Jatropha Genome Database

JcCA0315091.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0315091.30 + phase: 0 /partial
         (188 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27647.m000175 aspartate semialdehyde dehydrogenase, putative          355   5e-99

>27647.m000175 aspartate semialdehyde dehydrogenase, putative
          Length = 377

 Score =  355 bits (912), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 171/188 (90%), Positives = 174/188 (92%)

Query: 1   VQRMVVSTYQXXXXXXXXXMEELELQTREVLEGKPPTCNIFKQQYAFNLFSHNAPVLENG 60
           VQRMVVSTYQ         MEELELQTREVL+GKPPTC IFKQQYAFNLFSHNAPV  NG
Sbjct: 190 VQRMVVSTYQAASGAGAAAMEELELQTREVLQGKPPTCTIFKQQYAFNLFSHNAPVQSNG 249

Query: 61  YNEEEMKLVKETRKIWNDMNVKVTATCIRVPVMRAHAESVNLQFEKPLDEDTARAILKNA 120
           YNEEEMKLVKETRKIWNDMNVKVTATCIRVPVMRAHAESVNLQFEKPLDEDTAR ILKNA
Sbjct: 250 YNEEEMKLVKETRKIWNDMNVKVTATCIRVPVMRAHAESVNLQFEKPLDEDTARDILKNA 309

Query: 121 AGVVVIDDRASNHFPTPLEVSNKDDVAVGRIRRDVSQEGNHGLDIFVCGDQIRKGAALNA 180
            GVVVID+RASNHFPTPLEVSNKDDVAVGRIR+DVSQEGNHGLDIFVCGDQIRKGAALNA
Sbjct: 310 PGVVVIDNRASNHFPTPLEVSNKDDVAVGRIRQDVSQEGNHGLDIFVCGDQIRKGAALNA 369

Query: 181 IQIAELLL 188
           IQIAELLL
Sbjct: 370 IQIAELLL 377