Jatropha Genome Database

JcCA0313071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0313071.10 + phase: 0 
         (365 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m009085 Alpha-1,4-glucan-protein synthase [UDP-forming], p...   685   0.0  
30138.m003944 Alpha-1,4-glucan-protein synthase [UDP-forming], p...   666   0.0  
30147.m014473 Alpha-1,4-glucan-protein synthase [UDP-forming], p...   648   0.0  
29790.m000807 Alpha-1,4-glucan-protein synthase [UDP-forming], p...   447   e-126
30128.m009012 Alpha-1,4-glucan-protein synthase [UDP-forming], p...   365   e-101
29854.m001124 conserved hypothetical protein                           60   2e-09

>30174.m009085 Alpha-1,4-glucan-protein synthase [UDP-forming],
           putative
          Length = 363

 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/364 (90%), Positives = 343/364 (94%), Gaps = 3/364 (0%)

Query: 2   ARSSIKPTPLLRDELDIVIPTIRNLDFLEMWRAFFEPYHLIIVQDGDPSKTIKVPDGFDY 61
             S+IKPTPLL+DELDIVIPTIRNLDFLEMWR FFE YHLIIVQDGDPSKTIKVP+GFDY
Sbjct: 3   GSSAIKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSKTIKVPEGFDY 62

Query: 62  ELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINAL 121
           ELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYI+TIDDDCFVAKDPSG+EINAL
Sbjct: 63  ELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGQEINAL 122

Query: 122 EQHIKNLLSPSTPHFFNTLYDPYRDGADFVRGYPFSLREGVITAVSHGLWLNIPDYDAPT 181
           EQHIKNLL+PSTP FFNTLYDPYR+GADFVRGYPFSLREGV T VSHGLWLNIPDYDAPT
Sbjct: 123 EQHIKNLLTPSTPLFFNTLYDPYREGADFVRGYPFSLREGVPTVVSHGLWLNIPDYDAPT 182

Query: 182 QLVKPLERNTRYVDAVMTVPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPVGRYDDM 241
           QLVKPLERNTRYVDAVMTVPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPVGRYDDM
Sbjct: 183 QLVKPLERNTRYVDAVMTVPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPVGRYDDM 242

Query: 242 WAGWCMKVICDHMGWGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEQLIPFFQSVVLPK 301
           WAGWCMKVICDHM WGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQE+LIPFFQ+VVLPK
Sbjct: 243 WAGWCMKVICDHMWWGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEELIPFFQAVVLPK 302

Query: 302 ECTTVQKCYIELAKQVKEKFADEDPYFVKLADAMVTWIEAWNELNSPEGKSATGSAKLLN 361
           ECT+VQ+CY+ELAKQVKEK    DPYF+KLADAMVTWIEAW+ELN  EGK     AK  N
Sbjct: 303 ECTSVQQCYVELAKQVKEKLGKTDPYFIKLADAMVTWIEAWDELNL-EGKPV--EAKQPN 359

Query: 362 GTAK 365
           GTAK
Sbjct: 360 GTAK 363


>30138.m003944 Alpha-1,4-glucan-protein synthase [UDP-forming],
           putative
          Length = 361

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/362 (87%), Positives = 337/362 (93%), Gaps = 5/362 (1%)

Query: 4   SSIKPTPLLRDELDIVIPTIRNLDFLEMWRAFFEPYHLIIVQDGDPSKTIKVPDGFDYEL 63
           ++I PTPLL+DELDIVIPTIRNLDFLEMWR FF+PYHLIIVQDGDPSK IKVP+GFDYEL
Sbjct: 5   AAISPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPEGFDYEL 64

Query: 64  YNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQ 123
           YNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYI+TIDDDCFVAKDPSGK+INALEQ
Sbjct: 65  YNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQ 124

Query: 124 HIKNLLSPSTPHFFNTLYDPYRDGADFVRGYPFSLREGVITAVSHGLWLNIPDYDAPTQL 183
           HIKNLL PSTP FFNTLYDPYR GADFVRGYPFSLREGV TAVSHGLWLNIPDYDAPTQL
Sbjct: 125 HIKNLLCPSTPFFFNTLYDPYRTGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQL 184

Query: 184 VKPLERNTRYVDAVMTVPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPVGRYDDMWA 243
           VKPLERNTRYVDAVMT+PKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQP+GRYDDMWA
Sbjct: 185 VKPLERNTRYVDAVMTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWA 244

Query: 244 GWCMKVICDHMGWGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEQLIPFFQSVVLPKEC 303
           GWC KVICDH+G+GVKTGLPYI+HSKASNPFVNLKKEYKGI+WQE+LIPFFQS VLPKEC
Sbjct: 245 GWCTKVICDHLGFGVKTGLPYIYHSKASNPFVNLKKEYKGIYWQEELIPFFQSAVLPKEC 304

Query: 304 TTVQKCYIELAKQVKEKFADEDPYFVKLADAMVTWIEAWNELNSPEGKSATGSAKLLNGT 363
           TTVQKCYIEL+KQV+ K    D YFVKLADAMVTW+EAW+ELN P G     S +L NG 
Sbjct: 305 TTVQKCYIELSKQVRAKLGKIDEYFVKLADAMVTWVEAWDELN-PSGN----SGELPNGA 359

Query: 364 AK 365
           AK
Sbjct: 360 AK 361


>30147.m014473 Alpha-1,4-glucan-protein synthase [UDP-forming],
           putative
          Length = 362

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/354 (85%), Positives = 328/354 (92%), Gaps = 1/354 (0%)

Query: 1   MARSSIKPTPLLRDELDIVIPTIRNLDFLEMWRAFFEPYHLIIVQDGDPSKTIKVPDGFD 60
           MAR +    P L+DELDIVIPTIRNLDFLEMWR FF+PYHLIIVQDGDP+KT++VPDGFD
Sbjct: 1   MARPASHVYPPLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPNKTVRVPDGFD 60

Query: 61  YELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINA 120
           YELYNRND+NR+LGPK++CISFKDSACRCFG++VSKKKYIFTIDDDCFVAKDPSGKEINA
Sbjct: 61  YELYNRNDVNRVLGPKSNCISFKDSACRCFGFLVSKKKYIFTIDDDCFVAKDPSGKEINA 120

Query: 121 LEQHIKNLLSPSTPHFFNTLYDPYRDGADFVRGYPFSLREGVITAVSHGLWLNIPDYDAP 180
           L QHI+NLL+PSTP FFNTLYDPYR+GADFVRGYPFS+R GV TA+SHGLWLNIPDYDAP
Sbjct: 121 LAQHIQNLLTPSTPFFFNTLYDPYREGADFVRGYPFSMRGGVATAISHGLWLNIPDYDAP 180

Query: 181 TQLVKPLERNTRYVDAVMTVPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPVGRYDD 240
           TQLVKPLERNTRYVDAV+T+PKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQP+GRYDD
Sbjct: 181 TQLVKPLERNTRYVDAVLTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDD 240

Query: 241 MWAGWCMKVICDHMGWGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEQLIPFFQSVVLP 300
           MWAGWC KVICDH+  GVKTGLPYIWHSKASNPFVNLKKEYKGI+WQE +IPFFQSV LP
Sbjct: 241 MWAGWCAKVICDHLDLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEDIIPFFQSVALP 300

Query: 301 KECTTVQKCYIELAKQVKEKFADEDPYFVKLADAMVTWIEAWNELNSP-EGKSA 353
           KEC TVQKCYIEL+K VKEK    DPYF KL DAMVTWIEAW+ELNSP EG +A
Sbjct: 301 KECNTVQKCYIELSKLVKEKLGHIDPYFTKLGDAMVTWIEAWDELNSPAEGATA 354


>29790.m000807 Alpha-1,4-glucan-protein synthase [UDP-forming],
           putative
          Length = 260

 Score =  447 bits (1150), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 211/242 (87%), Positives = 227/242 (93%), Gaps = 1/242 (0%)

Query: 109 VAKDPSGKEINALEQHIKNLLSPSTPHFFNTLYDPYRDGADFVRGYPFSLREGVITAVSH 168
           VAKDPS K INALEQHIKNLL PSTP FFNTLYDPYR+GADFVRGYPFSLREGV TAVSH
Sbjct: 10  VAKDPSDKPINALEQHIKNLLCPSTPFFFNTLYDPYREGADFVRGYPFSLREGVPTAVSH 69

Query: 169 GLWLNIPDYDAPTQLVKPLERNTRYVDAVMTVPKGTLFPMCGMNLAFNRELIGPAMYFGL 228
           GLWLNIPDYDAPTQLVKP ERNTRYVDAV+T+PKGTLFPMCGMNLAF+R+LIGPAMYFGL
Sbjct: 70  GLWLNIPDYDAPTQLVKPRERNTRYVDAVLTIPKGTLFPMCGMNLAFDRDLIGPAMYFGL 129

Query: 229 MGDGQPVGRYDDMWAGWCMKVICDHMGWGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQE 288
           MGDGQP+GRYDDMWAGWC+KVICDH+G GVKTGLPYI+HSKASNPFVNLKKEYKGIFWQE
Sbjct: 130 MGDGQPIGRYDDMWAGWCVKVICDHLGLGVKTGLPYIYHSKASNPFVNLKKEYKGIFWQE 189

Query: 289 QLIPFFQSVVLPKECTTVQKCYIELAKQVKEKFADEDPYFVKLADAMVTWIEAWNELNSP 348
           ++IPFFQ+  LPK+CTTVQKCYIELAKQVK+K +  DPYF KLADAMVTWIEAW+ELN P
Sbjct: 190 EIIPFFQAATLPKDCTTVQKCYIELAKQVKDKLSKVDPYFDKLADAMVTWIEAWDELN-P 248

Query: 349 EG 350
            G
Sbjct: 249 SG 250


>30128.m009012 Alpha-1,4-glucan-protein synthase [UDP-forming],
           putative
          Length = 351

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 169/338 (50%), Positives = 239/338 (70%), Gaps = 6/338 (1%)

Query: 15  ELDIVIPTIRN--LDFLEMWRAFFEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRI 72
           ++DIVI  +R     F+  WR+ F  +HLIIV+D D ++ +K+P+GF+ ++Y+++ I R+
Sbjct: 10  DVDIVIGALRPDLTSFMNEWRSIFSRFHLIIVKDPDLNEELKIPEGFNLDVYSKSHIERL 69

Query: 73  LGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSPS 132
            G   S + F   ACR FG+++S+KKYI +ID+DC  AKD  G  I+A+ QHI NL +P+
Sbjct: 70  TGSTTSAL-FSGYACRYFGFIISRKKYIVSIDEDCVPAKDDKGFLIDAVAQHITNLTAPA 128

Query: 133 TPHFFNTLYDPYRDGADFVRGYPFSLREGVITAVSHGLWLNIPDYDAPTQLVKPLERNTR 192
           TP+FFNTLYDPYR+GADFVRGYPFSLR GV  A+S GLWLN+ D+DAPTQ +KP ERN+R
Sbjct: 129 TPYFFNTLYDPYREGADFVRGYPFSLRNGVTCALSCGLWLNLADFDAPTQALKPAERNSR 188

Query: 193 YVDAVMTVPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPVGRY---DDMWAGWCMKV 249
           YVDAV+TVP   + P+ G+N+AF+RE++GP +   L   G+   R+   +D+W G C+KV
Sbjct: 189 YVDAVLTVPARAMMPISGINIAFDREVVGPCVLPALRLAGEGKLRWETMEDIWNGMCVKV 248

Query: 250 ICDHMGWGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEQLIPFFQSVVLPKECTTVQKC 309
           ICDH+G GVKTGLPY+W     N   +LKKE++G+   E+++PFFQS+ LP+   T + C
Sbjct: 249 ICDHLGLGVKTGLPYVWRKDRGNAIESLKKEWEGVKLMEEVVPFFQSIRLPQTAATAEDC 308

Query: 310 YIELAKQVKEKFADEDPYFVKLADAMVTWIEAWNELNS 347
             ELA  VK+K    DP F + ++AM+ W++ W  L S
Sbjct: 309 VAELATSVKQKLGPLDPVFSRASEAMLEWVKLWKALGS 346


>29854.m001124 conserved hypothetical protein
          Length = 54

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/30 (80%), Positives = 27/30 (90%)

Query: 17 DIVIPTIRNLDFLEMWRAFFEPYHLIIVQD 46
          + V PT+RNLDFL+MWR FFEPYHLIIVQD
Sbjct: 20 ETVTPTLRNLDFLDMWRPFFEPYHLIIVQD 49