Jatropha Genome Database

JcCA0314481.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0314481.20 - phase: 1 /partial
         (505 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29739.m003668 aminoadipic semialdehyde synthase, putative             806   0.0  

>29739.m003668 aminoadipic semialdehyde synthase, putative
          Length = 1050

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/508 (77%), Positives = 431/508 (84%), Gaps = 4/508 (0%)

Query: 2    VNKEANKISLKVGKIQENDVKKDCDTKRKTGVLIIGAGRVCRPAVEFLASIGSISSHECY 61
            ++KEANK  LKVGK+QEN  +KDCDTKRK  VLIIGAG VCRPA EFLASIG+ISS E Y
Sbjct: 543  LDKEANKFFLKVGKVQENGSRKDCDTKRKASVLIIGAGHVCRPAAEFLASIGNISSREWY 602

Query: 62   KACLDTDFEEQNDVQVFVASLYLKDAEEIIEGIPNATAVQLDVMDNESLCKYISQAEVVV 121
            KACLDTDFEEQNDVQV VASLYLKDAEEII+GIPNATAVQLDVMD+E LCKYISQ EVVV
Sbjct: 603  KACLDTDFEEQNDVQVIVASLYLKDAEEIIDGIPNATAVQLDVMDHERLCKYISQVEVVV 662

Query: 122  SLLPPSCHIIIANACIKLSKHLVTASYIDDSMSALDEKAKAADITILGEMGMDPGIDHMM 181
            SLLPPSCHI+IANACIKL+KHLVTASY+DDSMSALDEKAKAADITILGEMG+DPGIDHMM
Sbjct: 663  SLLPPSCHIVIANACIKLNKHLVTASYVDDSMSALDEKAKAADITILGEMGLDPGIDHMM 722

Query: 182  AMKMINQAHVRKGRLKSFTSYCGXXXXXXXXXXXXXYKFSWSPAGVIRAGRNPATYRLNG 241
            AMKMINQAHVRKGR+KSFTSYCG             YKFSW+PAG IRAGRNPATY  +G
Sbjct: 723  AMKMINQAHVRKGRVKSFTSYCGALPSPAAANNPLAYKFSWNPAGAIRAGRNPATYMSHG 782

Query: 242  EIVHIDGDSLYDSAFKLRIPHLPAFALECLPNRDSLVYEKVYGIEEASTIFRGTLRYEGF 301
            EIV+++GD+LYDSA KLR+P LPAFALECLPNR+SLVY KVYGIEEASTIFRGT+RYEGF
Sbjct: 783  EIVNVEGDNLYDSAVKLRLPDLPAFALECLPNRNSLVYGKVYGIEEASTIFRGTIRYEGF 842

Query: 302  GEIMGILARIGFFRTEPHPVLRCERRPTFKTFLCELLKIPGE----NLSGEKDITENIVT 357
            GEIMG LA+IG F TE H  LRC++R TF+ FLCELL I GE     L GE+DITE +VT
Sbjct: 843  GEIMGTLAKIGLFSTESHSYLRCKQRTTFQGFLCELLDIHGEITDGVLLGEEDITEKLVT 902

Query: 358  LGHCXXXXXXXXXXXXIIFLGFDEQTEIPASCRSAFDVTCYRMEERLVYSSTEQDMVLLH 417
            LGHC            II+LG  EQTEIPASC+S FDVTC+RMEERL YSS EQDMVLLH
Sbjct: 903  LGHCKEKETAVKAAKTIIYLGLHEQTEIPASCKSPFDVTCFRMEERLTYSSAEQDMVLLH 962

Query: 418  HEIVVEFPDGQRPERHSATLLEFGTSKNGKTVTAMALTVGIPAAIGAXXXXENKIKSRGV 477
            HE+ VEFPDG+R E H  TLLEFGT+K GKT+TAMALTVGIPAAIGA    ENKIK++GV
Sbjct: 963  HEVEVEFPDGKRTEYHRGTLLEFGTTKKGKTITAMALTVGIPAAIGALLLLENKIKTKGV 1022

Query: 478  LRPTEPEVYMPALEILQAHGIKLIEKVE 505
            +RP EPEVY+PAL+ILQAHGIKLIEKVE
Sbjct: 1023 VRPIEPEVYVPALDILQAHGIKLIEKVE 1050