Jatropha Genome Database

JcCA0312771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0312771.10 + phase: 0 /pseudo
         (737 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013939 signal peptidase I, putative                            531   e-151
29912.m005509 signal peptidase I, putative                            230   2e-60
29648.m001995 signal peptidase I, putative                            114   2e-25
30099.m001623 conserved hypothetical protein                           74   2e-13
27645.m000038 signal peptidase I, putative                             65   1e-10
29701.m000603 mitochondrial inner membrane protease subunit, put...    52   8e-07

>30170.m013939 signal peptidase I, putative
          Length = 831

 Score =  531 bits (1368), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 275/368 (74%), Positives = 301/368 (81%), Gaps = 23/368 (6%)

Query: 1   MAIRVTFTYSGYVAQNIAASAGIRVGNCRSLHECWVRSRIFSSPTVQNTDYEPPATR-TR 59
           MAIRVTFTYSGYVAQ+IA+ AGIRVGNCRSLHEC+VRSRIF+SPT QN D EPPA R +R
Sbjct: 1   MAIRVTFTYSGYVAQSIASCAGIRVGNCRSLHECFVRSRIFASPTNQNVDLEPPAPRPSR 60

Query: 60  DFQSDHRRXXXXXXXXXXXXXXMYSTIAGEIFGDNYKSSLTIGLISLMNSTAGVSNSSCT 119
            FQS   R              +YSTIAGEIFG+N KS + +GLI LM STAGV  S  T
Sbjct: 61  VFQSGGYRKSSTS---------LYSTIAGEIFGNNCKSPIAVGLIELMKSTAGVGVSGST 111

Query: 120 GVLGISPFKAASILPFLQGSRWLPRSEPAPGPK---------SSEIDKGGTVQCVRN--- 167
           GV GISP KA+SILP LQGSRWLP +EP+PG K         SS++D+GGTV+CV+N   
Sbjct: 112 GVFGISPLKASSILPVLQGSRWLPCNEPSPGQKNNEPSTRQNSSDVDRGGTVKCVKNGSS 171

Query: 168 -ESISNNTATVTLEINGKEFDKSGGWLSRVLSFCSEDAKALFTAATVSFLFKSALAEPRS 226
               +  T TVTLEING E DK G WLSRVLS  SEDAKA+FTAATV+FLF+SALAEPRS
Sbjct: 172 SSCCTTATTTVTLEINGNELDKGGSWLSRVLSSFSEDAKAIFTAATVNFLFRSALAEPRS 231

Query: 227 IPSTSMYPTLDVGDRILAEKVSYIFRKPEVSDIVIFKAPPILQEIGYGSGDVFIKRIVAT 286
           IPSTSM PTLDVGDR+LAEKVS+IFR+PEVSDIVIFKAPPILQEIGY SGDVFIKRIVAT
Sbjct: 232 IPSTSMCPTLDVGDRVLAEKVSFIFRQPEVSDIVIFKAPPILQEIGYSSGDVFIKRIVAT 291

Query: 287 AGDIVEVCEGKLYVNGVVQDEDFILEPLAYEMEPVLVPEGYVFVMGDNRNNSFDSHNWGP 346
           AGDIVEV EGKLYVNGV+Q EDFILEPLAYEMEPVLVPEGYVFVMGDNRNNSFDSHNWGP
Sbjct: 292 AGDIVEVREGKLYVNGVIQHEDFILEPLAYEMEPVLVPEGYVFVMGDNRNNSFDSHNWGP 351

Query: 347 LPIQNIVG 354
           LPI+NIVG
Sbjct: 352 LPIKNIVG 359



 Score =  420 bits (1079), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 203/298 (68%), Positives = 247/298 (82%), Gaps = 3/298 (1%)

Query: 440 AWNKFNKERNDFADFVAEIGSTALLDTFKIEGPFDLRVGNQDELSLSLPLNASHTRLKRV 499
           +W ++NK+ +DF + V EIG+ A+LDTFK+EGPFDL +G QD LSLSLPLN SH+ LKR+
Sbjct: 537 SWKRYNKKNDDFENSVKEIGTAAVLDTFKVEGPFDLWIGGQDHLSLSLPLNVSHSSLKRM 596

Query: 500 LVGEGITVEVKGSQELSLLHTVDHSFTVNGSFVISKRKTGFCAFWKPLCMPLHPIYVNGS 559
           LVGEGITVEVK +Q+LS+  T D SF++NG   I+K K+GFC FW+ LCMPL PI V GS
Sbjct: 597 LVGEGITVEVKDAQQLSIFQTFDPSFSMNGRVKINKGKSGFCLFWRQLCMPLLPIRVIGS 656

Query: 560 ASLIAYRTRNSEAPVETTLLSKGTIELLPAKCYTNNAYKNHAQLNPSLSLKINRLGKLLR 619
           ASLIAY+TRN +APVETTLLS+GTI+LL  KCY+++ YKN AQL+  LSLKI+RLGKLLR
Sbjct: 657 ASLIAYKTRNPDAPVETTLLSEGTIKLLSEKCYSDDLYKNQAQLSHFLSLKIDRLGKLLR 716

Query: 620 SFLSDTLRKSWNSGFLRTTVKASTIFRFQLDLEKNIGSNTTLDGLLEDWRTKPTVERVWF 679
           +FL + +     SGFLR+ VKA+TI RFQL+LEKNIGS+ TL   LEDWRT+PT+ERV+F
Sbjct: 717 TFLGNQMEL---SGFLRSNVKAATIIRFQLELEKNIGSSATLHDALEDWRTRPTIERVYF 773

Query: 680 EIMARVEAGKLRLITAKKVRPFVQVDSASWSNLMSNISFTKFPSILVPPEALTLDVKW 737
           E++ARVE  KLR +  KKVRPF+ VDSASWSNLMSN+SFTKFPSILVPPEALTLDVKW
Sbjct: 774 EVLARVEDEKLRPVVVKKVRPFIAVDSASWSNLMSNLSFTKFPSILVPPEALTLDVKW 831


>29912.m005509 signal peptidase I, putative
          Length = 313

 Score =  230 bits (586), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 109/171 (63%), Positives = 131/171 (76%)

Query: 184 KEFDKSGGWLSRVLSFCSEDAKALFTAATVSFLFKSALAEPRSIPSTSMYPTLDVGDRIL 243
           +E  K  G L   L F S+DAK +F A  VS  F+S +AEPR IPS SMYPT DVGDR++
Sbjct: 107 EEVKKKDGLLPEWLDFTSDDAKTVFIALAVSLAFRSFIAEPRYIPSLSMYPTFDVGDRVV 166

Query: 244 AEKVSYIFRKPEVSDIVIFKAPPILQEIGYGSGDVFIKRIVATAGDIVEVCEGKLYVNGV 303
           AEKVSY FRKP  +D+VIFK+PP+LQE+GY   DVFIKR+VA  GDIVEV  GKL VNGV
Sbjct: 167 AEKVSYYFRKPCANDVVIFKSPPVLQEVGYTDNDVFIKRVVAKEGDIVEVRAGKLLVNGV 226

Query: 304 VQDEDFILEPLAYEMEPVLVPEGYVFVMGDNRNNSFDSHNWGPLPIQNIVG 354
            ++E+FILE  +Y+M P+ VPE  VFVMGDNRNNS+DSH WGPLP +NI+G
Sbjct: 227 ERNENFILESPSYDMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIG 277


>29648.m001995 signal peptidase I, putative
          Length = 171

 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/112 (54%), Positives = 72/112 (64%), Gaps = 3/112 (2%)

Query: 208 FTAATVSFLFKSALAEPRSIPSTSMYPTLDVGDRILAEKVSYIFRKPEVSDIVIFKAPPI 267
           F    V FL  S   E R IPS SMYPTL +GDR++ EK SY FR P  +DIVIF+AP  
Sbjct: 17  FLRLFVMFLLWSMCLEIRFIPSASMYPTLRIGDRVIVEKASYYFRAPATNDIVIFRAP-- 74

Query: 268 LQEIGYGSGDVFIKRIVATAGDIVEVCEGKLYVNGVVQDEDFILEPLAYEME 319
            ++ G    DVFIKRIVA AGD+V+V  G LYVNG  Q+EDFI +   Y  E
Sbjct: 75  -KQPGIKEEDVFIKRIVAKAGDLVQVQHGSLYVNGKAQNEDFIAQRPTYTSE 125


>30099.m001623 conserved hypothetical protein
          Length = 431

 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 131/307 (42%), Gaps = 45/307 (14%)

Query: 463 LLDTFKIEGPFDLRVGNQDELSLSLPLNASHTRLKRVLVGEGITVEVKGSQELSLLHTVD 522
           +L  F++ GP ++ V +   + +SLP +     LK+V++ +G  V VKG++ +SL H +D
Sbjct: 134 VLAPFQLAGPMEIWVQDAKNMRISLPHDVDAGVLKKVILADGAAVTVKGARSVSLRHPID 193

Query: 523 HSFTVNGSFVISKRKTGFCAFWKPLCMPLHPIYVNGSASLIAYR------------TRNS 570
                N      + + GF +    L   L        A L++ R            + +S
Sbjct: 194 LPLPFN------RTQNGFASGLLALAEQLRRASRTEGAPLLSLRIVAPTSLTSPSSSSSS 247

Query: 571 EAPVETTLLSKGTIEL-LPAKCYTNNAY--------------KNHAQLNPSLSL---KIN 612
              ++   L+ G +EL  PAK    +A               K+   + P  SL     N
Sbjct: 248 NNRLKLRRLAPGLVELSSPAKSQAVDALTPIELQEAATVLTPKHFTTMWPLTSLNGSNAN 307

Query: 613 RLG--KLLRSFLSDTLRKSWNSGF---LRTTVKASTIFRFQLDLEKNIGSNTTLDGL-LE 666
            LG  KLL S L     K+ + GF   L+  V   T  +   ++EK +    + D     
Sbjct: 308 LLGFEKLLASVLGP---KANDKGFFKLLKADVSTQTFVKIGFEVEKKLKEGDSFDFQGYP 364

Query: 667 DWRTKPTVERVWFEIMARVEAGKLRLITAKKVRPFVQVDSASWSNLMSNISFTKFPSILV 726
            WRTKP   R+ FE++ +V+  K+      +V P +  D+   + LM N++ +K P    
Sbjct: 365 AWRTKPESVRMHFEVLGKVDGEKVIPEKVMQVNPVIIEDTVEANVLMGNVTMSKIPIFHP 424

Query: 727 PPEALTL 733
           P    TL
Sbjct: 425 PSNPFTL 431


>27645.m000038 signal peptidase I, putative
          Length = 225

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 53/187 (28%)

Query: 216 LFKSALAEPRSIPSTSMYPTLDVGDRILAEKVSYIFR------------KPEVSDIVIFK 263
           +F++A+A+   IPS+SM+P L  GD +   +++Y  +            +P   DIV F 
Sbjct: 20  IFRTAVADWNPIPSSSMHPNLLEGDVVFVNRLAYNVKVPLTDIVISPTGEPRRGDIVTFS 79

Query: 264 APPILQEIGYGSGDVFIKRIVATAGDIVEVCEGKLYVNG--------------------- 302
           +P         +G   IKR++A  GD VE+   +L +NG                     
Sbjct: 80  SPV--------NGTRLIKRVIALPGDRVEMRNDELIINGQAAGYTALGHGVENIRGVGDL 131

Query: 303 -------VVQDEDFILEPLA-----YEMEPVLVPEGYVFVMGDNRNNSFDSHNWGPLPIQ 350
                   V D    ++ L       +  PV+VP G   ++GDNR+NS DS   G +P  
Sbjct: 132 AAVQVREAVGDSRHAIQFLPAVRARRDFPPVVVPPGQYMMLGDNRDNSEDSRYIGLVPRA 191

Query: 351 NIVGSIE 357
            ++G  E
Sbjct: 192 LLIGRAE 198


>29701.m000603 mitochondrial inner membrane protease subunit,
           putative
          Length = 170

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 38/163 (23%)

Query: 204 AKALFTAATVSFLFKSALAEPRSIPSTSMYPTLDVG----------DRILAEKVSYIFRK 253
           AK  FT   +        A    +   SM PT + G          D +L EK      +
Sbjct: 11  AKKYFTVGLIGITISDRYASIVPVRGVSMSPTFNPGTSTFWGSFIDDCVLVEKFCLEKYR 70

Query: 254 PEVSDIVIFKAPPILQEIGYGSGDVFIKRIVATAGDIVEVCEGKLYVNGVVQDEDFILEP 313
               D+V+F++P   +E         IKRI+   GD                   +I  P
Sbjct: 71  FSHGDVVVFRSPSNHKE-------KHIKRIIGLPGD-------------------WIGTP 104

Query: 314 LAYEMEPVLVPEGYVFVMGDNRNNSFDSHNWGPLPIQNIVGSI 356
            AY++  V VPEG+ +V GDN  +S DS  +GP+P+  I G +
Sbjct: 105 HAYDV--VKVPEGHCWVEGDNLLSSMDSRYFGPVPLGLISGRV 145