Jatropha Genome Database

JcCA0314171.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0314171.20 + phase: 0 
         (306 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28455.m000372 lipoate-protein ligase B, putative                      438   e-123
29673.m000923 lipoate-protein ligase B, putative                      134   7e-32

>28455.m000372 lipoate-protein ligase B, putative
          Length = 303

 Score =  438 bits (1126), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 215/298 (72%), Positives = 244/298 (81%), Gaps = 16/298 (5%)

Query: 1   MIFAAAHSSFGFARIWPTNRYRPHSSEVVMLNQVPNQSASDFTSITRQHGKKCELFDLCK 60
           MI  +A  SFG     P NR+ P   +VV LN+V NQ ASD+        + CELFDLCK
Sbjct: 1   MIVVSASPSFGLIPTRPANRHSPFWRKVVSLNRVSNQRASDW--------RACELFDLCK 52

Query: 61  TLVPYGDAWNWQKDIVKEKKAMIERNEEFPDTLIVLQHRPVYTLGTGSSVGYLNFDVKDA 120
            +VPYG+AW+WQK+IV+EKKA+IERNEE PDTLIVLQHRPVYTLG GSSVG+LNFDV DA
Sbjct: 53  EVVPYGNAWDWQKEIVREKKALIERNEECPDTLIVLQHRPVYTLGAGSSVGFLNFDVNDA 112

Query: 121 PFEVYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRALEEVVIRVLASTFSIEAS 180
           PFEVYR ERGGEVTYHGPGQ+VMYPIINLRNH+MDLHWYLR LEEVVIRVL+STFSI+AS
Sbjct: 113 PFEVYRIERGGEVTYHGPGQVVMYPIINLRNHKMDLHWYLRTLEEVVIRVLSSTFSIQAS 172

Query: 181 RVEGLTGVWVGDEKVAAIGIKVSQWITYHGLALNVTTDLTPFNWIVPCGIRNRKVGSIKG 240
           R+EGLTGVW GD+K+AAIG+KVS+WITYHGLALNVTTDL PFNWIVPCGIRNRKVGSIKG
Sbjct: 173 RIEGLTGVWAGDQKLAAIGVKVSRWITYHGLALNVTTDLEPFNWIVPCGIRNRKVGSIKG 232

Query: 241 LLLQQIDSCLYENG----DDPEFVDSHLIDTTYKSLVREFSDIFQLNIYHKTVSSLEF 294
            LLQ++ SC   NG    D P+  D  LID T KSL+REFS++FQL I HKT S +EF
Sbjct: 233 -LLQKVQSC---NGRHTIDMPQLDDLKLIDITCKSLIREFSEVFQLKICHKTTSDVEF 286


>29673.m000923 lipoate-protein ligase B, putative
          Length = 223

 Score =  134 bits (336), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 114/181 (62%), Gaps = 10/181 (5%)

Query: 63  VPYGDAWNWQKDIVKEKKAMIERNEEFPDTLIVLQHRPVYTLG---TGSSVGYLNFDVKD 119
           V Y +A   Q+ +V ++KA      + PDT++ LQH P YTLG   T  ++     +++ 
Sbjct: 15  VNYLEALKLQEKLVADRKA-----SKIPDTILSLQHPPTYTLGKRRTDHNLLIPTSELQK 69

Query: 120 APFEVYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRALEEVVIRVLASTFSIEA 179
              E++ T+RGG++TYHGP Q V+YPII+LR+  +    Y+  LE  +I  LA  + ++A
Sbjct: 70  IGAELHYTQRGGDITYHGPRQAVLYPIISLRDIGLGARNYVEKLESTMIE-LALLYGVKA 128

Query: 180 -SRVEGLTGVWVGDEKVAAIGIKVSQWITYHGLALNVTTDLTPFNWIVPCGIRNRKVGSI 238
            +  +G TGVWVGD K+ AIG+++S  IT HGLA N+  +L  F  IVPCGI +++V S+
Sbjct: 129 CAGQKGETGVWVGDRKIGAIGVRISSGITSHGLAFNIDPNLNYFKNIVPCGIVDKEVTSL 188

Query: 239 K 239
           +
Sbjct: 189 R 189