Jatropha Genome Database

JcCA0314231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0314231.10 + phase: 0 /pseudo/partial
         (300 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29864.m001459 polyamine oxidase, putative                             510   e-145
30147.m013966 polyamine oxidase, putative                             218   2e-57
29634.m002143 amine oxidase, putative                                  80   9e-16
29769.m000451 amine oxidase, putative                                  74   1e-13
30091.m000234 Flavin-containing amine oxidase domain-containing ...    60   1e-09
30170.m014140 lysine-specific histone demethylase, putative            59   3e-09
29080.m000176 Flavin-containing amine oxidase domain-containing ...    57   8e-09
29912.m005326 conserved hypothetical protein                           51   6e-07

>29864.m001459 polyamine oxidase, putative
          Length = 493

 Score =  510 bits (1314), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 253/300 (84%), Positives = 262/300 (87%)

Query: 1   MDSPSRXXXXXXXXXXXXXXXXKVLAENGIEDMVILEASDRIGGRIRKENFGGVSVELGA 60
           MDSP                  KVLAENGIED+VILEASDRIGGRI+KE+FGGVSVELGA
Sbjct: 1   MDSPPLSSVIVIGAGISGLSAAKVLAENGIEDVVILEASDRIGGRIKKESFGGVSVELGA 60

Query: 61  GWIAGVGGKESNPVWELANQSGLRTCFSDYSNARYNIYDRSGKIFPSGVAADSYKKAVDS 120
           GWIAGVGGKESNPVWELANQSGLRTCFSDYSNARYNIYDRSGKIFPSGVAADSYKKAVDS
Sbjct: 61  GWIAGVGGKESNPVWELANQSGLRTCFSDYSNARYNIYDRSGKIFPSGVAADSYKKAVDS 120

Query: 121 AIMKLRSQEANHACEVIEPPCSPKTPIELAIDFILHDFEMAEVEPISTYVDLGEREFLVA 180
           AIMKLRSQEAN   EVIEPPCSPKTPIELAIDFILHDFEMAEVEPISTYVD GEREFLVA
Sbjct: 121 AIMKLRSQEANLVGEVIEPPCSPKTPIELAIDFILHDFEMAEVEPISTYVDFGEREFLVA 180

Query: 181 DERGYECLLYKMAEDFLFTSEGKILDNRLKLNKVVREIHHSRNGVIVETEDGCVYEASYV 240
           DERGYE LLYK+AEDFLFTSEGKILD RLKLNKVVREI HSRNGV V+TEDGC+YEA+YV
Sbjct: 181 DERGYEYLLYKIAEDFLFTSEGKILDTRLKLNKVVREIQHSRNGVTVKTEDGCIYEANYV 240

Query: 241 ILSVSIGVLQSDLISFRPPLPKWKTEAIGRCDVMVYTKIFLKFPYKFLAVXSXKGVLIYA 300
           ILS SIGVLQSDLISFRPPLP WKTEAI +CDVMVYTKIF+KFPYKF      K   IYA
Sbjct: 241 ILSASIGVLQSDLISFRPPLPSWKTEAIEKCDVMVYTKIFIKFPYKFWPCCPEKEFFIYA 300


>30147.m013966 polyamine oxidase, putative
          Length = 483

 Score =  218 bits (556), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/294 (44%), Positives = 174/294 (59%), Gaps = 42/294 (14%)

Query: 23  KVLAENGIEDMVILEASDRIGGRIRKENFGGVSVELGAGWIAGVGGKESNPVWELANQSG 82
           K L E GI+D++ILEA+ RIGGR+ K  F G +VE+G  W+   GG  +NP+ ++A +  
Sbjct: 43  KTLHEAGIQDILILEATPRIGGRLMKTQFSGYTVEMGCNWLF-TGGPVANPLIDMAKKLK 101

Query: 83  LRTCFSDYSNARYNIYDRSGKIFP-------SGVAA-------------DSYKKAVDSAI 122
           LRT +SD+ N   N Y + G ++P       SGVA               + KK VD +I
Sbjct: 102 LRTFYSDFENITSNTYKQEGGLYPKKQVEEVSGVATARDDFCVKFSQKLSAKKKDVDVSI 161

Query: 123 MKLRSQEANHACEVIEPPCSPKTPIELAIDFILHDFEMAE---------VEPISTYVDLG 173
           +         A + I     P +P+E+ IDF  +DFE AE           P +  VD G
Sbjct: 162 L---------AAQRIYNKRPPTSPLEMVIDFFYNDFEDAEPPKVTSLKHTYPRNEMVDHG 212

Query: 174 EREFLVADERGYECLLYKMAEDFLFTSEGKILDNRLKLNKVVREIHHSRNGVIVETEDGC 233
           E E+ VAD RG E L+  +A+ FL +S  K  D RLKLNKVVR+I +S +GVI++TEDG 
Sbjct: 213 EDEYFVADPRGVEVLVQYLAKQFL-SSVTK--DPRLKLNKVVRDISYSDSGVIIKTEDGS 269

Query: 234 VYEASYVILSVSIGVLQSDLISFRPPLPKWKTEAIGRCDVMVYTKIFLKFPYKF 287
            Y + YVI+SVS+GVLQSDLI F+P LP WK  AI    + +YTKIF+KFPYKF
Sbjct: 270 TYNSKYVIVSVSLGVLQSDLIEFQPKLPVWKRIAISDFSMTIYTKIFMKFPYKF 323


>29634.m002143 amine oxidase, putative
          Length = 491

 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 127/282 (45%), Gaps = 43/282 (15%)

Query: 33  MVILEASDRIGGRIRKENFGGVSVELGAGWIAGVGGKESNPVWELANQSGL--------R 84
           +V+LE+ DR+GGR+      G  V+LGA W+ GVG +  NP+  L  + GL         
Sbjct: 54  VVLLESRDRLGGRVHTNYSFGFPVDLGASWLHGVGPE--NPLAPLIGRLGLPLYRTSGDN 111

Query: 85  TCFSDYSNARYNIYDRSGKIFPSGVAADSYK--KAVDSAIMKLRSQEA-----NHACEVI 137
           +   D+    Y ++D  G   P  + ++  +  + +     K+R + +     ++A  ++
Sbjct: 112 SVLYDHDLESYALFDMDGNQVPQELVSEVGETFEIILKETEKVRQEYSEDMSISNAFSIV 171

Query: 138 ---EPPCSPKTPIELAIDFILHDFE---MAEVEPISTYVDLGEREFLVADE----RGYEC 187
               P    +      + + L   E    A+ + IS      + E L        RGY  
Sbjct: 172 FERRPELRLEGLAHKVLQWYLCRMEGWFAADADTISLKC-WDQEELLPGGHGLMVRGYLP 230

Query: 188 LLYKMAEDFLFTSEGKILDNRL--KLNKVVREIHHSRNGVIVETEDGCVYEASYVILSVS 245
           ++  +A         K LD RL  ++ K+VR      NGV V TEDG  + A   +++V 
Sbjct: 231 VINTLA---------KGLDIRLGHRVTKIVRR----HNGVKVTTEDGRTFMADAAVIAVP 277

Query: 246 IGVLQSDLISFRPPLPKWKTEAIGRCDVMVYTKIFLKFPYKF 287
           +GVL+S  I+F P LP WK EAI    V +  KI L F   F
Sbjct: 278 LGVLKSRTITFEPRLPDWKEEAIKDLGVGIENKIVLHFDKVF 319


>29769.m000451 amine oxidase, putative
          Length = 498

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 119/284 (41%), Gaps = 44/284 (15%)

Query: 33  MVILEASDRIGGRIRKENFGGVSVELGAGWIAGVGGKESNPV--------WELANQSGLR 84
           +++LE+ DR+GGRI  +   G  V+LGA W+ GV  +  NP+          L   SG  
Sbjct: 56  VILLESRDRLGGRIHTDYSFGYPVDLGASWLHGVCNE--NPLAPLIRSLRLTLYKTSGDN 113

Query: 85  TCFSDYSNARYNIYDRSGKIFPSGVA---ADSYKKAVDSAIMKLRSQEANHACEVIEPPC 141
           +   D+      ++D +G   P  +     D +K+     I+K          E I    
Sbjct: 114 SVLYDHDLESCTLFDMNGHQVPKELVIEVGDIFKR-----ILK--------ETERIRDEH 160

Query: 142 SPKTPIELAIDFILHDFEMAEVEPIST-----YVDLGEREFLV-ADERGYECLLYKMAED 195
                I  AI  +L        E I+      Y+   E  F V AD    +       E+
Sbjct: 161 PDDMSILQAIKLVLDRHSELRQEGIANEVFQWYICRMEAWFAVDADMISLKMWDQASEEN 220

Query: 196 FLFTSEGKIL------------DNRLKLNKVVREIHHSRNGVIVETEDGCVYEASYVILS 243
            L    G ++            D  ++LN  V +I ++ N  +V  EDG  + A  VI++
Sbjct: 221 VLCGGHGLMVQGYDPIIKALAKDIDIRLNHKVTKICNALNKAMVVVEDGRNFIADAVIVT 280

Query: 244 VSIGVLQSDLISFRPPLPKWKTEAIGRCDVMVYTKIFLKFPYKF 287
           V +G+L+++LI F P LP WK  AI    V    KI L+F   F
Sbjct: 281 VPLGILKANLIQFEPKLPDWKVAAISDLGVGSENKIALQFDEVF 324


>30091.m000234 Flavin-containing amine oxidase domain-containing
           protein, putative
          Length = 793

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 114/280 (40%), Gaps = 42/280 (15%)

Query: 33  MVILEASDRIGGRIRKENFGG----VSVELGAGWIAGVGGKESNPVWELANQSGLRTCFS 88
           +V+LE   R GGR++     G     + +LG   + G+ G   NP+  LA Q  L     
Sbjct: 252 VVVLEGRARAGGRVKTMKMKGDGVVAAADLGGSVLTGING---NPLGVLARQLSL----- 303

Query: 89  DYSNARYNIYDRSGKIFPSGVAADSYKKAVDSAIMKLRSQEANHACEV----IEPPCSPK 144
                 + + D      P G A D   K +DS++    ++  +  C++    IE   S  
Sbjct: 304 ----PLHKVRDICPLYLPDGKAVD---KEIDSSVEVSFNKLLDRVCKLRQAMIEEVKSVD 356

Query: 145 TPIELAIDFILHDFEMAEVEPISTYV---DLGEREFLVADERGYECLLY-------KMAE 194
             +  A++   H  ++AE +PI   +    L   E+  A       + Y       +M  
Sbjct: 357 VNLGTALEAFRHAHKVAE-DPIERMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGG 415

Query: 195 DFLFTSEGK-------ILDNRLKLNKVVREIHHSRNGVIVETEDGCVYEASYVILSVSIG 247
           D  F   G          D  +   + V  I +  +G+IV    G  +    V+ +V +G
Sbjct: 416 DHCFIPGGNDTFVRELAKDLPIFYERTVESIRYGVDGIIVYAS-GQEFHGDMVLCTVPLG 474

Query: 248 VLQSDLISFRPPLPKWKTEAIGRCDVMVYTKIFLKFPYKF 287
           VL+   I F P LP+ K +AI R    +  K+ L FPY F
Sbjct: 475 VLKKGSIEFFPELPQRKKDAIQRLGYGLLNKVALLFPYNF 514


>30170.m014140 lysine-specific histone demethylase, putative
          Length = 1947

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 10/90 (11%)

Query: 208  RLKLNKVVREIHHS----------RNGVIVETEDGCVYEASYVILSVSIGVLQSDLISFR 257
            R+ LN +V +I +S           N V + T +G  +    V+++V +G L+++ I F 
Sbjct: 1147 RIHLNHIVTDISYSTKETGLSESQNNKVKISTSNGSEFLGDAVLITVPLGCLKAEGIKFN 1206

Query: 258  PPLPKWKTEAIGRCDVMVYTKIFLKFPYKF 287
            PPLP+WK  +I R    V  K+ L+FP  F
Sbjct: 1207 PPLPQWKCSSIQRLGFGVLNKVVLEFPEVF 1236


>29080.m000176 Flavin-containing amine oxidase domain-containing
           protein, putative
          Length = 750

 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 114/280 (40%), Gaps = 44/280 (15%)

Query: 33  MVILEASDRIGGRIRKENFGG----VSVELGAGWIAGVGGKESNPVWELANQSGLRTCFS 88
           +V+LE  +R GGR+  +  G      +V+LG   I G+    +NP+  LA Q        
Sbjct: 186 VVVLEGRNRPGGRVYTQKMGKKGQFAAVDLGGSVITGM---HANPLGVLARQ-------- 234

Query: 89  DYSNARYNIYDRSGKIFPSGVAADS---------YKKAVDSAIMKLRSQEANHACE---- 135
             S   + + D      P G   D          + K +D  +M+LR        +    
Sbjct: 235 -LSIPLHKVRDNCPLYKPDGAPVDKEVDYKIEFIFNKLLDK-VMELRQIMGGFGNDISLG 292

Query: 136 -VIEPPCSPKTPIELAIDFILHDFEMAEVEPISTYVDLGEREFLVADERGYECLLYKMAE 194
            V+E      T      +  L D+ +A +E    Y + G    L A     +   Y+M  
Sbjct: 293 AVLERLSQLYTVARTIEERQLLDWHLANLE----YANAGCLSDLSATYWDQDDP-YEMGG 347

Query: 195 DFLFTSEGKI-LDNRLK------LNKVVREIHHSRNGVIVETEDGCVYEASYVILSVSIG 247
           D  F + G   L N L         K V  I +   GV+V    G V+EA  V+ +V +G
Sbjct: 348 DHCFLAGGNWRLINALSEGVPIFYGKTVNTIKYGNEGVMV-IAGGQVFEADIVLCTVPLG 406

Query: 248 VLQSDLISFRPPLPKWKTEAIGRCDVMVYTKIFLKFPYKF 287
           VL+   I+F P LP+ K  AI R    +  K+ + FP+ F
Sbjct: 407 VLKKKTINFDPELPRRKLAAIDRLGFGLLNKVAMVFPHVF 446


>29912.m005326 conserved hypothetical protein
          Length = 576

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 220 HSRNGVIVETEDGCVYEASYVILSVSIGVLQS----DLISFRPPLPKWKTEAIGRCDVMV 275
           H    V +   DG V  A +VI++ S+GVL++    D   F PPLP +KTEAI R    V
Sbjct: 291 HGHKPVQLHFNDGSVMCADHVIVTFSLGVLKAGIGQDSGMFSPPLPSFKTEAISRLGYGV 350

Query: 276 YTKIFLKFPYKFLAV 290
             K+FL+   K  AV
Sbjct: 351 VNKLFLQLSPKNDAV 365



 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 11/102 (10%)

Query: 32  DMVILEASDRIGGRIRKENFGGVSVELGAGWIAGVGGKESNPVWELANQ-SGLRT----- 85
           ++ ++E   RIGGRI    FGG  +E+GA WI G+GG   +PV ++A + + L +     
Sbjct: 36  ELCVVEGGTRIGGRINTSEFGGDRIEMGATWIHGIGG---SPVHKIAQEINSLESKQPWE 92

Query: 86  CFSDYSNARYNIYDRSGKIFPSGVAADS--YKKAVDSAIMKL 125
           C   + N    I +   ++ PS V + S  +K  +D A  KL
Sbjct: 93  CMDGFWNEPKTIAEGGFELNPSLVESISTLFKNLMDFAQGKL 134