Jatropha Genome Database

JcCA0311741.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311741.20 - phase: 0 
         (236 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013841 conserved hypothetical protein                          444   e-125
29701.m000586 conserved hypothetical protein                          114   3e-26
29269.m000243 conserved hypothetical protein                           82   3e-16
29801.m003056 hypothetical protein                                     71   5e-13
55585.m000022 conserved hypothetical protein                           52   2e-07

>30147.m013841 conserved hypothetical protein
          Length = 294

 Score =  444 bits (1142), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/237 (90%), Positives = 221/237 (93%), Gaps = 1/237 (0%)

Query: 1   MQTGD-EDYDLKQMRDMAAAKRRWDAMIREGKVNVLTPREAGYAIQLSSKILLDVRPSVE 59
           MQ GD EDYDLKQMRDMAAAKRRWD +IREGKV VLTPREAGYAIQLS+K LLDVRPSVE
Sbjct: 58  MQAGDDEDYDLKQMRDMAAAKRRWDLLIREGKVKVLTPREAGYAIQLSNKTLLDVRPSVE 117

Query: 60  QKKAWVKGSTWIPIFEVDDRSDIGTLSKKFTNFMMGGWWSGVPTLTYDNQFLSKVEEKFP 119
           +KKAWVKGS+WIPIFEVD+RSDIGTLS K T FMMGGWWSG PTL YDNQFL KVEEKFP
Sbjct: 118 RKKAWVKGSSWIPIFEVDNRSDIGTLSSKITTFMMGGWWSGAPTLAYDNQFLLKVEEKFP 177

Query: 120 KDTDLIVACQRGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVIEGPQPLKFAGIGG 179
           KDTDLIVACQRGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLV EGPQPLKFAGIGG
Sbjct: 178 KDTDLIVACQRGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVTEGPQPLKFAGIGG 237

Query: 180 VSEFLGWTDQQRAAAAKEGWGYRLLFSARLIGVFLVADALFLGAQQVGRYIQDIRSH 236
           VSEFLGWTDQQR AAAKEGWGYRLLFSARL+GV LVADALFLGAQQV RY QDIRSH
Sbjct: 238 VSEFLGWTDQQRVAAAKEGWGYRLLFSARLVGVILVADALFLGAQQVSRYFQDIRSH 294


>29701.m000586 conserved hypothetical protein
          Length = 222

 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 94/161 (58%), Gaps = 2/161 (1%)

Query: 26  MIREGKVNVLTPREAGYAIQLSSKILLDVRPSVEQKKAWVKGSTWIPIFEVDDRSDIGTL 85
           +I+ G +  + P++A  A+     +LLD+RP  E++KA V GS  +P+F  D  +   TL
Sbjct: 48  LIQSGAIKPIVPKDAATAMSSEGFVLLDIRPVWEREKARVAGSLHVPLFVQDMDNSPLTL 107

Query: 86  SKKFTNFMMGGWWSGVPTLTYDNQFLSKVEEKFP-KDTDLIVACQRGLRSLAACELLYNA 144
            KK+ +F   G W+G      +  FL  VE   P KD  ++VAC  GLRS+ A   LY  
Sbjct: 108 LKKWVHFGYIGLWTGQNFTMINPDFLRLVETSIPNKDAKILVACGEGLRSMMAAFKLYEG 167

Query: 145 GYRNLFWVQGGLEAAEEEDL-VIEGPQPLKFAGIGGVSEFL 184
           GY+NL W+ GG   + ++D  V+EGP+ L++A IGGVS + 
Sbjct: 168 GYKNLGWLAGGFNRSGDDDFPVVEGPEKLQYATIGGVSYYF 208


>29269.m000243 conserved hypothetical protein
          Length = 235

 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 85/174 (48%)

Query: 7   DYDLKQMRDMAAAKRRWDAMIREGKVNVLTPREAGYAIQLSSKILLDVRPSVEQKKAWVK 66
           +Y   + RD+              +VN ++  EA   +      +LDVR   +  +A +K
Sbjct: 23  EYGTHRARDIPRKLSNSREFGIRAEVNYVSGEEAKKLVAAEGYEILDVRDRTQYDRAHIK 82

Query: 67  GSTWIPIFEVDDRSDIGTLSKKFTNFMMGGWWSGVPTLTYDNQFLSKVEEKFPKDTDLIV 126
               +P+F  +  +D+GT+ K+  +    G + G+     + +F+  V+ +F  D+ L++
Sbjct: 83  SCYHVPLFIENKDNDLGTIIKRTVHNNFSGLFFGLAFTKPNPEFVESVKNQFSPDSKLLL 142

Query: 127 ACQRGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVIEGPQPLKFAGIGGV 180
            CQ GLRS AA   L  AG++N+  +  GL++ +      EG   L+ AG GG+
Sbjct: 143 VCQEGLRSTAAANKLEQAGFQNVACITSGLQSVKPGTFDSEGSSELQNAGKGGL 196


>29801.m003056 hypothetical protein
          Length = 82

 Score = 70.9 bits (172), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 47/95 (49%), Gaps = 40/95 (42%)

Query: 13  MRDMAAAKRRWDAMIREGKVNVLTPREAGYAIQLSSKILLDVRPSVEQKKAWVKGSTWIP 72
           MRD AAAKRRWD +                                    AWVKGS+WI 
Sbjct: 1   MRDTAAAKRRWDLL------------------------------------AWVKGSSWIL 24

Query: 73  IFEVDDRSDIGTLSKKFTNFMMGGWWSGVPTLTYD 107
           I +VD+R DIGTL    T FMMGGWWSG PTL YD
Sbjct: 25  ISKVDNRYDIGTL----TTFMMGGWWSGAPTLAYD 55


>55585.m000022 conserved hypothetical protein
          Length = 235

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 20/143 (13%)

Query: 29  EGKVNVLTPREAGYAIQLSSKILLDVRPSVEQKKAWVKGSTWIPIFEVDDRSDIGTLSKK 88
           + KV  +  +EA    Q ++ ++LDVRP  E K+A   G+  + I+ +        ++++
Sbjct: 84  QKKVRSVDVKEALRLQQENNFVILDVRPEAEFKEAHPPGAINVQIYRLIKEWTAWDIARR 143

Query: 89  FTNFMMGGWWSGVPTLTYDN-QFLSKVEEKFPKDTDLIVACQRG--------------LR 133
              F   G +SG    T +N +FL  V+ K  K+  +IVAC  G               R
Sbjct: 144 -AAFAFFGIFSG----TEENPEFLQIVDSKIDKNAKIIVACSSGGTMKPSQNLPEGQQSR 198

Query: 134 SLAACELLYNAGYRNLFWVQGGL 156
           SL A  LL   GY N+F+++GGL
Sbjct: 199 SLIAAYLLVLNGYTNVFYLEGGL 221