Jatropha Genome Database

JcCA0311501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311501.10 - phase: 0 /partial
         (215 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29883.m001970 ammonium transporter, putative                          338   1e-93
29848.m004664 ammonium transporter, putative                          288   2e-78
29784.m000373 ammonium transporter, putative                          233   4e-62
29826.m000743 ammonium transporter, putative                          229   1e-60
29601.m000429 ammonium transporter, putative                          211   2e-55

>29883.m001970 ammonium transporter, putative
          Length = 479

 Score =  338 bits (866), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 167/192 (86%), Positives = 181/192 (94%), Gaps = 1/192 (0%)

Query: 1   MSTTGNLPSGLMHDDASPEWMNKADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNS 60
           MST  NLPSGLM DDASP+W++KADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNS
Sbjct: 1   MSTQWNLPSGLMPDDASPDWLSKADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNS 60

Query: 61  AFMALYAFAAVLVCWVGWGYQMSFGNNKFAPFLGKPGVSLDQKFLLDQGFAGKFPSATMV 120
           AFMALYAFAAVLVCWVGWGY+M+FG++   PFLG+P V++DQK+LL   F GKFP+ATM+
Sbjct: 61  AFMALYAFAAVLVCWVGWGYRMAFGHDML-PFLGRPDVAMDQKYLLGIAFLGKFPNATMI 119

Query: 121 YFQFVFAAITLILVAGALLGRMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLAKMGIID 180
           YFQFVFAAITLILVAGALLGRMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLAKMGIID
Sbjct: 120 YFQFVFAAITLILVAGALLGRMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLAKMGIID 179

Query: 181 YSGGYVIHLASG 192
           YSGGYVIHL+SG
Sbjct: 180 YSGGYVIHLSSG 191


>29848.m004664 ammonium transporter, putative
          Length = 492

 Score =  288 bits (736), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 140/187 (74%), Positives = 162/187 (86%), Gaps = 1/187 (0%)

Query: 6   NLPSGLMHDDASPEWMNKADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNSAFMAL 65
           +LPSGL  D+++P WM+KADNAWQLTAAT VGLQS+PGL+ILYG  VKKKWAVNSAFM L
Sbjct: 18  DLPSGLAFDESTPPWMSKADNAWQLTAATFVGLQSIPGLMILYGGGVKKKWAVNSAFMVL 77

Query: 66  YAFAAVLVCWVGWGYQMSFGNNKFAPFLGKPGVSLDQKFLLDQGFAGKFPSATMVYFQFV 125
           YAFA VL CWV WGY+MSFG  +  PF GK  ++LDQKFL DQ F GKFP+ATMV+FQ V
Sbjct: 78  YAFACVLFCWVTWGYRMSFGT-ELVPFWGKANIALDQKFLFDQAFFGKFPTATMVFFQSV 136

Query: 126 FAAITLILVAGALLGRMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLAKMGIIDYSGGY 185
           FAAITLIL+AGALLGRMNF+AWM+FVPLWLTFSYT  A+SIWCP+G+L K G+IDYSGGY
Sbjct: 137 FAAITLILIAGALLGRMNFYAWMMFVPLWLTFSYTFVAFSIWCPSGFLFKNGLIDYSGGY 196

Query: 186 VIHLASG 192
           VIHL++G
Sbjct: 197 VIHLSAG 203


>29784.m000373 ammonium transporter, putative
          Length = 469

 Score =  233 bits (595), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 131/187 (70%), Positives = 153/187 (81%), Gaps = 3/187 (1%)

Query: 6   NLPSGLMHDDASPEWMNKADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNSAFMAL 65
           +LPSGL  D++SPEW +KADNAWQLTA T+V LQSVPGLVILYGS+VKKKWAVNSAFMA 
Sbjct: 10  SLPSGLRPDESSPEWNSKADNAWQLTATTMVCLQSVPGLVILYGSMVKKKWAVNSAFMAF 69

Query: 66  YAFAAVLVCWVGWGYQMSFGNNKFAPFLGKPGVSLDQKFLLDQGFAGKFPSATMVYFQFV 125
           YAFAAVLVCWV WG+ MSFG  K +P +GKP V+L Q F+L +   G  P A  V +QF 
Sbjct: 70  YAFAAVLVCWVLWGHHMSFG-TKISPLVGKPNVALPQHFVLSRSKLGHVPMADYVLYQFA 128

Query: 126 FAAITLILVAGALLGRMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLAKMGIIDYSGGY 185
           FAAIT+IL+AG+LLGRMN +AWMLFVPLWLTFSYT+ A+SIW   G+L K  IIDY+GGY
Sbjct: 129 FAAITVILLAGSLLGRMNIYAWMLFVPLWLTFSYTVGAFSIWG-GGFLEKH-IIDYAGGY 186

Query: 186 VIHLASG 192
           VIHL+SG
Sbjct: 187 VIHLSSG 193


>29826.m000743 ammonium transporter, putative
          Length = 489

 Score =  229 bits (583), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 123/195 (63%), Positives = 146/195 (74%), Gaps = 20/195 (10%)

Query: 16  ASPEWMNKADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVLVCW 75
           A P W+NK DN+WQ+ +ATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAV++CW
Sbjct: 20  AVPVWLNKGDNSWQMISATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICW 79

Query: 76  VGWGYQMSFGNNKFAPFLGKPGVSLDQKFLLDQGFAGK------------------FPSA 117
           V W Y+MSFG +K  PF GK G +L QKFL++Q                       +P A
Sbjct: 80  VTWAYKMSFG-DKLLPFWGKAGPALGQKFLIEQAALPATTHYYNNGEVETAMATPFYPMA 138

Query: 118 TMVYFQFVFAAITLILVAGALLGRMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLAKMG 177
           +MV+FQ VFAAITLIL+ G++LGRMN  AWM FVPLWLTFSYT+ A+S+W   G+L   G
Sbjct: 139 SMVWFQCVFAAITLILLGGSVLGRMNIKAWMAFVPLWLTFSYTVGAFSLWG-GGFLFHWG 197

Query: 178 IIDYSGGYVIHLASG 192
           +IDYSGGYVIHL+SG
Sbjct: 198 VIDYSGGYVIHLSSG 212


>29601.m000429 ammonium transporter, putative
          Length = 477

 Score =  211 bits (538), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 116/193 (60%), Positives = 141/193 (73%), Gaps = 18/193 (9%)

Query: 16  ASPEWMNKADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVLVCW 75
           A P W+NK DNAWQ+TA+ LV  QS+PGLVILY SIVKKKWAVNSAFMALYAFAAVL+CW
Sbjct: 11  AVPPWLNKGDNAWQMTASVLVATQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICW 70

Query: 76  VGWGYQMSFGNNKFAPFLGKPGVSLDQKFLL------------DQG----FAGKFPSATM 119
           V   ++M+FG ++  PF GK   +L Q +L             +QG     +  FP AT+
Sbjct: 71  VLLCFRMAFG-DELLPFWGKGAPALGQNYLTGRARIPESTHKNEQGQSVTVSPYFPMATL 129

Query: 120 VYFQFVFAAITLILVAGALLGRMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLAKMGII 179
           VYFQF FAAITLIL+AG++L RMN  AWM FVPLWL FSYT+ A+S+W   G+L + G+I
Sbjct: 130 VYFQFTFAAITLILLAGSVLARMNIKAWMAFVPLWLIFSYTVGAFSLWG-GGFLYQWGVI 188

Query: 180 DYSGGYVIHLASG 192
           DYSGGYVIHL+SG
Sbjct: 189 DYSGGYVIHLSSG 201