Jatropha Genome Database

JcCA0313321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0313321.10 + phase: 0 
         (433 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m009134 hypothetical protein                                    498   e-141
30138.m004008 hypothetical protein                                    150   1e-36
29630.m000796 zinc finger protein, putative                            81   1e-15
30174.m008817 conserved hypothetical protein                           54   1e-07

>30174.m009134 hypothetical protein
          Length = 519

 Score =  498 bits (1283), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 285/462 (61%), Positives = 326/462 (70%), Gaps = 47/462 (10%)

Query: 1   MEPNQKKKLFICKFCNKRYPCGKSLGGHIRIHLXXXXXXXXXXXXXXTDLEDE------- 53
           MEPN KKKLFICKFCNKRYPCGKSLGGHIRIHL              TD+E+E       
Sbjct: 1   MEPNAKKKLFICKFCNKRYPCGKSLGGHIRIHLNGNGNGYGNS----TDIEEEDMKLNTS 56

Query: 54  -SFVAANGSNSKRDSEL-------YRLRENPRKTRRFMADSSNSHFLQEKVCKACGKGFQ 105
            SF AAN SNSK++ EL       Y LRENP+KT+RFMADSS  + LQEKVCK CGKGFQ
Sbjct: 57  KSFAAANVSNSKQELELEAGARSGYGLRENPKKTKRFMADSSKGNLLQEKVCKECGKGFQ 116

Query: 106 SLKALCGHMACHSKNSFEDQSETTERLKDQVFDSQSDTET-SAPSKXXXXXXXXYKTIGV 164
           SLKALCGHMACHSKNSFEDQSETTE+LKDQVFDSQSDTET SAPSK        YK IGV
Sbjct: 117 SLKALCGHMACHSKNSFEDQSETTEKLKDQVFDSQSDTETSSAPSKRRRSKRMRYKAIGV 176

Query: 165 YXXX------XXXXXXDLEQEQEEVAMCLMMLSKDSGFKGCFSSIADSSDNNSVVLETKS 218
           Y               D+EQEQEEVA CLMMLSKDSGFKGCFSS+ADSSD NSVVLETK 
Sbjct: 177 YSSSLSLVNGSLSSASDVEQEQEEVAKCLMMLSKDSGFKGCFSSVADSSD-NSVVLETK- 234

Query: 219 SSSPELKIGIKKNGVNCVYNNGNAVLEMKKAKK-QVMSTENDQSENSDSGYFRNGPKKVE 277
           SSSP+L+I + KNGV+CVY NGN +LE+KKAK+ +VMS  N+ SENSDSGYF+NGPKKVE
Sbjct: 235 SSSPKLRISV-KNGVSCVY-NGNGILEIKKAKQHEVMSVGNEYSENSDSGYFKNGPKKVE 292

Query: 278 SEISVHGFVGNDKFKKHKVEFRSRFEEEDIDPELGKRLSGFRRIKKELGKDLVXXXXXXX 337
           S+ISVHGF G D+FKK K+EF SRF E+   PELGKRLS  RRIK ELGKDL+       
Sbjct: 293 SDISVHGFTGIDEFKKQKIEFGSRF-EDGFSPELGKRLSRVRRIKTELGKDLIEEDGYGE 351

Query: 338 XXXNEF----------NNLEFLSSNGSKIVKRPSVAVNRSSHKKSNGGCSDSIYESGENS 387
                F          N+ E LS+    I  +  + V R+ H+++N GCS+S+Y SGENS
Sbjct: 352 TDGASFKYDSRKRDKRNDPELLSN----IASKTCIGVQRTRHRRTN-GCSESVYGSGENS 406

Query: 388 INTDYVPSELHNSCKRIKSCNGKNPVEQKLSGNAEKKFGTKK 429
           I TD  PS L +  K+ +SCNGK  +EQKLSG+ EKK   +K
Sbjct: 407 IETDCAPSPLPSHNKKSQSCNGKTAIEQKLSGSVEKKLSLRK 448


>30138.m004008 hypothetical protein
          Length = 557

 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 156/487 (32%), Positives = 211/487 (43%), Gaps = 80/487 (16%)

Query: 1   MEPNQKKKLFICKFCNKRYPCGKSLGGHIRIHLXXXXXXXX-----------XXXXXXTD 49
           ME  Q+ K  +CKFC+K + CG+SLGGH+R H+                          +
Sbjct: 1   MEEEQELKQHVCKFCSKSFSCGRSLGGHMRSHMINDISAQADGTKLTKKKLPSLTNYNNN 60

Query: 50  LEDESFVAANGSNSKRDSELYRLRENPRKTRRFMAD--SSNSHFLQEKVCKACGKGFQSL 107
             D +    N +    D   Y LRENP+KT R +AD  SS    L +K CK CG+ FQS 
Sbjct: 61  GADNNNKNNNTTTISADITGYGLRENPKKTWRIVADHHSSEDTSLVDKSCKECGRVFQSW 120

Query: 108 KALCGHMACHSK------------NSFEDQ---SETTERLKDQVFDSQSDTETSAPSKXX 152
           KAL GHM CH              NS E++   S T+   +  V DSQSD ET+AP++  
Sbjct: 121 KALFGHMKCHPSLEKEKVKASNINNSLEEEQQDSWTSANNQKLVMDSQSDNETAAPNRRK 180

Query: 153 XXXXXXYKTIGVYXXXXXXXXXDL----------EQEQEEVAMCLMMLSKDSGFKGC-FS 201
                     G           ++          +QEQEEVAMCLMMLS+D G  G   +
Sbjct: 181 RSKRRTRYMGGTANSSSLSFANNINASSSVSEIDQQEQEEVAMCLMMLSRDVGQWGSGLN 240

Query: 202 SIADSSDNNSVVLETKSSSSPELKIGIKKNGVNCVYNNGNAVLEMK--------KAKKQV 253
           S+A+SSDN+SV LE  +  S        +N V     NG   L++K        K +   
Sbjct: 241 SVAESSDNSSVFLENNNLVS-------SRNEVKASVCNGTETLKVKNFGDKKNGKLEDDD 293

Query: 254 MSTENDQSENSDSGYFRNGPKKVESEISVHGFVGNDKFKKHKVEFRSRFEEEDIDPELGK 313
           +  E+ +SE S SG            IS  GF  NDK KK   +     E   +  ELGK
Sbjct: 294 LRVESRKSEFSVSG------------ISRKGFTKNDKVKKSPADDERAAENSAV--ELGK 339

Query: 314 RL-------SGFRRIKKELGKDLVXXXXXXXXXXNEFNNLEFLSSNGSKIVKR-PSVAVN 365
            L       S  R   K    D            N   +  F  +  +K+     ++  +
Sbjct: 340 NLSKETDMISSKRNSNKRKYDDSFHPELKSDYLKNSDRSSRFECTTCNKVFHSYQALGGH 399

Query: 366 RSSHKKSNGGCSDSIYESGENSINTDYVPSELHNSCKRIKSCNGKNPVEQ---KLSGNAE 422
           R+SHKK+  GC  S  +S ENSI T+  P    +S   IKS   +  V+Q   +    AE
Sbjct: 400 RASHKKTK-GCFASRSDSNENSIETELSPDPTADSKLIIKSIKNEISVDQLAIERDNKAE 458

Query: 423 KKFGTKK 429
             +G KK
Sbjct: 459 TSYGAKK 465


>29630.m000796 zinc finger protein, putative
          Length = 577

 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 110/256 (42%), Gaps = 55/256 (21%)

Query: 1   MEPNQKKKLFICKFCNKRYPCGKSLGGHIRIHLXXXXXXXXXXXXXXTDLEDESFVAANG 60
           ME ++KKK  +CK CNK +  G+ LGGH+R H                   +E  +  N 
Sbjct: 1   MEEDRKKKRHVCKLCNKSFLSGRILGGHMRTHRSRNSV-------------EEDVILENS 47

Query: 61  SNSKRDSELYRLRENPRKTRR--FMADSSNSHF-LQEKV--------------------- 96
           +    D   Y LRENP+K+ +  F+ D+ +S   +QE V                     
Sbjct: 48  NMG--DEGCYGLRENPKKSWKSSFLNDNDDSLLSVQESVECRVCGKQFESARSLHGHMRH 105

Query: 97  ----------CKACGKGFQSLKALCGHMACHS-KNSFEDQSETTERLKDQVFDSQSDTET 145
                     CK CGKGF+++++L GHM  HS KN   ++S T+    + V  +  + +T
Sbjct: 106 HSVEERNGVRCKECGKGFKTVRSLTGHMRLHSLKNRVSNESRTSPG-PNLVVIALPNAKT 164

Query: 146 SAPSKXXXXXXXXYKTI----GVYXXXXXXXXXDLEQEQEEVAMCLMMLSKDSGFKGCFS 201
               +         K                  ++E E EEVA+CLMMLS+     G F 
Sbjct: 165 VNLVRRKRSNRTRCKVTSPNSSFSSLNESVSGFEIEHEVEEVALCLMMLSRGVYESGEFK 224

Query: 202 SIADSSDNNSVVLETK 217
           S+ +S + +S+  E K
Sbjct: 225 SVGESMNTDSLSFEAK 240


>30174.m008817 conserved hypothetical protein
          Length = 480

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 74/193 (38%), Gaps = 39/193 (20%)

Query: 2   EPNQKKKLFICKFCNKRYPCGKSLGGHIRIHLXXXXXXXXXXXXXXTDLEDESFVAANGS 61
           +PN K     CK C K + CG++LGGH+R H               +D ED+      G+
Sbjct: 8   QPNFKH---FCKICKKGFGCGRALGGHMRAHGIGDENCQMDDEDPASDWEDK----LGGN 60

Query: 62  NSKRDSELYRLRENPRKTRRFMADSSNSHFLQEKVCKACGKGFQSLKALCGHMACHSKNS 121
               +  +Y LR NP + +              +VC+ CGK F S K+   H  C     
Sbjct: 61  VPPSNKRMYALRTNPNRLKSC------------RVCENCGKEFLSWKSFLEHGKC----- 103

Query: 122 FEDQSETTERLKDQVFDSQSDTETSAPSK---XXXXXXXXYKTIGVYXXXXXXXXXDLEQ 178
               SE  E L   V   +SD E     +              +G +             
Sbjct: 104 ---SSEDAESL---VSSPESDGEDGTQRRGCGWSKRKRSLRAKVGNFNSHCPSS------ 151

Query: 179 EQEEVAMCLMMLS 191
           E+E++A CLMMLS
Sbjct: 152 EEEDLANCLMMLS 164