +      K K V ++GAT TGKS+LS+DLA  F AEIINSDK+QVYKGL++ T
Sbjct: 62  TGRVENQV-----NKKKTVFILGATATGKSKLSVDLASHFDAEIINSDKIQVYKGLDIVT 116

Query: 82  NKITEEESSGVPHHLLGVVNPNADFTAKDFCNMASLTIESIS-IRGLLPIIVGGSNSYIE 140
           NKI E+   G+PHHLLG ++P ADFTA+DFCN     +  I+   G +PIIVGGSN++I 
Sbjct: 117 NKIPEDNRKGIPHHLLGFMDPEADFTAQDFCNHVCKAMTHITEYNGRVPIIVGGSNNFIR 176

Query: 141 ALVDDPEFKFRSRYDCCFLWVDVSMLVLKEFLYKRVDEMVNKGMVDEVRNIFDPNADYSR 200
           ALV+DP   F++ YD CFLW+DV++ VL + + KRVD+MV  G+VDEVR      +DY+R
Sbjct: 177 ALVEDPHSSFKANYDSCFLWMDVALPVLYKHVGKRVDQMVKAGLVDEVRETAVSGSDYTR 236

Query: 201 GIRKSIGVPELDKHFRSELFLDEEESAR-VLQEAIREIKSNNYKLALRQVEKIRRLKNVK 259
           G+ ++IG+PE+ + + +E  + +E + + +L  AI  IK N  +L   Q+ KI R+ +  
Sbjct: 237 GVWRAIGLPEMHEFYYAEKTMSDENTKKMLLDAAIDRIKENTCRLVDAQLGKIDRMIHEL 296

Query: 260 GWNIHRIDATEFFRNKDDD--EMWKTLVGRPSIAIVRRFL 297
           GW IHRIDAT      +D+  E W  +V +PSI IVR FL
Sbjct: 297 GWKIHRIDATCVVEKSEDEAVEAWNKVVLKPSIEIVRGFL 336


>29851.m002452 ATP binding protein, putative
          Length = 290

 Score =  263 bits (673), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 131/268 (48%), Positives = 184/268 (68%), Gaps = 6/268 (2%)

Query: 35  QKSKVVILMGATGTGKSRLSLDLAMQFPAEIINSDKMQVYKGLEVTTNKITEEESSGVPH 94
           +K KVV ++GATGTGK++LS+DLA  + AEIINSDK+QVY GL++ TNK TE E  G+PH
Sbjct: 19  KKKKVVFILGATGTGKTKLSIDLATHYKAEIINSDKIQVYHGLDIVTNKATEAERKGIPH 78

Query: 95  HLLGVV-NPNADFTAKDFCNMASLTIES-ISIRGLLPIIVGGSNSYIEALVDDPEFKFRS 152
           HLLG + +P ADFT +DFC      I   I+  G  PI+VGGSN+YI+ALV+D E  F+ 
Sbjct: 79  HLLGFLQDPEADFTIRDFCIQVHRAINHIINDNGCTPIVVGGSNTYIKALVEDDE-SFKG 137

Query: 153 RYDCCFLWVDVSMLVLKEFLYKRVDEMVNKGMVDEVRNIFDPNADYSRGIRKSIGVPELD 212
            +D CFLW+DV + VL + + KR+D+MV+ G+VDE+R  F P  DYS+G+ ++IGVPE++
Sbjct: 138 EFDACFLWMDVELSVLYKRVSKRIDQMVDAGLVDEIRGFFAPGIDYSKGVWRAIGVPEME 197

Query: 213 KHFRSELFLDEEESARVLQE-AIREIKSNNYKLALRQVEKIRRLKNVKGWNIHRIDATEF 271
           K+F +E  + +E + R+L + AI+E K N  KL   Q+ KI   +   GW +HR++AT  
Sbjct: 198 KYFLAEKNMADETTKRILLDAAIQETKENTCKLVNSQIAKINMFRKKLGWKLHRLNATSV 257

Query: 272 FRNK--DDDEMWKTLVGRPSIAIVRRFL 297
           F     + D+ WK +V  PS+ IV  FL
Sbjct: 258 FEKAGIEADDAWKKMVLNPSLKIVGDFL 285


>30066.m000705 adenylate dimethylallyltransferase, putative
          Length = 332

 Score =  233 bits (595), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 134/290 (46%), Positives = 187/290 (64%), Gaps = 30/290 (10%)

Query: 32  PRWQKSKVVILMGATGTGKSRLSLDLAMQFPAEIINSDKMQVYKGLEVTTNKITEEESSG 91
           P+ QK K+V++MGATG GK+RLS+DLA +F +EIIN+DKMQVYKGL++TTNKIT ++  G
Sbjct: 47  PKQQKDKIVVIMGATGCGKTRLSIDLATRFQSEIINTDKMQVYKGLDITTNKITLQDRLG 106

Query: 92  VPHHLLGVVNP-NADFTAKDFCNMASLTIESISIRGLLPIIVGGSNSYIEALVDD---PE 147
           VPHHLLG V+P N +F+  DF   A L+I  I  R  LP++VGGSNSYI AL+ D   PE
Sbjct: 107 VPHHLLGEVDPDNCEFSPSDFRLHAGLSISDIVSRQKLPLLVGGSNSYIHALLVDRFNPE 166

Query: 148 FKF------------RSRYDCCFLWVDVSMLVLKEFLYKRVDEMVNKGMVDEVRNIFDP- 194
                          + RYDCCF+WVDVS+ +L ++L KRVDEM++ GM +E+   +   
Sbjct: 167 INVFQQSKNSESVSTQLRYDCCFIWVDVSLPLLCDYLCKRVDEMLDSGMFEELSEYYASV 226

Query: 195 NADYSRGIRKSIGVPELDKHFRSELFLDEEESAR-------VLQEAIREIKSNNYKLALR 247
           N +   G+RK+IGVPE D++F+   +    +  +       V +EA+R IK N  +LA R
Sbjct: 227 NPESQPGLRKAIGVPEFDRYFKK--YPPGYQGGKWDFVQRGVYEEAVRMIKENTCQLAKR 284

Query: 248 QVEKIRRLKNVKGWNIHRIDATEFFRNKDDDEMWKTLVGRPSIAIVRRFL 297
           Q+ KI RLK+  GW++HR    +  +     E+W+  V +PS+ IV  FL
Sbjct: 285 QMGKILRLKSA-GWDLHRKKRKKKKKWM---EIWERDVLKPSMKIVNHFL 330


>29791.m000555 tRNA delta(2)-isopentenylpyrophosphate transferase,
           putative
          Length = 453

 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 75/101 (74%)

Query: 43  MGATGTGKSRLSLDLAMQFPAEIINSDKMQVYKGLEVTTNKITEEESSGVPHHLLGVVNP 102
           MG TG+GKS+L++DLA  FP EIIN+D MQVY GL+V TNK+   +  GVPHHLLG ++P
Sbjct: 1   MGPTGSGKSKLAIDLATHFPVEIINADSMQVYHGLDVLTNKVPLYDQKGVPHHLLGTISP 60

Query: 103 NADFTAKDFCNMASLTIESISIRGLLPIIVGGSNSYIEALV 143
           N +FTAK+F + A   I+ I  R   P+IVGG+N YI+ALV
Sbjct: 61  NVEFTAKEFRDSAIPLIKDILSRNCFPVIVGGTNYYIQALV 101



 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 96/181 (53%), Gaps = 37/181 (20%)

Query: 153 RYDCCFLWVDVSMLVLKEFLYKRVDEMVNKGMVDEVRNIFDPNADYSRGIRKSIGVPELD 212
           R+DCCF+ VD +  VL +++ +RVD M++ G++ EV +I++P ADY+RG++++IGV E +
Sbjct: 197 RFDCCFICVDAATPVLDQYVGQRVDCMIDAGLLCEVYDIYNPYADYTRGLQQAIGVREFE 256

Query: 213 KHFRS----------------ELFL--------------------DEEESARVLQEAIRE 236
              R+                 LFL                    D+ E   +L EAI +
Sbjct: 257 DVLRAYLSDNRNDEANDSTDKSLFLVSTNNDKMLKNNMREILRSSDDNEVKVLLTEAIDK 316

Query: 237 IKSNNYKLALRQVEKIRRLKNVKGWNIHRIDATEFFRNKDDDEMWKTLVGRPSIAIVRRF 296
           +K N  +L  RQ  +I RL  + GWNIH +DATE    K  DE W   V  P++ I+R F
Sbjct: 317 VKLNTRRLVRRQKRRITRLNTLFGWNIHYVDATESISCK-SDESWAAHVVEPAVEIIRSF 375

Query: 297 L 297
           L
Sbjct: 376 L 376


>30150.m000473 ATP binding protein, putative
          Length = 446

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 66/109 (60%)

Query: 35  QKSKVVILMGATGTGKSRLSLDLAMQFPAEIINSDKMQVYKGLEVTTNKITEEESSGVPH 94
           ++ KV+++ G TG GKSRL+L+LA +   EII++D +QVY+GL+V + K +  E   V H
Sbjct: 39  KREKVLVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSPTERKEVRH 98

Query: 95  HLLGVVNPNADFTAKDFCNMASLTIESISIRGLLPIIVGGSNSYIEALV 143
           HL+ V +P+ D++   F   A      I   G +PI+ GG+  Y+   V
Sbjct: 99  HLIDVSHPSEDYSVGKFFEDARQATRDILDNGRVPIVAGGTGLYLRWFV 147