Jatropha Genome Database

JcCA0312091.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0312091.20 + phase: 0 /partial
         (120 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29939.m000548 N(2),N(2)-dimethylguanosine tRNA methyltransferase...   144   1e-35

>29939.m000548 N(2),N(2)-dimethylguanosine tRNA methyltransferase,
           putative
          Length = 422

 Score =  144 bits (362), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 79/101 (78%)

Query: 8   TLSSSPFLLQNPLNVRNFEVRNPKVNKFNCKFELQTERGIVFETGGTFFQHESAKGRDLG 67
            LS S FL + P       +  P+ NKF+C  ELQ ERGI FETG +F++HESAKGRDLG
Sbjct: 3   ALSPSLFLYRPPQYPNKVPIFKPQFNKFHCNSELQVERGIEFETGDSFYRHESAKGRDLG 62

Query: 68  VLAASLYKQSKGNLRVLDAMCGCGIRSCRYLIEAKADFVLA 108
           +LA +LYKQSKG LRV+DAMCGCGIRSCRYLIEA+ADFVLA
Sbjct: 63  ILAGALYKQSKGTLRVIDAMCGCGIRSCRYLIEAEADFVLA 103