Jatropha Genome Database

JcCA0311651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311651.10 + phase: 0 
         (485 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29868.m000353 dihydropyrimidinase, putative                           833   0.0  
29851.m002399 allantoinase, putative                                   80   1e-15

>29868.m000353 dihydropyrimidinase, putative
          Length = 503

 Score =  833 bits (2152), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/452 (88%), Positives = 420/452 (92%), Gaps = 6/452 (1%)

Query: 28  NQFCEVRSGYDEAGCGIPXXXXXXXXXXXXX-TVVNAHQQEVADVFVEDGIIVVVKPNIK 86
           NQFCEV SGY E GCGI               TVVNAH QEVADV+VEDG+IV VKPN+K
Sbjct: 31  NQFCEVGSGYGETGCGIQSSSSSSSKILIKGGTVVNAHSQEVADVYVEDGVIVAVKPNLK 90

Query: 87  VGDDVYVIDASGKFVMPGGIDPHTHLAMEFMSTETIDDFFSGQAAALAGGTTMHIDFVIP 146
           V DDV V+DA+GKFVMPGGIDPHTHLAM+FM T+TIDDFFSGQAAALAGGTTMHIDFVIP
Sbjct: 91  VSDDVIVLDATGKFVMPGGIDPHTHLAMDFMGTQTIDDFFSGQAAALAGGTTMHIDFVIP 150

Query: 147 LNGSLVAGFEAYKKKAKKSCMDYGFHMAVTKWDEVVSREMEIMVKENGINSFKFFMAYKG 206
           +NGSL+AG+EAY+KKAKKSCMDYGFHMA+TKWDEV+SREMEIMVKE GINSFKFF+AYKG
Sbjct: 151 VNGSLMAGYEAYEKKAKKSCMDYGFHMAITKWDEVISREMEIMVKEKGINSFKFFLAYKG 210

Query: 207 SLMINDDLLLEGLKQCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVLV 266
           SLMIND+LLLEG K+CKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVL 
Sbjct: 211 SLMINDELLLEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVL- 269

Query: 267 VLQLEGEATARAIRLASFINTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDD 326
               EGEATARAIRLASF+NTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDD
Sbjct: 270 ----EGEATARAIRLASFVNTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDD 325

Query: 327 SKLWDPDFTTASKYVMSPPIRPSGHDKALQAALSTGVLQLVGTDHCVFNSTQKAFGIDDF 386
           SKLWDPDFTTASKYVMSPPIR SGHDKALQAALSTG+LQLVGTDHCVFNSTQKAFGIDDF
Sbjct: 326 SKLWDPDFTTASKYVMSPPIRSSGHDKALQAALSTGILQLVGTDHCVFNSTQKAFGIDDF 385

Query: 387 RKIPNGVNGIEERMHLLWDTMVESGQISVTDFVRVTSTECARIFNIYPRKGAILAGSDAD 446
           RKIPNGVNGIEERMHL+WDTMVESGQISVTDFVRVTSTECARIFNIYPRKGAILAGSDAD
Sbjct: 386 RKIPNGVNGIEERMHLVWDTMVESGQISVTDFVRVTSTECARIFNIYPRKGAILAGSDAD 445

Query: 447 IIILNPNSSFEISARSHHSRTDTNVYEGRRGK 478
           IIILNPNSSFEISARSHHS TDTNVYEGRRGK
Sbjct: 446 IIILNPNSSFEISARSHHSLTDTNVYEGRRGK 477


>29851.m002399 allantoinase, putative
          Length = 500

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 179/417 (42%), Gaps = 61/417 (14%)

Query: 74  EDGIIVVVKP-----NIKVGDDVYVIDASGKFVMPGGIDPHTHLAMEFMSTETIDDFFSG 128
           E  I+ VVK      N K G   ++ID     VMPG ID H HL  +       + F SG
Sbjct: 62  EGNIVSVVKEEDWHVNFKRG---HMIDYGEVVVMPGFIDVHAHL--DDPGRTEWEGFPSG 116

Query: 129 QAAALAGGTTMHIDFVIPLNG--------SLVAGFEAYKKKAKKSCMDYGFHMAVTKWDE 180
             AA AGG T  ID  +PLN         +L    EA +K      +D GF   +   + 
Sbjct: 117 TKAAAAGGITTLID--MPLNSDPSTVSVETLRLKLEAAEKNI---YVDVGFWGGLVPENA 171

Query: 181 VVSREMEIMVKENGINSFKFFMAYKGSLMINDDLLLEGLKQCKSLGALA------MVHAE 234
                +E ++   G+   K FM   G   IND  + +     + L  LA      +VHAE
Sbjct: 172 FNGSSLEALLSA-GVLGLKSFMCPSG---INDFPMTDATHIKEGLSVLAKYRRPLLVHAE 227

Query: 235 NGDAVFEGQKRMIELGITGPEGHAL---SRPPVLVVLQLEGEATARAIRLAS---FINTP 288
               + +  +  IE G+  P  ++    +RP          EA  R +   S    I  P
Sbjct: 228 ----IQQDSESYIEDGMDDPRHYSTYLKTRPASW------EEAAIRELLTVSKDTRIGGP 277

Query: 289 -----LYVVHVM-SIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTTASKYVM 342
                L++VH+  S  +++ + +A++SG  V  E     L     ++ D D    +++  
Sbjct: 278 AEGSHLHIVHLSDSGSSLQLLKQAKRSGDSVTVETCPHYLAFSAEEIQDGD----TRFKC 333

Query: 343 SPPIRPSGHDKALQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNGIEERMHL 402
           +PPIR + + +AL  AL  G + ++ +DH       K     +F +   G++ ++    +
Sbjct: 334 APPIRDATNKEALWKALLKGDIDMLSSDHSPTVPELKLLNEGNFLRAWGGISSLQFVFPV 393

Query: 403 LWDTMVESGQISVTDFVRVTSTECARIFNIYPRKGAILAGSDADIIILNPNSSFEIS 459
            W    + G +++       S   A++      KG I+ G  ADI+I +PN+ F++S
Sbjct: 394 TWTYGRKYG-VTLEQLALWWSERPAKLAG-QESKGGIVVGKHADIVIWDPNAEFDLS 448