Jatropha Genome Database

JcCA0315581.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0315581.20 - phase: 0 
         (270 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006173 conserved hypothetical protein                          362   e-100
29908.m006238 conserved hypothetical protein                           53   2e-07

>29908.m006173 conserved hypothetical protein
          Length = 269

 Score =  362 bits (929), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/270 (67%), Positives = 202/270 (74%), Gaps = 1/270 (0%)

Query: 1   MGGHRAIEAAKTVIEVADVAWKAMEFTXXXXXXXXXXXXXXITHASIDEELESLRSENRC 60
           M GH AIEAAKTVIEVADVAWKAMEFT                H SIDEELESLRSENR 
Sbjct: 1   MKGHGAIEAAKTVIEVADVAWKAMEFTHHHQLHNGDHEDH-TKHVSIDEELESLRSENRR 59

Query: 61  XXXXXXXXXXXXXXXXXXPCLLNDCPPDLHARLVATVDSEDFLARLKSLQLASANISGIE 120
                              CLLNDCPPDL+ RLVATVDSE+F+ RLKSLQ ASAN + IE
Sbjct: 60  LKNQLEQNLKLLQNLSESSCLLNDCPPDLYTRLVATVDSENFMERLKSLQQASANKTSIE 119

Query: 121 FPFKEATGDDMHSAEMLINVSNEEPSWWVWVTEEMAPNNIEERSRIDNENYXXXXXXXXX 180
           FPFKE +G+D+HSAE+LINVS+EEPSWWVWVT+EM P+N+EERS ID+ENY         
Sbjct: 120 FPFKEPSGNDIHSAEILINVSHEEPSWWVWVTDEMVPSNVEERSGIDDENYVVVTEEHVV 179

Query: 181 XXXXNFMAKCILSNPKAQKMTPEELQKSLEKALEGVSKWEKILNIWHAGQLFYTLATWGL 240
               NFMAKCILSNPKAQ M PEELQK L KALEGVSK EK+L+IWHAGQLFYTLATWGL
Sbjct: 180 EGVANFMAKCILSNPKAQDMAPEELQKILAKALEGVSKLEKVLDIWHAGQLFYTLATWGL 239

Query: 241 ALWGLYRTRSILKLAAKGVHKTSKVVLKAL 270
           ALWGLYR+R++LKLAAKGVH TSK VL+ L
Sbjct: 240 ALWGLYRSRAVLKLAAKGVHTTSKAVLRVL 269


>29908.m006238 conserved hypothetical protein
          Length = 243

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 6/130 (4%)

Query: 143 EEPSWWVWVTEEMAPNNIEERSRIDN--ENYXXXXXXXXXXXXXNFMAKCILSNPKAQKM 200
           EE S W  V E    N++ E   +D+  E+Y              FMA  +LS  + + +
Sbjct: 118 EEGSSWDMVNE----NDLWEFENVDSDQEDYVLVRQEDIVEGIACFMAAYLLSVKQTKDL 173

Query: 201 TPEELQKSLEKALEGVSKWEKILNIWHAGQLFYTLATWGLALWGLYRTRSILKLAAKGVH 260
           TP +LQ++L K      K  K+   W   ++ Y +A+WG    G+Y+   IL+ A+K   
Sbjct: 174 TPNQLQEALSKTFSVKKKKGKLRKAWDGSKVIYNVASWGATAIGIYQNPVILRAASKAFW 233

Query: 261 KTSKVVLKAL 270
            +  V+ K L
Sbjct: 234 TSCHVISKLL 243